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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100014g37.9295.mrna |
| Orig protein id | gnl|cribi|Naga_100014g37.9295 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:913097..914520 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4559 ID=rna4559|Name=rna4559|organism=Nannochloropsis gaditana|type=mRNA|length=1396bp
AGCGAGTTAACTACGGCAAGTATGCAGCCGCCTGTTTCTATCAACATGTG
CGGTGTGAGGGTCAAGATTGTTAATCGCCTTTTCCCCTACTTCTTATATC
TTGAAAAATGTTACCCTGCAGAGAGCAGCCCTGCCCAGTATCCATTCACT
CCTTGGTCGAGCCGCCGGCAGCTAGCATTAGGAGGAGCCCCCAAAATAGT
TCAGTTCGTGAAGTTCGCACATACAGACCACGACCACCCCAAGTCAATTA
TAAATCAATCAAGTGATAATAAAGAGCGGGGGTATCATGCAGATAACAAG
AGGAGGGAAAATTTTCACTACGCAGGATGGGAGGAAAGGGCAGCACAAAA
AAGTGACGAACATCAGGAAGCGCAAACATCCCGCTACGAATCTTGCCGCG
GCCGTTGAGGATGTGGCACCACAGCAACATGTATCCCTTACTCCCCGTCA
TTATACTGTTTCAATAGCAGTGGCGGGCTCGATAGTACTCAATGCGCAAT
CACCGGAATTGCGGACGTATTTAGTAGGGGAGATCGCCCGAGCGGCCGCA
ATTTTTCAAGTAGATGAGATTGTGGTGTTTGGGGACAGCTCAGGAGCGAG
TCCCTCCTATAATTGGGGGGATCCCAACTTGTTCTTTGGGCGCCTTTTAC
AGTACATCGAAACTCCTCAGTATCTTCGCAAGGCCATCTTCCCACATCAC
TCGGACCTTCGTTTTGCAGGCATTCTGAACCCTCTAGATGCCCCTCACCA
CCCGCGGGCCCACGAGAACCTCGTGTATCGTGAAGGTGTAACGGTTGATA
CCCCCGCGAACAGCGCTGGAGGGTCTCTGGTCAACGTGGGATTACGCAAC
TATGTGCACTTAGACCGTCGCCTCAAGCCGGGAGTCCGCGTGACTGTAAA
GCTAATCTCCTCCGACCCTGTCGGCGGCTCGGGACAGAAGCATCAACAGC
GTCCTCATGAGTTGTCCGGTGTTGCGGTTTCTCCCGCAGCTCCTCGTGAG
ACCGCGGGGCTCTACTGGGGCTACACCACCCGCTTAGCCAAGAATCTGAC
CGAGGTCTTCGCGCAGAGCCCTTTCAAGGGAGGCTACGATGTGACTGTGG
GCACATCGGAACGAGGCCATCAAAGCATTGAGGACGCAGACTTTGTATTG
CCCGCCTTCAAGCACCTTCTGGTGGTGTTCGGAGGGGTGGCGGGCCTGGA
GGCCTGTGTGGAGGGGACGGCGGAGCTTGGTCTGTCCGCGAGCGAGACGC
ACACACTCTTCGACGTATGGCTGAACACGTGTCCCGACCAGGGGAGCCGA
ACCATCCGTACCGAGGAGGCTGTGCCCATCACCATGGCTCGGCTGCGGCC
CTTCATCGTCAAGGCTGGAAAGAACGATTAGATGAGAACCCTTAGG back to topprotein sequence of rna4559 >rna4559-protein ID=rna4559-protein|Name=rna4559|organism=Nannochloropsis gaditana|type=polypeptide|length=341bp
MTLGTEGMKITSLRLSPALGHKMGRHRSFSAGVSSTSNTLPLHRISVSIS
SWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRW
PKLYPVPWLEHVREEHSRCVLHVTEVQTGRVLERFLMDSNVVHHDSLDVC
ALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRK
ADDGSLSDGEDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHY
KDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPPLEDGAEA
TQTGSGLAGREVELRKAIAGNAGFIYGQQLIDLLEKVSDNK back to topmRNA from alignment at CM002463.1:913097..914520- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna4559 ID=rna4559|Name=rna4559|organism=Nannochloropsis gaditana|type=mRNA|length=1424bp|location=Sequence derived from alignment at CM002463.1:913097..914520- (Nannochloropsis gaditana)
ATCTTTCATTCCTTGCTCGGGAAGCTTGAAATAGGACGATACACTCAGAA
TAGTACGGTAATGAGAGGCCTTGGTTCTTATTCCCGGACTCGTCATGCTA
ATATATCCCTGTCGGACGCCGTGTGAAGGCGTGGTGAGGCACCAGGAGGT
TAAACACAGCAGGCGACGACACCATCCTATTGCTTCTGCTGCTTCGATGC
GGGCGCTTTCGAAGCCAGCATAGGGCATGGCACTCCCCAACTTCCGAGTC
TTCACATCTTATTCGTGAAAAAATATCCGTCAACAGGATTCAGGCGAGTG
AATGCACGCTGGTCAATGACCCTCGGAACCGAAGGAATGAAAATAACCTC
CCTGCGCCTATCACCGGCACTGGGACACAAAATGGGCAGACACCGGTCCT
TCAGCGCAGGAGTCAGCTCGACCAGCAATACCTTGCCCTTACATCGCATA
AGTGTGTCTATTAGTTCCTGGTTCCGACTGGCCGATCAGGGCATGTTGCA
ACACGAGATGCTCTGCCGTGGCACGGCTTTTGGTGTACAATTGCCACAAC
GGAAAAGCAAGCATGCCCCGTTGATTTTCTTTACATGCTCTCATGTGGCG
GCGCCTTGGCGTTGGCCCAAGCTATATCCAGTACCTTGGCTGGAGCACGT
GCGGGAGGAGCACTCACGATGTGTGCTGCATGTGACAGAAGTGCAGACAG
GCCGGGTACTAGAACGGTTTTTGATGGATTCGAACGTGGTTCACCATGAT
TCGTTGGATGTTTGTGCTCTTCGGCTACAAGACCAAGAAAAGGTGATGCA
GCGGATGGCGAAGCATGGCTTGCCGTTGCACCCACTGGTCTTGAGCGAGA
GGGTCCCGTCCTCGGGCAACGCAGTCGTGTCCCCCGGTTTCGCCGTGGAG
CGCCTGCAAAGGAAGGCAGATGATGGGAGTTTGAGCGATGGAGAGGATGG
AGAGTACACAGAGGTTGTGGAGGATTTGGAGACCGGAGGATCGGTACGGC
TTGATCTCAGGACGGACCAGGAGCCTCGCCGCTTGTGTGTGAGTCTGGGC
ACGGTCAGCCACTACAAGGACAGGCAAGCTCGGGGGTTTGCCGTCATGGA
CCGTGTGCTGGGGGACGGCGTGTGTGGTGCCCCTTTGTTGGATTTGCGGC
AAGAGGGTCGATGTGTGGGGCTTGTGGAAGGCATAGTGCCCCCTTTGGAG
GACGGGGCGGAGGCCACGCAGACAGGGTCGGGCCTGGCGGGGCGGGAGGT
AGAGCTTCGAAAGGCAATTGCTGGGAATGCCGGTTTTATTTATGGTCAGC
AATTGATTGACTTGCTGGAAAAAGTCAGTGACAATAAATAAGTAAAATCA
GAAATAAAGCAGAATGCTCCTAAGGGTTCTCATCTAATCGTTCTTTCCAG
CCTTGACGATGAAGGGCCGCAGCC back to topCoding sequence (CDS) from alignment at CM002463.1:913097..914520- >rna4559 ID=rna4559|Name=rna4559|organism=Nannochloropsis gaditana|type=CDS|length=1026bp|location=Sequence derived from alignment at CM002463.1:913097..914520- (Nannochloropsis gaditana)
ATGACCCTCGGAACCGAAGGAATGAAAATAACCTCCCTGCGCCTATCACC
GGCACTGGGACACAAAATGGGCAGACACCGGTCCTTCAGCGCAGGAGTCA
GCTCGACCAGCAATACCTTGCCCTTACATCGCATAAGTGTGTCTATTAGT
TCCTGGTTCCGACTGGCCGATCAGGGCATGTTGCAACACGAGATGCTCTG
CCGTGGCACGGCTTTTGGTGTACAATTGCCACAACGGAAAAGCAAGCATG
CCCCGTTGATTTTCTTTACATGCTCTCATGTGGCGGCGCCTTGGCGTTGG
CCCAAGCTATATCCAGTACCTTGGCTGGAGCACGTGCGGGAGGAGCACTC
ACGATGTGTGCTGCATGTGACAGAAGTGCAGACAGGCCGGGTACTAGAAC
GGTTTTTGATGGATTCGAACGTGGTTCACCATGATTCGTTGGATGTTTGT
GCTCTTCGGCTACAAGACCAAGAAAAGGTGATGCAGCGGATGGCGAAGCA
TGGCTTGCCGTTGCACCCACTGGTCTTGAGCGAGAGGGTCCCGTCCTCGG
GCAACGCAGTCGTGTCCCCCGGTTTCGCCGTGGAGCGCCTGCAAAGGAAG
GCAGATGATGGGAGTTTGAGCGATGGAGAGGATGGAGAGTACACAGAGGT
TGTGGAGGATTTGGAGACCGGAGGATCGGTACGGCTTGATCTCAGGACGG
ACCAGGAGCCTCGCCGCTTGTGTGTGAGTCTGGGCACGGTCAGCCACTAC
AAGGACAGGCAAGCTCGGGGGTTTGCCGTCATGGACCGTGTGCTGGGGGA
CGGCGTGTGTGGTGCCCCTTTGTTGGATTTGCGGCAAGAGGGTCGATGTG
TGGGGCTTGTGGAAGGCATAGTGCCCCCTTTGGAGGACGGGGCGGAGGCC
ACGCAGACAGGGTCGGGCCTGGCGGGGCGGGAGGTAGAGCTTCGAAAGGC
AATTGCTGGGAATGCCGGTTTTATTTATGGTCAGCAATTGATTGACTTGC
TGGAAAAAGTCAGTGACAATAAATAA back to top
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