EWM26118.1, cds4547 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM26118.1 vs. NCBI_GenBank
Match: gi|585108112|gb|EWM26118.1| (hypothetical protein Naga_100014g37 [Nannochloropsis gaditana]) HSP 1 Score: 697.197 bits (1798), Expect = 0.000e+0 Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0
Query: 1 MTLGTEGMKITSLRLSPALGHKMGRHRSFSAGVSSTSNTLPLHRISVSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRWPKLYPVPWLEHVREEHSRCVLHVTEVQTGRVLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPPLEDGAEATQTGSGLAGREVELRKAIAGNAGFIYGQQLIDLLEKVSDNK 341
MTLGTEGMKITSLRLSPALGHKMGRHRSFSAGVSSTSNTLPLHRISVSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRWPKLYPVPWLEHVREEHSRCVLHVTEVQTGRVLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPPLEDGAEATQTGSGLAGREVELRKAIAGNAGFIYGQQLIDLLEKVSDNK
Sbjct: 1 MTLGTEGMKITSLRLSPALGHKMGRHRSFSAGVSSTSNTLPLHRISVSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRWPKLYPVPWLEHVREEHSRCVLHVTEVQTGRVLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPPLEDGAEATQTGSGLAGREVELRKAIAGNAGFIYGQQLIDLLEKVSDNK 341
BLAST of EWM26118.1 vs. NCBI_GenBank
Match: gi|553196453|ref|XP_005856346.1| (hypothetical protein NGA_2002400, partial [Nannochloropsis gaditana CCMP526] >gi|422292700|gb|EKU20002.1| hypothetical protein NGA_2002400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 91.6633 bits (226), Expect = 5.835e-18 Identity = 72/257 (28.02%), Postives = 112/257 (43.58%), Query Frame = 0
Query: 43 HRISVSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRWPKLYPVPWLEHVREEH--SRCVLHVTEV---QTGRVLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLD-LRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPP 293
+R +S+SS+F+L +QGM +E+L +GT F + P S +I +CSHV AP+RW + + PWLE V++EH R + E + GR ++ HH LD+C + L+D +V V +R +DGE E+L G D + D++ + + + + D Q R +A L G+ G P+LD GR GL +GI+PP
Sbjct: 10 YRTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTK--VILLSCSHVLAPYRWQQYFKKPWLEFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLED-----------------------------GIVETCALVPYDER----------DDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLD--GSGRFCGLFQGILPP 223
BLAST of EWM26118.1 vs. NCBI_GenBank
Match: gi|585108074|gb|EWM26080.1| (hypothetical protein Naga_100014g38 [Nannochloropsis gaditana]) HSP 1 Score: 92.0485 bits (227), Expect = 1.690e-17 Identity = 76/284 (26.76%), Postives = 124/284 (43.66%), Query Frame = 0
Query: 16 SPALGHKMGRHRSFSAGVSSTSNTLPLHRISVSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRWPKLYPVPWLEHVREEH--SRCVLHVTEV---QTGRVLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLD-LRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPP 293
+P+ G + G S G+ + ++ +R +S+SS+F+L +QGM +E+L +GT F + P S +I +CSHV AP+RW + + PWL+ V++EH R + E + GR ++ HH LD+C + L+ N +V V +R +DGE E+L G D + D++ + + + + D Q R +A L G+ G P+LD GR GL +GI+PP
Sbjct: 33 TPSHGVRQGYISMTSPGIRTKASH---YRTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTK--VILLSCSHVLAPYRWQQYFKKPWLKFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLE-----------------------------NGIVETCALVPYDER----------DDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLD--GSGRFCGLFQGILPP 270
BLAST of EWM26118.1 vs. NCBI_GenBank
Match: gi|695417785|ref|XP_009527213.1| (hypothetical protein PHYSODRAFT_346301 [Phytophthora sojae] >gi|695468036|ref|XP_009539771.1| hypothetical protein PHYSODRAFT_566735 [Phytophthora sojae] >gi|348664958|gb|EGZ04795.1| hypothetical protein PHYSODRAFT_566735 [Phytophthora sojae] >gi|348678338|gb|EGZ18155.1| hypothetical protein PHYSODRAFT_346301 [Phytophthora sojae]) HSP 1 Score: 85.8853 bits (211), Expect = 1.171e-15 Identity = 80/289 (27.68%), Postives = 124/289 (42.91%), Query Frame = 0
Query: 44 RISVSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRWPKLYPVP--WLEHVREEHSRCVLHVTEVQTGR--VLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDG-SLSDGEDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHYKDRQARG--FAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPPLEDGAEATQTGSGLAGREVELRKAIAGNAGFI 325
R +S+++ F L QGM + L G+A ++ Q S + L TC HVA PW +P+ + WL+ V E+ R L + V + VL + V H+S D+ L L D + Q A+ L LH L L + G+A++ G R+ ++G L G DG H+ R + G FA +L +G+CG ++D + CVG+VEGIVP + G + A ++R+A+AG+ FI
Sbjct: 7 RAVLSLTTRFCLPHQGMATLDYLSSGSAVVLRGSQDASDSSSLAVATCQHVACPWLFPQYFTATWDWLQFVSEDFVRHSLQLLAVDAPKPEVLLELPLARKVQTHESRDLALLTLADADAWKQ--AEESLGLHALTLQQTPAQRGDALLFSG------HRQLEEGLQLPKGVDG------------------------------------HFVGRSSSGQEFAWSRELLEEGMCGGAVIDAAGD-ECVGIVEGIVPSIGQGDDEPSLHDREAHAAWQMRQALAGHVAFI 250
BLAST of EWM26118.1 vs. NCBI_GenBank
Match: gi|673014604|ref|XP_008861263.1| (hypothetical protein H310_00307 [Aphanomyces invadans] >gi|574482861|gb|ETW09852.1| hypothetical protein H310_00307 [Aphanomyces invadans]) HSP 1 Score: 81.6481 bits (200), Expect = 3.100e-14 Identity = 66/257 (25.68%), Postives = 110/257 (42.80%), Query Frame = 0
Query: 47 VSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRWPKLYPVPWLEHVREEHSRCVLHVTEVQTGRVLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPPLEDGAEATQT 303
+++++ FRL +GM E+L RG+A V K + TC+HVA PWR+ YP WLEHV E + L + EV +G + + + H + D+ L LQ +++++ +V+ D + + E+ E LE G ++L+ P + G + FA ++VL G+CG +Q + VGL+EGIVP +E+ + A +T
Sbjct: 8 LALTTLFRLPHEGMQAFEVLSRGSAMLVHRTGAKRNPTHVHVLTCAHVACPWRYSSYYPHDWLEHVDENFVKHTLALREVGSGATKWEVDLLPHTLVHPTRDLALLELQ-----------------------------SSILTNDDSVDPFDL---DTAFAVAEN-------EPLEFHGHIQLNETAPILPESVA---GAYFWLNPTTKQAFASSEKVLAQGMCGGAAFT-KQGRKVVGLIEGIVPVVENASPAYKT 221
BLAST of EWM26118.1 vs. NCBI_GenBank
Match: gi|698824833|ref|XP_009845445.1| (hypothetical protein H257_18134 [Aphanomyces astaci] >gi|574099474|gb|ETV65086.1| hypothetical protein H257_18134 [Aphanomyces astaci]) HSP 1 Score: 80.1073 bits (196), Expect = 1.178e-13 Identity = 69/257 (26.85%), Postives = 106/257 (41.25%), Query Frame = 0
Query: 47 VSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRWPKLYPVPWLEHVREEHSRCVLHVTEVQTGRVLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPPLEDGAEATQT 303
+++++ FRL +GM E+L RG+A V + K + L TC+HVA PWR+P YP WL+HV E + L + E+ +G + ++ + H S D+ L L+ + + + P L F+V + DG + D T V + G L+ T Q FA VL G+CG + VGLVEGIVP +E+ + A +T
Sbjct: 7 LALTTLFRLPHEGMEAFEVLSRGSAMLVHRTRAKRNPSLLHVLTCAHVACPWRYPAYYPHEWLQHVDEGFVKHTLALREIGSGATMWEVDLEPHTAVHPSRDLALLELKSS------VVRDDKSVDPFDLDT------------AFSVAESEPLVFDGHVQ--PDETTTCVQPESVAGAYFWLNPTTKQ---------------------AFASSATVLTQGMCGGAAFTTHGR-KVVGLVEGIVPVVENASPAYKT 221
BLAST of EWM26118.1 vs. NCBI_GenBank
Match: gi|219112145|ref|XP_002177824.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410709|gb|EEC50638.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 80.4925 bits (197), Expect = 3.751e-13 Identity = 73/300 (24.33%), Postives = 117/300 (39.00%), Query Frame = 0
Query: 46 SVSISSWFRLADQGMLQHEMLCRGTAF--GVQLPQRK-----------------------SKHAP------------------------LIFFTCSHVAAPWRWPKLYPVPWLEHVREEHSRCVLHVTEVQT-GRVLERFLMDSNVVHH-DSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDG--EDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVP 292
S+++S +F+ D GM +E+L R +AF G+ P+RK K P + SHV +P+ W YP WL VR+EH L V + + L + +DS HH + D+ + +++E ++ + G+ + L E++ G + G+ V ADD G + +EDL + +G +S + + R FA L +G+CGAP+LD +G G VEGIVP
Sbjct: 24 SLALSVYFKQPDLGMKDYEILSRASAFLLGIDPPERKPEGPYGHLEILEERRKTREFQHRKKFTPAGGEGREIMDLSWLEFVPREVRPQVHIVASSHVLSPFLWKDYYPQDWLTQVRQEHCTYALEVFDSENPNESLAKIGLDSTPFHHPEGRDISVIHFKEEESSLKTLKNLGVKIQYLRSPEKMYEKGETMYFDGYVVSE-PNTADDQQYGSKPVNHGNTNDKIEDLRVFYPHK--------------EIGKLSFHTN--DRFFATTPEPLPEGLCGAPVLD--SDGELCGTVEGIVP 304
BLAST of EWM26118.1 vs. NCBI_GenBank
Match: gi|953503482|emb|CEG35492.1| (Trypsin-like cysteine/serine peptidase domain [Plasmopara halstedii]) HSP 1 Score: 78.9518 bits (193), Expect = 5.090e-13 Identity = 74/288 (25.69%), Postives = 125/288 (43.40%), Query Frame = 0
Query: 47 VSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRWPKLYPV--PWLEHVREEHSRCVLHVTEVQTGRVLERFLMDSNVVH----HDSLDVCALRLQDQEKV-MQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHYKDRQA--RGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPPLEDGAEATQTGSGLAGREVELRKAIAGNAGFI 325
+SI++ F L +GM + L G+A + R S ++ L T HVA PW +PK + WL+ V E+H R L + + L+D + H H S D+ L L+D + + R A+ L L PL+L + G+ ++ G + ++ D + D+ Q P+ + H+ R + FA +L +G+CG ++ G+CVG++EGIVP + E + A ++R+A+AG+ FI
Sbjct: 26 LSITTRFCLPHEGMTTLDYLSSGSAVVL----RNSMNSSLSIITSHHVACPWMFPKYFASMWDWLQFVNEDHVRHSLQLLIEDNANSGPKVLLDLPLAHQVQTHGSRDLALLSLKDSAAIEIWRQAEQELKLQPLMLQQMPCERGDPLIFSG----------------------HKQLFND-------QKDIGGYQIPKTV------RGHFVGRSTSRQEFAWSQELLEEGMCGGAVIS-SVSGQCVGIIEGIVPTIRKEDEDSLLHDEKALGSWKMRQALAGHVAFI 273
BLAST of EWM26118.1 vs. NCBI_GenBank
Match: gi|1173954145|gb|OQS01633.1| (hypothetical protein ACHHYP_00524 [Achlya hypogyna]) HSP 1 Score: 70.0922 bits (170), Expect = 3.300e-10 Identity = 66/262 (25.19%), Postives = 108/262 (41.22%), Query Frame = 0
Query: 44 RISVSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAP--LIFFTCSHVAAPWRWPKLYPVPWLEHVREEHSRCVLHVTEVQTGRVLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPPLEDGAEATQT 303
R +++++ FRL +GM +E+L RG+A L QR + P L TC+HVA PW +P YP WL+HV E + + L + + ++ ++S+V H + D+ AL L +++ VP +S A++ + G + D VV+ G+ + R++ F D VL G+CG + VGL+EGIVP + A +T
Sbjct: 3 RRVLALTTQFRLPHEGMASYEVLSRGSAI---LGQRLANLDPSRLHVVTCAHVACPWLFPAYYPNDWLQHVDEAYVKHTLSLHDAESCTKTWEIDLESHVSLHPTRDLAALELN-------------------LITANVPDLAGYDLSVLVALDESTQLEYHGHIEPTPD-----VVQPQTVAGAY---FWANPSTRQV-----------------FGKSDTVLAQGMCGGA---VTAHDTVVGLIEGIVPEKANATPAYKT 214
BLAST of EWM26118.1 vs. NCBI_GenBank
Match: gi|1173941394|gb|OQR90569.1| (hypothetical protein THRCLA_09278 [Thraustotheca clavata]) HSP 1 Score: 68.1662 bits (165), Expect = 1.520e-9 Identity = 67/264 (25.38%), Postives = 109/264 (41.29%), Query Frame = 0
Query: 42 LHRISVSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIF--FTCSHVAAPWRWPKLYPVPWLEHVREEHSRCVLHVTEVQTGRVLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPPLEDGAEATQT 303
+ R +++++ FRL +GM+++E+L RG+A + +R P F TC+HVA PW +P YP WL+HV E + + + ++ + + F +++ V+ H S D L L V ++ G L LV E G +E G ++ V++ L GS T + F + VL G+CG + VGL+EGIVP E + A +T
Sbjct: 1 MMRRVLALTTHFRLPHEGMVEYEVLSRGSAI---VGKRMVDKDPTRFHVLTCAHVACPWLFPSYYPNDWLQHVDERFIKYTVALHDLVSNDKVWEFQLENRVMLHSSRDFAVLEL--DANVNKQPDLDGCDLSALVAMET-----------GLPLEY-----------HGHIEPFSGVIQPLTVPGSFFWANPTTHQ--------------------VFGKSEPVLEQGMCGGA---VTSNDCVVGLIEGIVPEKEGASSAYKT 214 The following BLAST results are available for this feature:
BLAST of EWM26118.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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