EWM26118.1, cds4547 (CDS) Nannochloropsis gaditana

Overview
NameEWM26118.1
Unique Namecds4547
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:913180..914205 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26118.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100014g37.9295.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:913180..914205 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM26118.1 vs. NCBI_GenBank
Match: gi|585108112|gb|EWM26118.1| (hypothetical protein Naga_100014g37 [Nannochloropsis gaditana])

HSP 1 Score: 697.197 bits (1798), Expect = 0.000e+0
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0
Query:    1 MTLGTEGMKITSLRLSPALGHKMGRHRSFSAGVSSTSNTLPLHRISVSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRWPKLYPVPWLEHVREEHSRCVLHVTEVQTGRVLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPPLEDGAEATQTGSGLAGREVELRKAIAGNAGFIYGQQLIDLLEKVSDNK 341
            MTLGTEGMKITSLRLSPALGHKMGRHRSFSAGVSSTSNTLPLHRISVSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRWPKLYPVPWLEHVREEHSRCVLHVTEVQTGRVLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPPLEDGAEATQTGSGLAGREVELRKAIAGNAGFIYGQQLIDLLEKVSDNK
Sbjct:    1 MTLGTEGMKITSLRLSPALGHKMGRHRSFSAGVSSTSNTLPLHRISVSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRWPKLYPVPWLEHVREEHSRCVLHVTEVQTGRVLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPPLEDGAEATQTGSGLAGREVELRKAIAGNAGFIYGQQLIDLLEKVSDNK 341          
BLAST of EWM26118.1 vs. NCBI_GenBank
Match: gi|553196453|ref|XP_005856346.1| (hypothetical protein NGA_2002400, partial [Nannochloropsis gaditana CCMP526] >gi|422292700|gb|EKU20002.1| hypothetical protein NGA_2002400, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 91.6633 bits (226), Expect = 5.835e-18
Identity = 72/257 (28.02%), Postives = 112/257 (43.58%), Query Frame = 0
Query:   43 HRISVSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRWPKLYPVPWLEHVREEH--SRCVLHVTEV---QTGRVLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLD-LRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPP 293
            +R  +S+SS+F+L +QGM  +E+L +GT F +  P   S    +I  +CSHV AP+RW + +  PWLE V++EH   R  +   E    + GR      ++    HH  LD+C + L+D                              +V     V   +R          +DGE     E+L   G    D +  D++   + +    +  + D Q R +A     L  G+ G P+LD    GR  GL +GI+PP
Sbjct:   10 YRTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTK--VILLSCSHVLAPYRWQQYFKKPWLEFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLED-----------------------------GIVETCALVPYDER----------DDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLD--GSGRFCGLFQGILPP 223          
BLAST of EWM26118.1 vs. NCBI_GenBank
Match: gi|585108074|gb|EWM26080.1| (hypothetical protein Naga_100014g38 [Nannochloropsis gaditana])

HSP 1 Score: 92.0485 bits (227), Expect = 1.690e-17
Identity = 76/284 (26.76%), Postives = 124/284 (43.66%), Query Frame = 0
Query:   16 SPALGHKMGRHRSFSAGVSSTSNTLPLHRISVSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRWPKLYPVPWLEHVREEH--SRCVLHVTEV---QTGRVLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLD-LRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPP 293
            +P+ G + G     S G+ + ++    +R  +S+SS+F+L +QGM  +E+L +GT F +  P   S    +I  +CSHV AP+RW + +  PWL+ V++EH   R  +   E    + GR      ++    HH  LD+C + L+                             N +V     V   +R          +DGE     E+L   G    D +  D++   + +    +  + D Q R +A     L  G+ G P+LD    GR  GL +GI+PP
Sbjct:   33 TPSHGVRQGYISMTSPGIRTKASH---YRTILSVSSYFKLPEQGMKDYELLSQGTGFCLSGPPALSTK--VILLSCSHVLAPYRWQQYFKKPWLKFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLE-----------------------------NGIVETCALVPYDER----------DDGEVMIEKENLTFLGFPSTDTINIDKKACLMHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLD--GSGRFCGLFQGILPP 270          
BLAST of EWM26118.1 vs. NCBI_GenBank
Match: gi|695417785|ref|XP_009527213.1| (hypothetical protein PHYSODRAFT_346301 [Phytophthora sojae] >gi|695468036|ref|XP_009539771.1| hypothetical protein PHYSODRAFT_566735 [Phytophthora sojae] >gi|348664958|gb|EGZ04795.1| hypothetical protein PHYSODRAFT_566735 [Phytophthora sojae] >gi|348678338|gb|EGZ18155.1| hypothetical protein PHYSODRAFT_346301 [Phytophthora sojae])

HSP 1 Score: 85.8853 bits (211), Expect = 1.171e-15
Identity = 80/289 (27.68%), Postives = 124/289 (42.91%), Query Frame = 0
Query:   44 RISVSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRWPKLYPVP--WLEHVREEHSRCVLHVTEVQTGR--VLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDG-SLSDGEDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHYKDRQARG--FAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPPLEDGAEATQTGSGLAGREVELRKAIAGNAGFI 325
            R  +S+++ F L  QGM   + L  G+A  ++  Q  S  + L   TC HVA PW +P+ +     WL+ V E+  R  L +  V   +  VL    +   V  H+S D+  L L D +   Q  A+  L LH L L +     G+A++  G       R+ ++G  L  G DG                                    H+  R + G  FA    +L +G+CG  ++D   +  CVG+VEGIVP +  G +        A    ++R+A+AG+  FI
Sbjct:    7 RAVLSLTTRFCLPHQGMATLDYLSSGSAVVLRGSQDASDSSSLAVATCQHVACPWLFPQYFTATWDWLQFVSEDFVRHSLQLLAVDAPKPEVLLELPLARKVQTHESRDLALLTLADADAWKQ--AEESLGLHALTLQQTPAQRGDALLFSG------HRQLEEGLQLPKGVDG------------------------------------HFVGRSSSGQEFAWSRELLEEGMCGGAVIDAAGD-ECVGIVEGIVPSIGQGDDEPSLHDREAHAAWQMRQALAGHVAFI 250          
BLAST of EWM26118.1 vs. NCBI_GenBank
Match: gi|673014604|ref|XP_008861263.1| (hypothetical protein H310_00307 [Aphanomyces invadans] >gi|574482861|gb|ETW09852.1| hypothetical protein H310_00307 [Aphanomyces invadans])

HSP 1 Score: 81.6481 bits (200), Expect = 3.100e-14
Identity = 66/257 (25.68%), Postives = 110/257 (42.80%), Query Frame = 0
Query:   47 VSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRWPKLYPVPWLEHVREEHSRCVLHVTEVQTGRVLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPPLEDGAEATQT 303
            +++++ FRL  +GM   E+L RG+A  V     K     +   TC+HVA PWR+   YP  WLEHV E   +  L + EV +G       +  + + H + D+  L LQ                             +++++   +V+       D + +  E+       E LE  G ++L+      P  +    G          + FA  ++VL  G+CG      +Q  + VGL+EGIVP +E+ + A +T
Sbjct:    8 LALTTLFRLPHEGMQAFEVLSRGSAMLVHRTGAKRNPTHVHVLTCAHVACPWRYSSYYPHDWLEHVDENFVKHTLALREVGSGATKWEVDLLPHTLVHPTRDLALLELQ-----------------------------SSILTNDDSVDPFDL---DTAFAVAEN-------EPLEFHGHIQLNETAPILPESVA---GAYFWLNPTTKQAFASSEKVLAQGMCGGAAFT-KQGRKVVGLIEGIVPVVENASPAYKT 221          
BLAST of EWM26118.1 vs. NCBI_GenBank
Match: gi|698824833|ref|XP_009845445.1| (hypothetical protein H257_18134 [Aphanomyces astaci] >gi|574099474|gb|ETV65086.1| hypothetical protein H257_18134 [Aphanomyces astaci])

HSP 1 Score: 80.1073 bits (196), Expect = 1.178e-13
Identity = 69/257 (26.85%), Postives = 106/257 (41.25%), Query Frame = 0
Query:   47 VSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRWPKLYPVPWLEHVREEHSRCVLHVTEVQTGRVLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPPLEDGAEATQT 303
            +++++ FRL  +GM   E+L RG+A  V   + K   + L   TC+HVA PWR+P  YP  WL+HV E   +  L + E+ +G  +    ++ +   H S D+  L L+        + +    + P  L               F+V   +    DG +    D   T V  +   G    L+  T Q                      FA    VL  G+CG          + VGLVEGIVP +E+ + A +T
Sbjct:    7 LALTTLFRLPHEGMEAFEVLSRGSAMLVHRTRAKRNPSLLHVLTCAHVACPWRYPAYYPHEWLQHVDEGFVKHTLALREIGSGATMWEVDLEPHTAVHPSRDLALLELKSS------VVRDDKSVDPFDLDT------------AFSVAESEPLVFDGHVQ--PDETTTCVQPESVAGAYFWLNPTTKQ---------------------AFASSATVLTQGMCGGAAFTTHGR-KVVGLVEGIVPVVENASPAYKT 221          
BLAST of EWM26118.1 vs. NCBI_GenBank
Match: gi|219112145|ref|XP_002177824.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410709|gb|EEC50638.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 80.4925 bits (197), Expect = 3.751e-13
Identity = 73/300 (24.33%), Postives = 117/300 (39.00%), Query Frame = 0
Query:   46 SVSISSWFRLADQGMLQHEMLCRGTAF--GVQLPQRK-----------------------SKHAP------------------------LIFFTCSHVAAPWRWPKLYPVPWLEHVREEHSRCVLHVTEVQT-GRVLERFLMDSNVVHH-DSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDG--EDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVP 292
            S+++S +F+  D GM  +E+L R +AF  G+  P+RK                        K  P                        +     SHV +P+ W   YP  WL  VR+EH    L V + +     L +  +DS   HH +  D+  +  +++E  ++ +   G+ +  L   E++   G  +   G+ V      ADD          G   + +EDL      +               +G +S + +   R FA     L +G+CGAP+LD   +G   G VEGIVP
Sbjct:   24 SLALSVYFKQPDLGMKDYEILSRASAFLLGIDPPERKPEGPYGHLEILEERRKTREFQHRKKFTPAGGEGREIMDLSWLEFVPREVRPQVHIVASSHVLSPFLWKDYYPQDWLTQVRQEHCTYALEVFDSENPNESLAKIGLDSTPFHHPEGRDISVIHFKEEESSLKTLKNLGVKIQYLRSPEKMYEKGETMYFDGYVVSE-PNTADDQQYGSKPVNHGNTNDKIEDLRVFYPHK--------------EIGKLSFHTN--DRFFATTPEPLPEGLCGAPVLD--SDGELCGTVEGIVP 304          
BLAST of EWM26118.1 vs. NCBI_GenBank
Match: gi|953503482|emb|CEG35492.1| (Trypsin-like cysteine/serine peptidase domain [Plasmopara halstedii])

HSP 1 Score: 78.9518 bits (193), Expect = 5.090e-13
Identity = 74/288 (25.69%), Postives = 125/288 (43.40%), Query Frame = 0
Query:   47 VSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRWPKLYPV--PWLEHVREEHSRCVLHVTEVQTGRVLERFLMDSNVVH----HDSLDVCALRLQDQEKV-MQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHYKDRQA--RGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPPLEDGAEATQTGSGLAGREVELRKAIAGNAGFI 325
            +SI++ F L  +GM   + L  G+A  +    R S ++ L   T  HVA PW +PK +     WL+ V E+H R  L +          + L+D  + H    H S D+  L L+D   + + R A+  L L PL+L +     G+ ++  G                      + ++  D       + D+   Q P+ +        H+  R    + FA    +L +G+CG  ++     G+CVG++EGIVP +    E +      A    ++R+A+AG+  FI
Sbjct:   26 LSITTRFCLPHEGMTTLDYLSSGSAVVL----RNSMNSSLSIITSHHVACPWMFPKYFASMWDWLQFVNEDHVRHSLQLLIEDNANSGPKVLLDLPLAHQVQTHGSRDLALLSLKDSAAIEIWRQAEQELKLQPLMLQQMPCERGDPLIFSG----------------------HKQLFND-------QKDIGGYQIPKTV------RGHFVGRSTSRQEFAWSQELLEEGMCGGAVIS-SVSGQCVGIIEGIVPTIRKEDEDSLLHDEKALGSWKMRQALAGHVAFI 273          
BLAST of EWM26118.1 vs. NCBI_GenBank
Match: gi|1173954145|gb|OQS01633.1| (hypothetical protein ACHHYP_00524 [Achlya hypogyna])

HSP 1 Score: 70.0922 bits (170), Expect = 3.300e-10
Identity = 66/262 (25.19%), Postives = 108/262 (41.22%), Query Frame = 0
Query:   44 RISVSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAP--LIFFTCSHVAAPWRWPKLYPVPWLEHVREEHSRCVLHVTEVQTGRVLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPPLEDGAEATQT 303
            R  +++++ FRL  +GM  +E+L RG+A    L QR +   P  L   TC+HVA PW +P  YP  WL+HV E + +  L + + ++        ++S+V  H + D+ AL L                    +++  VP      +S   A++   +    G +    D     VV+     G+       +   R++                 F   D VL  G+CG     +      VGL+EGIVP   +   A +T
Sbjct:    3 RRVLALTTQFRLPHEGMASYEVLSRGSAI---LGQRLANLDPSRLHVVTCAHVACPWLFPAYYPNDWLQHVDEAYVKHTLSLHDAESCTKTWEIDLESHVSLHPTRDLAALELN-------------------LITANVPDLAGYDLSVLVALDESTQLEYHGHIEPTPD-----VVQPQTVAGAY---FWANPSTRQV-----------------FGKSDTVLAQGMCGGA---VTAHDTVVGLIEGIVPEKANATPAYKT 214          
BLAST of EWM26118.1 vs. NCBI_GenBank
Match: gi|1173941394|gb|OQR90569.1| (hypothetical protein THRCLA_09278 [Thraustotheca clavata])

HSP 1 Score: 68.1662 bits (165), Expect = 1.520e-9
Identity = 67/264 (25.38%), Postives = 109/264 (41.29%), Query Frame = 0
Query:   42 LHRISVSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIF--FTCSHVAAPWRWPKLYPVPWLEHVREEHSRCVLHVTEVQTGRVLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPPLEDGAEATQT 303
            + R  +++++ FRL  +GM+++E+L RG+A    + +R     P  F   TC+HVA PW +P  YP  WL+HV E   +  + + ++ +   +  F +++ V+ H S D   L L     V ++    G  L  LV  E            G  +E             G    ++ V++ L   GS      T  +                     F   + VL  G+CG     +      VGL+EGIVP  E  + A +T
Sbjct:    1 MMRRVLALTTHFRLPHEGMVEYEVLSRGSAI---VGKRMVDKDPTRFHVLTCAHVACPWLFPSYYPNDWLQHVDERFIKYTVALHDLVSNDKVWEFQLENRVMLHSSRDFAVLEL--DANVNKQPDLDGCDLSALVAMET-----------GLPLEY-----------HGHIEPFSGVIQPLTVPGSFFWANPTTHQ--------------------VFGKSEPVLEQGMCGGA---VTSNDCVVGLIEGIVPEKEGASSAYKT 214          
The following BLAST results are available for this feature:
BLAST of EWM26118.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108112|gb|EWM26118.1|0.000e+0100.00hypothetical protein Naga_100014g37 [Nannochlorops... [more]
gi|553196453|ref|XP_005856346.1|5.835e-1828.02hypothetical protein NGA_2002400, partial [Nannoch... [more]
gi|585108074|gb|EWM26080.1|1.690e-1726.76hypothetical protein Naga_100014g38 [Nannochlorops... [more]
gi|695417785|ref|XP_009527213.1|1.171e-1527.68hypothetical protein PHYSODRAFT_346301 [Phytophtho... [more]
gi|673014604|ref|XP_008861263.1|3.100e-1425.68hypothetical protein H310_00307 [Aphanomyces invad... [more]
gi|698824833|ref|XP_009845445.1|1.178e-1326.85hypothetical protein H257_18134 [Aphanomyces astac... [more]
gi|219112145|ref|XP_002177824.1|3.751e-1324.33predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|953503482|emb|CEG35492.1|5.090e-1325.69Trypsin-like cysteine/serine peptidase domain [Pla... [more]
gi|1173954145|gb|OQS01633.1|3.300e-1025.19hypothetical protein ACHHYP_00524 [Achlya hypogyna... [more]
gi|1173941394|gb|OQR90569.1|1.520e-925.38hypothetical protein THRCLA_09278 [Thraustotheca c... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4559rna4559Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications