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Properties
| Property Name | Value |
|---|
| Product | elongator complex protein 4 |
| Orig transcript id | gnl|cribi|Naga_100014g26.9267.mrna |
| Orig protein id | gnl|cribi|Naga_100014g26.9267 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:889139..890766 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4548 ID=rna4548|Name=rna4548|organism=Nannochloropsis gaditana|type=mRNA|length=1278bp
ATGCTTTTTTTAAAAATAAGAAGAAGGCGGCTGGAATTAAATTTGACCTC
AAGTGTTGGGTTCATAATTCCAAGAGTCTGTATTCGCGAGATACACGATG
TTGCGGCTGCAGGCTTCCGAAAGCAGGCGGAGGGATACGAGAGGACCCGG
CCATCTTATCCTGCAGCGGCCGTGAACTACGTAGCAAAACTTATCGGATT
AAGCAAGAGAGATCTGGGGAAAAGTACAAATGTACTGGACTTAGCAGCGG
GCGGTGGCAAGTTTACCTGTTTAATAAGCAAGCGCAGAGGATTTCACGTT
GTCGCTGTGGAACCGGTGTTGGCGATGCGAGAGGTCTTTCAGCAAAAGCT
TCCCGAGATCCCATGCCTGCCAGGTACGGCAGACAAGATCCCTTGCCGTA
ATCAGTCCTTCGACGCCGTGACAATCGCCCAAGCGTTCCATTGGATGAGC
ACATTAGACGCCCTTCGAGATATCCACCGCGTGCTTCGCCCTGGAGGCCT
CTTGGCCTTGCTCTGGAACATGGAGAGCCGATCCGTCCCCTGGGTGGCGT
CCTTGCGCGATATCTATGAGAAGTACGACACCAACATCCCCCAGTACCGT
CATGGGGACTGGAAGGAGGTCTTTCTCCTTCCAGAGGCGCAGCGGCTTTT
CCCAGGACCCCTGACAACTCGATTTTTCCAACAAGACATGCTCGTCACGA
AGGAGAGGGCTTGGGAGCGGGTATTGAGCAAGAGTTACATCGCGTCGCTG
ACAGAAATGGAGCAAGCAGTCGTTCGCTCGCAGGTGGAAGGGATTTTGCA
TGAGAACCGATCGGCTTTTAGTATTCCAACGAGAAATCCGGTCACAAGTG
AGAAGGAATTTGCCGCACACCAACTCATCGACACCGAGGTGACCTATATT
CGAGAAGCAGCCCTCAACAGTCTGCGACGCTTGCCCAACGAACTCGTGCG
GAAGGAGAAGCAGCCCTCAACAGTCTGTGACGCTTGCCCGACGAACTCGT
GCGGAAGGAGAAGCAGCCCTCAACAGTCAGCGACGCTTGCCCGACGAACT
CGTGCGGAAGGAGAAGCAGCCCTTAACAGTCTGCGACGCTTGCCGGAGGA
GGAACCGACGGAGCTAGGAGACCGATACAACTCGGCTTCAGCGGATGCCC
GGCAAAGGCCGGAGGTCCAGCTACAGGATGAGGAGCTCTTTGTCAACCTC
CATAGGCTGGTCAATGCGGTGGCTCCTCCTGTCAACGTCCTGATTGAGAC
GTTGAGCATGCAAGAAGGCCAAACCTGA back to topprotein sequence of rna4548 >rna4548-protein ID=rna4548-protein|Name=rna4548|organism=Nannochloropsis gaditana|type=polypeptide|length=445bp
MIKTSRARLLNTRGPYRMASLSSFRRIDRPVTTSVPKQYDISSSIPTVPP
RAPGTKPWINGNTLISSGNRDLDSVLGGGICLGTVTLVEEDRFSDHALVL
SKYFLAQGVSGMHQCLVIGAEGSKAALQKTFVVQLPFDLTYKKNQQEQQE
REDRPCTGGSDPSSALPTRPLSTFSRELGDSLPSVGGPRHDPLSIAWQYR
KYINTPTPPPRGSASTAPASSSFCNSYDLSRDIQPEVLAAAAPPVVVDVS
EEEEGQQEPSSACSRVYQSVASAIKSLPENTVLRVVIKSFLTKTGAWASA
HEGEPLLLLHSLRRLIRHHPVAIFVTLSAHHVPQRQRRLLARVADTVLEL
QSFAGHRHRTAPEFEAFAGFLHIKALQHLNALAPIRGPSNKLGVKRDRRK
LHIEPLHLPPEGVRTLTEDVEMQKRGRRRKEERGGDRGERGKPAV back to topmRNA from alignment at CM002463.1:889139..890766+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4548 ID=rna4548|Name=rna4548|organism=Nannochloropsis gaditana|type=mRNA|length=1628bp|location=Sequence derived from alignment at CM002463.1:889139..890766+ (Nannochloropsis gaditana)
TGTCTTTTTCCCTGAGATGATCAAAACCTCACGTGCACGACTTCTCAACA
CCAGAGGTTTGTGCCCGGAGGTTTCATGAACATTTGGTTCTATCATGGAA
GAGTTTGATTGCGGGATTGATTTGATCGAAGTGACgtctcaacctcccca
cctccgtCAACCActacctcctcaccctccacaGGTCCATATAGGATGGC
GTCTTTGTCCTCTTTTAGGAGGATAGATCGACCAGTAACGACATCAGTAC
CAAAACAATATGATATCTCTTCATCAATTCCTACAGTTCCACCTAGAGCA
CCGGGCACGAAGCCTTGGATAAATGGCAACACCCTAATTTCGTCGGGGAA
CAGGGACCTGGACAGCgtcttggggggggggatatGTCTGGGCACAGTGA
CGCTTGTTGAAGAGGATCGCTTTTCGGACCATGCCTTGGTTTTATCGAAA
TATTTTCTTGCTCAGGGCGTAAGTGGAATGCATCAATGCCTGGTGATAGG
TGCTGAGGGCAGTAAGGCGGCGCTTCAAAAGACTTTCGTTGTCCAGCTTC
CATTTGATCTAACGTACAAAAAAAATCAGCAAGAGCAACAAGAGCGAGAA
GACAGACCATGTacaggaggaagcgatcCATCGTCCGCTCTACCGACGAG
GCCCCTGTCCACCTTCTCCAGGGAATTGGGCGACTCGTTGCCCTCGGTGG
GGGGGCCGCGCCATGACCCCCTGAGCATCGCGTGGCAGTACCGGAAGTAC
ATCAACACACCGACACCGCCCCCAAGAGGATCGGCTTCTACCgcacccgc
ttcctcctcattttgCAACAGCTACGACCTGAGCCGAGACATTCAGCCGG
AAGTtctggcagcggcagcgccgccggtggtggtggatgtgagcgaagag
gaagaagggcagcaagagccctcctccgcatgcTCTCGCGTGTATCAGTC
GGTGGCTAGTGCCATCAAGTCCCTTCCAGAGAACACTGTTCTTCGCGTGG
TCATCAAGTCCTTTTTGACCAAGACGGGCGCCTGGGCGTCGGCCCACGAG
GGagagcccctcctcctcctccattccctgcGCCGGCTCATCCGCCATCA
CCCTGTGGCCATTTTTGTGACCCTCTCCGCCCACCATGTCCCACAGCGCC
AGCGCCGACTCCTCGCGCGCGTGGCAGACACGGTCCTAGAGCTACAGTCC
TTCGCTGGGCACCGGCATCGCACGGCCCCCGAGTTCGAGGCCTTCGCCGG
CTTCCTCCATATCAAGGCACTGCAGCATTTGAATGCGTTGGCCCCTATCA
GGGGGCCGTCCAACAAGCTCGGCGTGAAGCGGGACCGGCGAAAGCTGCAC
ATTGAgccgctccacctcccccccgagggAGTGCGGACCTtgacggagga
cgtggagatgcagaagcgggggaggaggaggaaggaggagaggggggggg
accggggggagaggggaaaaccGGCGGTCTAGTCCCGGGGATGATGTGTG
CCACgagcgggcggggcgggcatgGCGCGTCGCTCGACTTCTAGAGAAAG
GATCGACGCATGGGcacagaggagaggggggggaggctctTACGCTGAGG
GCTTGAAAAGAAGGCAGAAGGTGACTTG back to topCoding sequence (CDS) from alignment at CM002463.1:889139..890766+ >rna4548 ID=rna4548|Name=rna4548|organism=Nannochloropsis gaditana|type=CDS|length=2676bp|location=Sequence derived from alignment at CM002463.1:889139..890766+ (Nannochloropsis gaditana)
ATGATCAAAACCTCACGTGCACGACTTCTCAACACCAGAGGTCCATATAG
GATGGCGTCTTTGTCCTCTTTTAGGAGGATAGATCGACCAGTAACGACAT
CAGTACCAAAACAATATGATATCTCTTCATCAATTCCTACAGTTCCACCT
AGAGCACCGGGCACGAAGCCTTGGATAAATGGCAACACCCTAATTTCGTC
GGGGAACAGGGACCTGGACAGCgtcttggggggggggatatGTCTGGGCA
CAGTGACGCTTGTTGAAGAGGATCGCTTTTCGGACCATGCCTTGGTTTTA
TCGAAATATTTTCTTGCTCAGGGCGTAAGTGGAATGCATCAATGCCTGGT
GATAGGTGCTGAGGGCAGTAAGGCGGCGCTTCAAAAGACTTTCGTTGTCC
AGCTTCCATTTGATCTAACGTACAAAAAAAATCAGCAAGAGCAACAAGAG
CGAGAAGACAGACCATGTacaggaggaagcgatcCATCGTCCGCTCTACC
GACGAGGCCCCTGTCCACCTTCTCCAGGGAATTGGGCGACTCGTTGCCCT
CGGTGGGGGGGCCGCGCCATGACCCCCTGAGCATCGCGTGGCAGTACCGG
AAGTACATCAACACACCGACACCGCCCCCAAGAGGATCGGCTTCTACCgc
acccgcttcctcctcattttgCAACAGCTACGACCTGAGCCGAGACATTC
AGCCGGAAGTtctggcagcggcagcgccgccggtggtggtggatgtgagc
gaagaggaagaagggcagcaagagccctcctccgcatgcTCTCGCGTGTA
TCAGTCGGTGGCTAGTGCCATCAAGTCCCTTCCAGAGAACACTGTTCTTC
GCGTGGTCATCAAGTCCTTTTTGACCAAGACGGGCGCCTGGGCGTCGGCC
CACGAGGGagagcccctcctcctcctccattccctgcGCCGGCTCATCCG
CCATCACCCTGTGGCCATTTTTGTGACCCTCTCCGCCCACCATGTCCCAC
AGCGCCAGCGCCGACTCCTCGCGCGCGTGGCAGACACGGTCCTAGAGCTA
CAGTCCTTCGCTGGGCACCGGCATCGCACGGCCCCCGAGTTCGAGGCCTT
CGCCGGCTTCCTCCATATCAAGGCACTGCAGCATTTGAATGCGTTGGCCC
CTATCAGGGGGCCGTCCAACAAGCTCGGCGTGAAGCGGGACCGGCGAAAG
CTGCACATTGAgccgctccacctcccccccgagggAGTGCGGACCTtgac
ggaggacgtggagatgcagaagcgggggaggaggaggaaggaggagaggg
ggggggaccggggggagaggggaaaaccGGCGGTCTAGATGATCAAAACC
TCACGTGCACGACTTCTCAACACCAGAGGTCCATATAGGATGGCGTCTTT
GTCCTCTTTTAGGAGGATAGATCGACCAGTAACGACATCAGTACCAAAAC
AATATGATATCTCTTCATCAATTCCTACAGTTCCACCTAGAGCACCGGGC
ACGAAGCCTTGGATAAATGGCAACACCCTAATTTCGTCGGGGAACAGGGA
CCTGGACAGCgtcttggggggggggatatGTCTGGGCACAGTGACGCTTG
TTGAAGAGGATCGCTTTTCGGACCATGCCTTGGTTTTATCGAAATATTTT
CTTGCTCAGGGCGTAAGTGGAATGCATCAATGCCTGGTGATAGGTGCTGA
GGGCAGTAAGGCGGCGCTTCAAAAGACTTTCGTTGTCCAGCTTCCATTTG
ATCTAACGTACAAAAAAAATCAGCAAGAGCAACAAGAGCGAGAAGACAGA
CCATGTacaggaggaagcgatcCATCGTCCGCTCTACCGACGAGGCCCCT
GTCCACCTTCTCCAGGGAATTGGGCGACTCGTTGCCCTCGGTGGGGGGGC
CGCGCCATGACCCCCTGAGCATCGCGTGGCAGTACCGGAAGTACATCAAC
ACACCGACACCGCCCCCAAGAGGATCGGCTTCTACCgcacccgcttcctc
ctcattttgCAACAGCTACGACCTGAGCCGAGACATTCAGCCGGAAGTtc
tggcagcggcagcgccgccggtggtggtggatgtgagcgaagaggaagaa
gggcagcaagagccctcctccgcatgcTCTCGCGTGTATCAGTCGGTGGC
TAGTGCCATCAAGTCCCTTCCAGAGAACACTGTTCTTCGCGTGGTCATCA
AGTCCTTTTTGACCAAGACGGGCGCCTGGGCGTCGGCCCACGAGGGagag
cccctcctcctcctccattccctgcGCCGGCTCATCCGCCATCACCCTGT
GGCCATTTTTGTGACCCTCTCCGCCCACCATGTCCCACAGCGCCAGCGCC
GACTCCTCGCGCGCGTGGCAGACACGGTCCTAGAGCTACAGTCCTTCGCT
GGGCACCGGCATCGCACGGCCCCCGAGTTCGAGGCCTTCGCCGGCTTCCT
CCATATCAAGGCACTGCAGCATTTGAATGCGTTGGCCCCTATCAGGGGGC
CGTCCAACAAGCTCGGCGTGAAGCGGGACCGGCGAAAGCTGCACATTGAg
ccgctccacctcccccccgagggAGTGCGGACCTtgacggaggacgtgga
gatgcagaagcgggggaggaggaggaaggaggagagggggggggaccggg
gggagaggggaaaaccGGCGGTCTAG back to top
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