|
|
Properties
| Property Name | Value |
|---|
| Product | phosphoribulokinase uridine kinase family protein |
| Orig transcript id | gnl|cribi|Naga_100014g22.9312.mrna |
| Orig protein id | gnl|cribi|Naga_100014g22.9312 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:882426..884011 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4545 ID=rna4545|Name=rna4545|organism=Nannochloropsis gaditana|type=mRNA|length=3303bp
ATGGCTGGGCAGCCTCTTCGTATTTTTGACAAGTTCTATCTGATAACTGT
CCAGCAAGGACGCCAAGGCGCCATACCTTATGAATACCCTCCTGTCTCTG
CAGCGGATTCATGCGCGAGAAAGTTGCCACATCACAACGATCTTATCAAT
ATTTGCTTTCCCGATTTGGAAGAAATCCGGAAAACGCGGTCTCTAAACTT
CAAGTGCCCGAAACTCCCACGTCAAGCCTCAACTTTGGGCGCCCTGGGCG
CTCAAGTCAGCAATATCGGGGAGAGGGTGGGAGTGGTCTCAGTAGGTCCT
GCGGCCCCACCCACGCTGGCAGGGGGGAGGAGTAGCGCTTTTAGCGTCAG
CAATGCGAGTGCGGCCTCTTCCGCTTGGGCTGGCGCGAGCATCGTGACAG
AAAGTAGCAGCGGAGACAATTTCCGCGCTGAACTTTACTGCTTCTCAATC
GGCGACCCGGAAGATGAGCGCACTCATGGATTCGTCTATCGCTGTCTCCC
CTCGGGGTTTGGCATGCGATACGATGTGGGCAAGCGCTACCCCGAGTGTC
TGTGCTTCTTGACGCGCCACGCGAATGCGCGTCCCATCGTCCAGCACGTG
TTGCAGCATGTGCACGCCCTGCGTCTCCTGTTCACGCCTGTCGATCGCAT
CGAATCAGTGCTGAGGGACCTATATCACGCGGCTCTGCCCTCCCCTGGAG
AGGTCCTGTCTCTTAAGCTGTGCCCTATCGGCGCCGAGCAAGCGGCGCGG
GCCCACCGGCACACGGGGGCGGCGGAAGGGGAGATGCCCTCCGGGGATGC
GCTGGCAGTCGTCTACCTCTTCCAACAGTTCAAACCCAAGGCCTTTCTCA
TGCTCCTTTCCGCCATGCTCTGCGAGCGTCGAGTGTGTTTGGTTGCCTCG
GAGACGGACATGCTTCTCGCCTGCACGCAAGCGGCCCTTGGCCTCCTCTA
CCCCTTCACCTGGCAACACGACTTCTTTCCCGTCCTCCCCCCATCCCTCC
TCTCTCGCGCTGCCGCTCCTCGACCCATCGTCTTCGGCCTCCGCCGCCAA
CATTTGCCGCTTCTTCGTCGCTCCCTTCTCCACGACGACCTGATCTACGC
GGACCTGGACCTCGGCAACCTCAGTGGATCTGGCGCCGCCCCGGCTCCTG
ACATCTACGCCCTGCCCAACACCAGCCAGGTCGTCCAGGCTGCTCAAAAG
CTGGGGGTGGAGGCGGCCAAGGCGGCCGAGAGGATCGACAAGGCGATTAG
CAAGGGCGTGGCCTTCCTGCAGAAGTACACGGGACAGCCGTCGGGGAGGG
AGTCGGAGGAGCCCCGACCGGACGCGGCCAACCTTTTGTCCTGGGAGCTC
TCTCTTCAGGGACAAACCCGAGCCTCCAATCCAATCGCCTGGCCCAGCTA
TGGGGGAGGAGGGGAGGGAGTCGGAGGCCAAGGGGGCGGGCGGGTGGCGG
CAGTGAAGACGGCCGTGGACAAGAGCCTGGTGCAAGAGGAGCAGCAGCTC
CGGGACGCGCTTTTGGGGTTTTTTGTGAACATTGTGGGCGACGCAAGCAC
GTACCTGCGGCTGGACCGGTCCGGGAAGCTGGTGCTGGACAGAGACTTCT
ACATAGGCAGCCGGGGCTTGATGGGGGACGGGCCGCACTTGAGCAATTTC
CTCCTCGAGCTGGTGCAGTCCCGGGCGTTCGACCGCCTGGCAGAAACGCG
CAAAGTGCAGATGGCGGTGGAGATGGGTGCCCCAAGGGCAGTACAAGGAA
GAGAAAGGATAGAGGGAGGAGTTGGACCCTTTTATCGATGTGTGGAGACA
GTCAGAGCGCGTGGAGAGACCTTTTCGACGAGCAACATCAAAAAAGCCCT
CAAAGCGCAGTCGCAGCAGCAAGCCGCGCTTCCTGCCAACCAGCAAGGGC
TGCTGGCGGAGGCGGAACAGACGTCCGGCCGTTGGACGGTGTTCCATGAC
TTAGTCTTGCAGCTGACTTCCAACTCGAGTCACAACATCTTGCCAGGGGA
GGCGGAGCGCATGATGCAGCAAGTGCTGGAGGACGCCTACTCCTCCACCC
TCCTTCCCTCCATCCTCCGCACCGTGTGGGCTCGCCTGGGCGATTGCAAA
GGCTCGAAGTGGAAGCATGCCCACAAATCACTCATGTTATTGCGCGAGCT
TCTGTTGTACGGACCTGAGGCGACGTTCTCTGTCGCTCTGTCTCAGGTGA
CCATCGTGCGGGCCCTTCTGCAGTACAAGGGAGGGGGTCTTGGGGGAAGT
GCGCAAACAAGCGTGGTCAGGGATGTGGCGCACGACCTCCTCTTTTTGCT
TCTTGATGGTCGCCGTTTTATGCTGGAGCGCGCAGTGCATTGGACCGGAG
AGAAAAAGGTGGAGGGGCCGGCTGTCATTTTGAACGCTCCGCATGCCTTC
AATTCTTCCTTCGCGGACCTGCACCACGCCCTAGCTCCGCCCGCACTCGC
TTCCAAAGAAGCTTACTCCTACGCGTCATTCTCTTCTCTGTCGCCAATAA
TTCCTGCCAAAAAGAGCTTGGCAGTGCCTGTTGATCTGCTGAGCAGCAAT
AGCGCCCTGGCAGGGAACGAGAAGGATGATCTGATGCCTTTGACCGAGGC
TCCGGCCTTTCGGACAGGAGGACCGATAGAGCACACGAACAACACCGAGC
AGTCGGTAGGCCCCCGACAGGGCGCAATCCCAAAGCTGTTGCCCCTTAAA
AAAGCGGCTGCAAATTTGCCGCAGGATGAGCTGCCGCCTCCCTTGGAAGG
CCATCCGCGAAAACCTCAGTGGGAGGTTTTCAGTCCCAATGCCGCCAGCG
GGGCCCTATCCTCTGCATCTACCTCATCCTCCAGCTCTTTGTCCTCTGCC
GCCCCCGCTGACTCCCAGTGGGAAGCGTTTCCTCAAACACTCGCAGCTGA
CCTTGCCATCAACGTACAGCAACCAGGGCAGCAAATGCCTCCTCCCAAAC
CTGCTCGCCCAATCCAATTACCCTCAGATGCCCTTCCTCCCATCCAGCCC
ATGCTTATTCCTTCTGTCACGGACCGGCAGCCGCAGCTTTCATCTCAAGG
AGATTCGCGTTCTATCGGAAACCCTTTTTTAACGAATGCCACGGGTCTCC
CGATGAGCGGATGCCGTGCTGATAACACCTCAGGGGCAGGGGGCAGGAGC
CTCTCGCCCACGAGCGGGATGAGAGGAATGACGATTGGAGCAAAGAGCGG
AGGGGAAACAGCCATCGGAGAAGGAGTGAGGATACAGGGTTCGATGGAGG
CTTTTGGTAGCGTGTGCGATCCCTTCGCTGAGATAGAGAAGAGCAGTGTG
TAG back to topprotein sequence of rna4545 >rna4545-protein ID=rna4545-protein|Name=rna4545|organism=Nannochloropsis gaditana|type=polypeptide|length=247bp
MFCVLLGDQVSTMEKIYTDLIDEVDEALRIRKLPPSSTGNASEATSQLYW
IGVCGAPASGKSTLTQEVARRLNDKGISTVVIPMDGYHFYKHELDSMPDA
HEMHARRGAPWTFNAVKFVQDLTNARRTSMGSFPSFDHHYGDPLEDQIQL
TPAQEVVIVEGNYLSLSSSPWCELKGLFDARWVLTCPTEVARERVIVRHL
STGDTLDEATRRADENDVPNGIMVEKEMSSTGWATRVIQSITDKLDA back to topmRNA from alignment at CM002463.1:882426..884011- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4545 ID=rna4545|Name=rna4545|organism=Nannochloropsis gaditana|type=mRNA|length=1586bp|location=Sequence derived from alignment at CM002463.1:882426..884011- (Nannochloropsis gaditana)
ATGTTTTGTGTTATTGATACTCATAATCAAGCATATTAGACGTCGTCATC
GTGGTCTATTAGAAGAGAGCAAGGCCGGAGGTATCATGGGTTGGCATCCG
TGAACGGCAGGTAAAGAATTGTCGACCGCAATTACTCGAGTCGACCACAT
ATTTACACACCCTTCGCGCAAAATACGGTGGCATGCCTCTTCTCGTCGAG
CCGCACACGCTCCTTGAGCGTTTTCATCCCTCTCAAAGGCTAGAAAGCAA
TGAATGACTAGCATCCTATTTCATGATTTAAATACAGGTTTTATTAGGAG
ATCAAGTATCCACCATGTAGGTGCAAACAATAGCGACTTTACTCGATTTC
CCTGTTTCCCTGATGTAAGCGCGTGCCCCCCCTAAAAAGGGAAAAAATAT
ACACAGACCTCATCGACGAAGTAGATGAGGCTCTTAGGATCAGGAAATTG
CCACCCTCCTCCACTGGAAATGCATCGGAGGCGACATCTCAGCTTTACTG
GATTGGTGTTTGCGGGGCACCGGCGTCGGGAAAGTCAACTTTGACCCAAG
AGGTTGCCCGGCGACTCAATGATAAAGGAATCTCGACTGTAGTCATTCCT
ATGGATGGCTACCATTTTTATAAACACGAGCTGGATTCTATGCCTGATGC
ACATGAAATGCACGCCCGGCGCGGGGCGCCTTGGACTTTTAATGTACGTG
CTACGATTGTTGAATGGGTCGCATACGATTTCACGTGCGTGACACTCACA
GTGCTTAAAAGGCAGCATGCCCTATCGTGATCATTTTGTACTCACTCAAA
TCGATGACTTGTTTGGAATCGATGGCAATTTATTTTTGCAATCCTACCGT
GTGATTCGTGATACACCCATGTTCGATATTGACTTTGCCATCTTTCTGAT
TTTTTCATAAAACGCATCAAGGCTGTCAAATTTGTCCAAGATTTGACTAA
CGCACGTCGGACATCAATGGGATCGTTCCCATCATTTGACCACCATTATG
GGGATCCGCTTGAGGACCAGATCCAAGTAAGGCCACGAGGGAGGTGTGTG
AAAGGAACTTTAACGGGGGAACTTTAAGAGACACATTAATCTATGACCAA
TCGCTCTTTAAGTATAGCTGTGAAAGACACTGTGTAAATCTGGATTGGTA
TAATCATGACAATCTTTTTTGTTTGCGCGAACCTTCTCTCTTGAAGGATA
TTTCGCCATAATCTCTTTATCAAAACAATTGTTTTACAACTTCAACCTAT
GATTGCCTTTTCCACAAATTTTGGTCTAAATGAGTACAGCTTACACCGGC
ACAAGAAGTAGTGATCGTTGAAGGAAATTATTTGTCTCTATCATCAAGTC
CTTGGTGTGAGCTCAAAGGGCTCTTCGATGCTCGCTGGGTTCTAACATGT
CCTACTGAGGTGGCTCGGGAGCGCGTCATTGTGAGGCATCTTTCCACAGG
TGATACTTTGGATGAAGCTACTCGGAGGGCGGACGAGAACGATGTCCCCA
ATGGCATTATGGTTGAGAAGGAGATGTCTTCAACTGGATGGGCGACACGA
GTTATCCAGAGCATCACAGATAAACTCGATGCTTAA back to topCoding sequence (CDS) from alignment at CM002463.1:882426..884011- >rna4545 ID=rna4545|Name=rna4545|organism=Nannochloropsis gaditana|type=CDS|length=3720bp|location=Sequence derived from alignment at CM002463.1:882426..884011- (Nannochloropsis gaditana)
CTTACACCGGCACAAGAAGTAGTGATCGTTGAAGGAAATTATTTGTCTCT
ATCATCAAGTCCTTGGTGTGAGCTCAAAGGGCTCTTCGATGCTCGCTGGG
TTCTAACATGTCCTACTGAGGTGGCTCGGGAGCGCGTCATTGTGAGGCAT
CTTTCCACAGGTGATACTTTGGATGAAGCTACTCGGAGGGCGGACGAGAA
CGATGTCCCCAATGGCATTATGGTTGAGAAGGAGATGTCTTCAACTGGAT
GGGCGACACGAGTTATCCAGAGCATCACAGATAAACTCGATGCTTAAGCT
GTCAAATTTGTCCAAGATTTGACTAACGCACGTCGGACATCAATGGGATC
GTTCCCATCATTTGACCACCATTATGGGGATCCGCTTGAGGACCAGATCC
AAGGAAAAAATATACACAGACCTCATCGACGAAGTAGATGAGGCTCTTAG
GATCAGGAAATTGCCACCCTCCTCCACTGGAAATGCATCGGAGGCGACAT
CTCAGCTTTACTGGATTGGTGTTTGCGGGGCACCGGCGTCGGGAAAGTCA
ACTTTGACCCAAGAGGTTGCCCGGCGACTCAATGATAAAGGAATCTCGAC
TGTAGTCATTCCTATGGATGGCTACCATTTTTATAAACACGAGCTGGATT
CTATGCCTGATGCACATGAAATGCACGCCCGGCGCGGGGCGCCTTGGACT
TTTAATGTTTTATTAGGAGATCAAGTATCCACCATATGTTTTGTCTTACA
CCGGCACAAGAAGTAGTGATCGTTGAAGGAAATTATTTGTCTCTATCATC
AAGTCCTTGGTGTGAGCTCAAAGGGCTCTTCGATGCTCGCTGGGTTCTAA
CATGTCCTACTGAGGTGGCTCGGGAGCGCGTCATTGTGAGGCATCTTTCC
ACAGGTGATACTTTGGATGAAGCTACTCGGAGGGCGGACGAGAACGATGT
CCCCAATGGCATTATGGTTGAGAAGGAGATGTCTTCAACTGGATGGGCGA
CACGAGTTATCCAGAGCATCACAGATAAACTCGATGCTTAAGCTGTCAAA
TTTGTCCAAGATTTGACTAACGCACGTCGGACATCAATGGGATCGTTCCC
ATCATTTGACCACCATTATGGGGATCCGCTTGAGGACCAGATCCAAGGAA
AAAATATACACAGACCTCATCGACGAAGTAGATGAGGCTCTTAGGATCAG
GAAATTGCCACCCTCCTCCACTGGAAATGCATCGGAGGCGACATCTCAGC
TTTACTGGATTGGTGTTTGCGGGGCACCGGCGTCGGGAAAGTCAACTTTG
ACCCAAGAGGTTGCCCGGCGACTCAATGATAAAGGAATCTCGACTGTAGT
CATTCCTATGGATGGCTACCATTTTTATAAACACGAGCTGGATTCTATGC
CTGATGCACATGAAATGCACGCCCGGCGCGGGGCGCCTTGGACTTTTAAT
GTTTTATTAGGAGATCAAGTATCCACCATATGTTTTGTCTTACACCGGCA
CAAGAAGTAGTGATCGTTGAAGGAAATTATTTGTCTCTATCATCAAGTCC
TTGGTGTGAGCTCAAAGGGCTCTTCGATGCTCGCTGGGTTCTAACATGTC
CTACTGAGGTGGCTCGGGAGCGCGTCATTGTGAGGCATCTTTCCACAGGT
GATACTTTGGATGAAGCTACTCGGAGGGCGGACGAGAACGATGTCCCCAA
TGGCATTATGGTTGAGAAGGAGATGTCTTCAACTGGATGGGCGACACGAG
TTATCCAGAGCATCACAGATAAACTCGATGCTTAAGCTGTCAAATTTGTC
CAAGATTTGACTAACGCACGTCGGACATCAATGGGATCGTTCCCATCATT
TGACCACCATTATGGGGATCCGCTTGAGGACCAGATCCAAGGAAAAAATA
TACACAGACCTCATCGACGAAGTAGATGAGGCTCTTAGGATCAGGAAATT
GCCACCCTCCTCCACTGGAAATGCATCGGAGGCGACATCTCAGCTTTACT
GGATTGGTGTTTGCGGGGCACCGGCGTCGGGAAAGTCAACTTTGACCCAA
GAGGTTGCCCGGCGACTCAATGATAAAGGAATCTCGACTGTAGTCATTCC
TATGGATGGCTACCATTTTTATAAACACGAGCTGGATTCTATGCCTGATG
CACATGAAATGCACGCCCGGCGCGGGGCGCCTTGGACTTTTAATGTTTTA
TTAGGAGATCAAGTATCCACCATATGTTTTGTCTTACACCGGCACAAGAA
GTAGTGATCGTTGAAGGAAATTATTTGTCTCTATCATCAAGTCCTTGGTG
TGAGCTCAAAGGGCTCTTCGATGCTCGCTGGGTTCTAACATGTCCTACTG
AGGTGGCTCGGGAGCGCGTCATTGTGAGGCATCTTTCCACAGGTGATACT
TTGGATGAAGCTACTCGGAGGGCGGACGAGAACGATGTCCCCAATGGCAT
TATGGTTGAGAAGGAGATGTCTTCAACTGGATGGGCGACACGAGTTATCC
AGAGCATCACAGATAAACTCGATGCTTAAGCTGTCAAATTTGTCCAAGAT
TTGACTAACGCACGTCGGACATCAATGGGATCGTTCCCATCATTTGACCA
CCATTATGGGGATCCGCTTGAGGACCAGATCCAAGGAAAAAATATACACA
GACCTCATCGACGAAGTAGATGAGGCTCTTAGGATCAGGAAATTGCCACC
CTCCTCCACTGGAAATGCATCGGAGGCGACATCTCAGCTTTACTGGATTG
GTGTTTGCGGGGCACCGGCGTCGGGAAAGTCAACTTTGACCCAAGAGGTT
GCCCGGCGACTCAATGATAAAGGAATCTCGACTGTAGTCATTCCTATGGA
TGGCTACCATTTTTATAAACACGAGCTGGATTCTATGCCTGATGCACATG
AAATGCACGCCCGGCGCGGGGCGCCTTGGACTTTTAATGTTTTATTAGGA
GATCAAGTATCCACCATATGTTTTGTCTTACACCGGCACAAGAAGTAGTG
ATCGTTGAAGGAAATTATTTGTCTCTATCATCAAGTCCTTGGTGTGAGCT
CAAAGGGCTCTTCGATGCTCGCTGGGTTCTAACATGTCCTACTGAGGTGG
CTCGGGAGCGCGTCATTGTGAGGCATCTTTCCACAGGTGATACTTTGGAT
GAAGCTACTCGGAGGGCGGACGAGAACGATGTCCCCAATGGCATTATGGT
TGAGAAGGAGATGTCTTCAACTGGATGGGCGACACGAGTTATCCAGAGCA
TCACAGATAAACTCGATGCTTAAGCTGTCAAATTTGTCCAAGATTTGACT
AACGCACGTCGGACATCAATGGGATCGTTCCCATCATTTGACCACCATTA
TGGGGATCCGCTTGAGGACCAGATCCAAGGAAAAAATATACACAGACCTC
ATCGACGAAGTAGATGAGGCTCTTAGGATCAGGAAATTGCCACCCTCCTC
CACTGGAAATGCATCGGAGGCGACATCTCAGCTTTACTGGATTGGTGTTT
GCGGGGCACCGGCGTCGGGAAAGTCAACTTTGACCCAAGAGGTTGCCCGG
CGACTCAATGATAAAGGAATCTCGACTGTAGTCATTCCTATGGATGGCTA
CCATTTTTATAAACACGAGCTGGATTCTATGCCTGATGCACATGAAATGC
ACGCCCGGCGCGGGGCGCCTTGGACTTTTAATGTTTTATTAGGAGATCAA
GTATCCACCATATGTTTTGT back to top
|