EWM26135.1, cds4533 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26135.1 vs. NCBI_GenBank
Match: gi|585108129|gb|EWM26135.1| (phosphoribulokinase uridine kinase family protein [Nannochloropsis gaditana]) HSP 1 Score: 517.694 bits (1332), Expect = 0.000e+0 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
Query: 1 MFCVLLGDQVSTMEKIYTDLIDEVDEALRIRKLPPSSTGNASEATSQLYWIGVCGAPASGKSTLTQEVARRLNDKGISTVVIPMDGYHFYKHELDSMPDAHEMHARRGAPWTFNAVKFVQDLTNARRTSMGSFPSFDHHYGDPLEDQIQLTPAQEVVIVEGNYLSLSSSPWCELKGLFDARWVLTCPTEVARERVIVRHLSTGDTLDEATRRADENDVPNGIMVEKEMSSTGWATRVIQSITDKLDA 247
MFCVLLGDQVSTMEKIYTDLIDEVDEALRIRKLPPSSTGNASEATSQLYWIGVCGAPASGKSTLTQEVARRLNDKGISTVVIPMDGYHFYKHELDSMPDAHEMHARRGAPWTFNAVKFVQDLTNARRTSMGSFPSFDHHYGDPLEDQIQLTPAQEVVIVEGNYLSLSSSPWCELKGLFDARWVLTCPTEVARERVIVRHLSTGDTLDEATRRADENDVPNGIMVEKEMSSTGWATRVIQSITDKLDA
Sbjct: 1 MFCVLLGDQVSTMEKIYTDLIDEVDEALRIRKLPPSSTGNASEATSQLYWIGVCGAPASGKSTLTQEVARRLNDKGISTVVIPMDGYHFYKHELDSMPDAHEMHARRGAPWTFNAVKFVQDLTNARRTSMGSFPSFDHHYGDPLEDQIQLTPAQEVVIVEGNYLSLSSSPWCELKGLFDARWVLTCPTEVARERVIVRHLSTGDTLDEATRRADENDVPNGIMVEKEMSSTGWATRVIQSITDKLDA 247
BLAST of EWM26135.1 vs. NCBI_GenBank
Match: gi|1140863216|ref|WP_076718274.1| (uridine kinase [Motiliproteus sp. MSK22-1] >gi|1134398361|gb|OMH36203.1| uridine kinase [Motiliproteus sp. MSK22-1]) HSP 1 Score: 193.741 bits (491), Expect = 1.637e-58 Identity = 103/234 (44.02%), Postives = 141/234 (60.26%), Query Frame = 0
Query: 8 DQVSTMEKIYTDLIDEVDEALRIRKLPPSSTGNASEATSQLYWIGVCGAPASGKSTLTQEVARRLNDKGISTVVIPMDGYHFYKHELDSMPDAHEMHARRGAPWTFNAVKFVQDLTNARRTSMGSFPSFDHHYGDPLEDQIQL-TPAQEVVIVEGNYLSLSSSPWCELK-GLFDARWVLTCPTEVARERVIVRHLSTGDTLDEATRRADENDVPNGIMVEKEMSSTGWATRVIQ 239
+Q +++ T+L+ ++D+ E SQ YWIG+ G P SGKST+ E+ RL +IPMDGYH+Y+HELD M D HARRGAP+TFNA +FV DLT A++ G+FP FDH+ GDP+E I L T ++V+VEGNYL L SPWC LK +FD W+L P + RV RHL+TG T ++A R ++ND PN ++ +ST A R+I+
Sbjct: 2 EQSKIYDQLATELMKKIDQL---------------EDNSQ-YWIGLAGVPGSGKSTIAAELKHRLES---LLTIIPMDGYHYYRHELDQMDDPKLAHARRGAPFTFNAKRFVADLTEAKKLGTGTFPDFDHNVGDPIEGAITLTTKTPQIVLVEGNYLLLDDSPWCLLKEQVFDETWLLYVPHAESHRRVYQRHLTTGLTENQARFRVEQNDSPNAELI--TTASTKNANRIIK 214
BLAST of EWM26135.1 vs. NCBI_GenBank
Match: gi|503424681|ref|WP_013659342.1| (uridine kinase [Marinomonas mediterranea] >gi|326544215|gb|ADZ89435.1| phosphoribulokinase/uridine kinase family protein [Marinomonas mediterranea MMB-1]) HSP 1 Score: 182.956 bits (463), Expect = 2.715e-54 Identity = 85/177 (48.02%), Postives = 114/177 (64.41%), Query Frame = 0
Query: 49 YWIGVCGAPASGKSTLTQEVARRLNDKGISTVVIPMDGYHFYKHELDSMPDAHEMHARRGAPWTFNAVKFVQDLTNARRTSMGSFPSFDHHYGDPLEDQIQLTPAQEVVIVEGNYLSLSSSPWCELKG-LFDARWVLTCPTEVARERVIVRHLSTGDTLDEATRRADENDVPNGIMV 224
YWIG+ GAP SGKST ++ L D+ V+IPMDGYH Y+H+LD MP+ E + RRGAP+TF+AV+ V +L A+ G FPSFDHH GDP+E+ I+L ++V+VEGNYL L+ PW LK +FD W L P V+ +RV RH+ TG T +A +R ND N ++
Sbjct: 23 YWIGLVGAPGSGKSTFAAQLKDALGDR---LVIIPMDGYHLYRHQLDQMPNREEAYIRRGAPFTFDAVRLVLELVAAKHNGSGVFPSFDHHKGDPIENDIELKSTDQIVLVEGNYLLLNEEPWNRLKAEVFDETWFLDVPISVSNQRVAERHIKTGLTAPQAWQRVMTNDGLNAELI 196
BLAST of EWM26135.1 vs. NCBI_GenBank
Match: gi|739708261|ref|WP_037562239.1| (uridine kinase [Spirochaeta odontotermitis] >gi|699057627|gb|KGM43332.1| uridine kinase [Spirochaeta odontotermitis]) HSP 1 Score: 182.57 bits (462), Expect = 3.615e-54 Identity = 100/216 (46.30%), Postives = 126/216 (58.33%), Query Frame = 0
Query: 25 DEALRIRKLPPSSTGNASEATSQLYWIGVCGAPASGKSTLTQEVARRLNDKGISTVVIPMDGYHFYKHELDSMPDAHEMHARRGAPWTFNAVKFVQDLTNARRTSMGSFPSFDHHYGDPLEDQIQLTPAQEVVIVEGNYLSLSSSPWCELK-GLFDARWVLTCPTEVARERVIVRHLSTGDTLDEATRRADENDVPNGIMVEKEMSSTGWATRVIQ 239
D A +R+ TGN QL WIG+ G P SGKSTL + + RL + V+P+DGYH+Y+ ELD M D E HARRGAP+TFNA KFV DL AR G FPSFDH GDP+E IQL ++V+VEGNYL L++ PW L+ +FD W L +RV RH+ TG T + A RR ND N ++ K S G A R+I+
Sbjct: 6 DLAAELRQKAARLTGN-----KQL-WIGLAGGPGSGKSTLAEALKSRLPE---LLTVVPLDGYHYYRSELDRMQDPAEAHARRGAPFTFNAKKFVDDLVKARNAGEGVFPSFDHGAGDPVEADIQLLKGPQIVLVEGNYLLLNTEPWIHLRTSVFDETWFLDVAVSECNQRVYERHIKTGKTEEHAQRRVTTNDSLNAELIVK--VSPGNADRIIR 210
BLAST of EWM26135.1 vs. NCBI_GenBank
Match: gi|1126536019|ref|WP_075173609.1| (uridine kinase [Neptunomonas phycophila]) HSP 1 Score: 181.8 bits (460), Expect = 7.661e-54 Identity = 89/187 (47.59%), Postives = 121/187 (64.71%), Query Frame = 0
Query: 41 ASEATSQLYWIGVCGAPASGKSTLTQEVARRLNDKGISTVVIPMDGYHFYKHELDSMPDAHEMHARRGAPWTFNAVKFVQDLTNARRTSMGSFPSFDHHYGDPLEDQIQLTPAQEVVIVEGNYLSLSSSPWCELK-GLFDARWVLTCPTEVARERVIVRHLSTGDTLDEATRRADENDVPNGIMVEK 226
AS A +Q WIG+ GAP SGKST+ QE+ ++ ++ +VIP DGYH+Y+HELD+M + MH RRGA +TFNA K V DL AR+ G FPSFDH GDP+E+ I L+ V+IVEG++L L SPWC LK +FD W + + + RV RH+S G T ++A++R NDV N ++ K
Sbjct: 16 ASLAHNQQLWIGLAGAPGSGKSTIAQELKAQIGEQ---LLVIPQDGYHYYRHELDTMDNPTYMHVRRGASFTFNADKLVADLVTARQKGEGCFPSFDHGVGDPVENDIHLSRQHRVIIVEGSFLLLDESPWCNLKTHVFDESWFINISLDESNRRVTGRHVSLGLTPEQASQRVAANDVINAELITK 199
BLAST of EWM26135.1 vs. NCBI_GenBank
Match: gi|1126542877|ref|WP_075179723.1| (uridine kinase [Neptunomonas phycophila]) HSP 1 Score: 181.03 bits (458), Expect = 1.767e-53 Identity = 90/187 (48.13%), Postives = 120/187 (64.17%), Query Frame = 0
Query: 41 ASEATSQLYWIGVCGAPASGKSTLTQEVARRLNDKGISTVVIPMDGYHFYKHELDSMPDAHEMHARRGAPWTFNAVKFVQDLTNARRTSMGSFPSFDHHYGDPLEDQIQLTPAQEVVIVEGNYLSLSSSPWCELK-GLFDARWVLTCPTEVARERVIVRHLSTGDTLDEATRRADENDVPNGIMVEK 226
AS A +Q WIG+ GAP SGKST+ QE+ ++ G +VIP DGYH+Y+HELD+M + MH RRGA +TFNA K V DL AR+ G FPSFDH GDP+E+ I L+ V+IVEG++L L SPWC LK +FD W + + + RVI RH+S G T ++A++R ND N ++ K
Sbjct: 16 ASLAHNQQLWIGLAGAPGSGKSTIAQELKAQI---GEPLLVIPQDGYHYYRHELDTMDNPTHMHVRRGASFTFNADKLVADLVTARQKGEGCFPSFDHGVGDPVENDIHLSRQHRVIIVEGSFLLLDESPWCNLKTHVFDESWFINISLDESNRRVIGRHVSLGLTPEQASQRVAANDGINAEIITK 199
BLAST of EWM26135.1 vs. NCBI_GenBank
Match: gi|299473453|emb|CBN77850.1| (phosphoribulokinase/uridine kinase family protein [Ectocarpus siliculosus]) HSP 1 Score: 187.578 bits (475), Expect = 9.771e-53 Identity = 90/179 (50.28%), Postives = 119/179 (66.48%), Query Frame = 0
Query: 50 WIGVCGAPASGKSTLTQEVARRLNDKGISTVVIPMDGYHFYKHELDSMPDAHEMHARRGAPWTFNAVKFVQDLTNARRTSMGSFPSFDHHYGDPLEDQIQLTPAQEVVIVEGNYLSLSS-SPWCELKGLFDARWVLTCPTEVARERVIVRHLSTGDTLDEATRRADENDVPNGIMVEKE 227
W+ V GAP SGK+TL EV +R+ + IS + +PMDGYH Y+ ELD +PD E H RRGA WTF+ +F+ +L +ARR+ GSFP FDH GDP+E+Q + P+ VVIVEGNYL L PW ++ GLFD W + CP EV ERV RH+STG +EA R + ND+ N +V ++
Sbjct: 335 WVAVAGAPGSGKTTLAAEVCQRVQSEEISAICLPMDGYHLYRRELDLLPDPREAHRRRGAHWTFDGRRFLSELGDARRSGRGSFPGFDHARGDPVENQWMVQPSHSVVIVEGNYLLLKGVDPWNQVGGLFDVTWAIRCPPEVCGERVRRRHMSTGLEEEEARARVEGNDLLNARLVSEK 513
BLAST of EWM26135.1 vs. NCBI_GenBank
Match: gi|551657080|ref|XP_005831312.1| (hypothetical protein GUITHDRAFT_139875 [Guillardia theta CCMP2712] >gi|428175442|gb|EKX44332.1| hypothetical protein GUITHDRAFT_139875 [Guillardia theta CCMP2712]) HSP 1 Score: 178.718 bits (452), Expect = 1.705e-52 Identity = 97/233 (41.63%), Postives = 137/233 (58.80%), Query Frame = 0
Query: 13 MEKIYTDLIDEVDEALRIRKLPPSSTGNASEATSQLYWIGVCGAPASGKSTLTQEVARRLNDKGISTVVIPMDGYHFYKHELDSMPDAHEMHARRGAPWTFNAVKFVQDLTNARRTSMGSFPSFDHHYGDPLEDQIQLTPAQEVVIVEGNYLSLSS-SPWCELKGLFDARWVLTCPTEVARERVIVRH-LSTGDTLDEATRRADENDVPNGIMVEKEMSSTGWATRVIQSITD 243
M + +L+D + L+ K P S QL WI + G P SGKST+ ++ L+ +G+ ++PMDG+H+Y+ ELD+M + E HARRGA WTFNA KFV L + G PSFDH +GDP+ED I + V++VEGNY+ L PW +L+ LFD +W++ CP V RERVI R+ ++ G + RR DEND+ N +V + S+ +A RVI S D
Sbjct: 1 MNCVLLELVDHIVRRLQDEKDPHSG--------KQL-WIALAGPPGSGKSTICSKLVSSLSGRGVPAAILPMDGFHYYRSELDTMQNREEAHARRGAHWTFNAHKFVDMLARMKDEGSGRAPSFDHAHGDPVEDAISIEREHRVILVEGNYVLLYDIEPWRKLQHLFDEKWLIVCPEHVLRERVIQRNSVAWGWDRERTARRVDENDMVNARLVME--VSSKYAERVITSQQD 222
BLAST of EWM26135.1 vs. NCBI_GenBank
Match: gi|500095058|ref|WP_011771065.1| (uridine kinase [Psychromonas ingrahamii] >gi|119865033|gb|ABM04510.1| phosphoribulokinase/uridine kinase family protein [Psychromonas ingrahamii 37]) HSP 1 Score: 177.563 bits (449), Expect = 3.528e-52 Identity = 97/227 (42.73%), Postives = 131/227 (57.71%), Query Frame = 0
Query: 15 KIYTDLIDEV-DEALRIRKLPPSSTGNASEATSQLYWIGVCGAPASGKSTLTQEVARRLNDKGISTVVIPMDGYHFYKHELDSMPDAHEMHARRGAPWTFNAVKFVQDLTNARRTSMGSFPSFDHHYGDPLEDQIQLTPAQEVVIVEGNYLSLSSSPWCELKG-LFDARWVLTCPTEVARERVIVRHLSTGDTLDEATRRADENDVPNGIMVEKEMSSTGWATRVIQ 239
K Y L D++ D++L++R A +Q YWI + GAP SGKSTL + + RL G +IPMDG+H+Y+HELD M D E +ARRGAP+TFNA KFV + AR+ G FP FDH+ GDP+E+ I L ++V++EGNYL L PW +L+ +FD W L P RV RH+ TG T +A R ND N +V + S A R+I+
Sbjct: 2 KDYDQLADQLRDKSLKLR------------AGAQ-YWIALAGAPGSGKSTLAEALKSRL---GELLTIIPMDGFHYYRHELDKMNDPAEAYARRGAPFTFNAPKFVNAVIKARQEGEGLFPGFDHNSGDPVENDISLNKDSKIVLIEGNYLLLDEKPWSQLQNKVFDETWFLYVPLPECNRRVCARHMKTGLTKQQAQHRVASNDSLNAQLVTE--VSIKNAQRIIR 210
BLAST of EWM26135.1 vs. NCBI_GenBank
Match: gi|571557833|ref|XP_006604481.1| (PREDICTED: putative uridine kinase C227.14 isoform X2 [Glycine max] >gi|947045988|gb|KRG95617.1| hypothetical protein GLYMA_19G161200 [Glycine max]) HSP 1 Score: 176.022 bits (445), Expect = 2.141e-50 Identity = 101/254 (39.76%), Postives = 138/254 (54.33%), Query Frame = 0
Query: 2 FCVLLGDQVSTMEKIYTDLIDEVDEALRIRKLPPSSTGNASEATSQLYWIGVCGAPASGKSTLTQEVARRLN----DKGIS----------TVVIPMDGYHFYKHELDSMPDAHEMHARRGAPWTFNAVKFVQDLTNARRTSMGSFPSFDHHYGDPLEDQIQLTPAQEVVIVEGNYLSLSSSPWCELKGLFDARWVLTCPTEVARERVIVRHLSTGDTLDEATRRADENDVPNGIMVEKEMSSTGWATRVIQSI 241
F +L + + + +DE+ +AL R LP S S + +G+ G P +GKSTL EVARR+N +K S +V+PMDG+H Y+ ELD M + E HARRGAPWTFN ++ +Q L N R PSFDH GDP+ED I + +VVIVEGNYL L W E+ LFD +W + + A +RV+ RH+STG D A +R + ND N ++ M S A +I+SI
Sbjct: 53 FFKVLSAEKEQIHVVEGSRVDELYDALVTRILPLVSV---SSNPNHKLLVGLAGPPGAGKSTLAHEVARRINKLWPEKASSFDSQVQLPDVAIVVPMDGFHLYRSELDEMENPEEAHARRGAPWTFNPLRLLQCLKNLRMHGSVYVPSFDHGVGDPVEDDIFVNLQHKVVIVEGNYLLLEDGVWKEISSLFDEKWFIDIDIDKAMQRVLKRHISTGKPPDIAKQRIENNDRLNAELI---MKSKKNADIIIKSI 300 The following BLAST results are available for this feature:
BLAST of EWM26135.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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