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Properties
| Property Name | Value |
|---|
| Product | phosphoglycerate kinase |
| Orig transcript id | gnl|cribi|Naga_100014g18.9291.mrna |
| Orig protein id | gnl|cribi|Naga_100014g18.9291 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:872455..875221 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4541 ID=rna4541|Name=rna4541|organism=Nannochloropsis gaditana|type=mRNA|length=2079bp
AAGACAAGGCTGTGGCGAAGTCAGGCAATAGATGCCTCTAACCGAGACAC
AAATCGTTATCGGAATGAATCGGTGTCCGGCTCGGATATGTGATAAATGC
GTTGTCGGCCAGGTGTGGAAATAAGGGCGCGTCGATGATAGATAAGGCTG
TGAGGTATCCAAACAACCTCCCTGCGCAACCCAGTACATCGCATCTTTAC
GTCGCGGGCTTGTACCGCCTGGGCCATGCACACTCATCCTTGCGCACTTG
CGCTGTATAAACAGGACTTTCTTCCTTCTTAAGCTTTCTATCGTCGTCGT
CATGTCTGGCAAGGAAACCCTCAAAAGTCTGGCAAGCAAGATCGATCTCA
AGAATCAACGTGTCTTCTGTCGAGTGGACTTCAATGGTACGTCTTACTGG
TCTGGAGTCATGAGGATCTACGTGCGGTCACTCCCAACCCTGACCGCTTC
CCCACTTCCCCTCTCTCCTGTCACAGTTCCCCTCGACAAAGAGGCGAAAG
TCACGGACGATACGCGCATCCGCGCTGCCCTCCCCACCATCAAGTTTCTC
GTGGAGAAAGGCGCCCGAGTCGTCCTCTGCAGCCACCTGGGCCGCCCCAA
AGGCGTTACCGAGTCCTTGCGCATGGCGCCCGTGGCCACCCGCCTCTCTG
AGTTGCTGGGTTCCGAGGTGAAGTACGTGAAGGATTGCGTGGGAGAGGAG
GTTGAGCAGCAAGTGGAAGCCCTCTCTGCGGGCCAGGTCCTCCTGCTCGA
AAACGTTCGTTTCTACAAGGAGGAGGAGAAGAACGCGCCGGAGTTCGCGG
CTAAACTTGCGCGTTTGGCGGATGTGTATGTCAACGACGCCTTTGGGACG
GCTCACCGCGCGCATGCCTCCACGGAGGGCATTGCCAAGCTGGTGAAGAC
GACGTGCGCGGGTTTTTTGATGGAGAAGGAGCTGTCCTACCTGGATGGGG
CCGTGTCCAAGCCCACGCGGCCCTTTGCGGCGATTGTCGGGGGGTCAAAG
GTCTCCACGAAGATTACGGTGGTGGAGACTCTGATCAACAAGGTGGACAA
GCTCATTATCGGCGGCGGCATGGTGTTCACATTCCTCAAGGCTCAAGGGC
ACGGTGTGGGCTCCTCGCTCGTGGAGGAAGATTTCTTGGAACTCGCGAAG
AAACTGGAGTCCATGGCGAAAGAGAAGGGTGTGAAGCTCATTCTTCCCAC
CGACGTGGTAATTGCCGACAAATTCTCGGCGGACGCGCAGAGTAAGGTCG
TGCCTGCCACGGAGATCCCCGACGGTTGGATGGGCCTGGACAACGGCCCC
GAGACGACCAAGATGATCCAGGCGGAGCTGGCGGATTGCAAGACCATCAT
TTGGAACGGGCCCATGGGGGTGTTCGAATTTGAAAAGTTCGCGGCGGGGA
CTTCGGCCATCGCAAAGACATTGGCAGAGCTGACTTCGAAGGGGGCGACC
ACTATCGTCGGCGGCGGGGACTCCGTGGCGGCGGTGGAGCAAGCGGGCCT
GGCGGATAAGCTGTCTCACGTGTCGACGGGTGGGGGGGCGTCCCTGGAGA
TGCTAGAGGGTCGCACGCTGCCCGGCGTCGCTGCGATCCAAGATGCTCAG
TGAAAAGATACCGAAAGGAGACCAGGATTCTCCCGGCAGAAAGCGGTACG
TGGCTCCAGATTATGAACTAGATATAGGTGGCAATTGCCGGGCTCGCAGA
GAGGAAGATCCGGCAAATGGGATTCGATCCATGAATGGGCATTGGCTGAC
ATTTATACGAAATGTATGACCAGATTCAAGTTTTGTTGATGTTCTTGCGA
AGAATTTGAAAAAAGTGTTTGAGAGAGGAGCACTTTTGAAAGGCGTCATC
TGTGTTAAAGGCTGCACGAGAGATGTTCTGGGGGATGGTTATCCAGGCTA
TTTACGATCACAAACTTTTTCGCATCATTTCCTCTTGAACAGTTTTTTGT
TTCGTTATTTGCTTCACATACCGATGCAATTGCATCATGATTTGGTGATT
GAGCATCTGACAGCTCGGCAGATAGGTTTTCCTCACCCCTTCCTACTTGG
ATAAGTTGTACTGTCACTGCACTACTCCC back to topprotein sequence of rna4541 >rna4541-protein ID=rna4541-protein|Name=rna4541|organism=Nannochloropsis gaditana|type=polypeptide|length=375bp
MSGKETLKSLASKIDLKNQRVFCRVDFNGTSYWSGVMRIYVRSLPTLTAS
PLPLSPVTVPLDKEAKVTDDTRIRAALPTIKFLVVRTSPQCWLFGLHVMV
SSRKGILCPACARLFSSSSGVSNQSTVNALLVGLFNYLEYLTRDLPLPRV
ANPGQEKGARVVLCSHLGRPKGVTESLRMAPVATRLSELLGSEVKYVKDC
VGEEVEQQVEALSAGQVLLLENVRFYKEEEKNAPEFAAKLARLADVYVND
AFGTAHRAHASTEGIAKLVKTTCAGFLMEKELSYLDGAVSKPTRPFAAIV
GGSKVRTRGKRWRLIRRSEGVWCYSWRVWANIECRRLVCSAFLSLRGSPR
RWVADASYCDANLDLREMHLVIAHC back to topmRNA from alignment at CM002463.1:872455..875221- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4541 ID=rna4541|Name=rna4541|organism=Nannochloropsis gaditana|type=mRNA|length=2767bp|location=Sequence derived from alignment at CM002463.1:872455..875221- (Nannochloropsis gaditana)
AAGACAAGGCTGTGGCGAAGTCAGGCAATAGATGCCTCTAACCGAGACAC
AAATCGTTATCGGAATGAATCGGTGTCCGGCTCGGATATGTGATAAATGC
GTTGTCGGCCAGGTGTGGAAATAAGGGCGCGTCGATGATAGATAAGGCTG
TGAGGTATCCAAACAACCTCCCTGCGCAACCCAGTACATCGCATCTTTAC
GTCGCGGGCTTGTACCGCCTGGGCCATGCACACTCATCCTTGCGCACTTG
CGCTGTATAAACAGGACTTTCTTCCTTCTTAAGCTTTCTATCGTCGTCGT
CATGTCTGGTGAGTAGGTCTTGAGCTGTACGTGCTCGCCCCGACGCATCT
TGGAACAAAAAGTTCAACGCTGCAAATGCCCCACCATACGACCCTAGGCA
AGGAAACCCTCAAAAGTCTGGCAAGCAAGATCGATCTCAAGAATCAACGT
GTCTTCTGTCGAGTGGACTTCAATGGTACGTCTTACTGGTCTGGAGTCAT
GAGGATCTACGTGCGGTCACTCCCAACCCTGACCGCTTCCCCACTTCCCC
TCTCTCCTGTCACAGTTCCCCTCGACAAAGAGGCGAAAGTCACGGACGAT
ACGCGCATCCGCGCTGCCCTCCCCACCATCAAGTTTCTCGTGGTACGTAC
TTCACCACAGTGTTGGCTCTTCGGCCTCCATGTTATGGTCTCCAGCCGTA
AAGGAATCTTGTGCCCTGCCTGCGCCCGCCTGTTCAGCAGCTCTTCTGGT
GTTTCCAATCAAAGCACAGTGAATGCGCTTTTGGTAGGTCTATTCAACTA
TCTAGAATACCTCACACGCGACCTTCCACTCCCCCGTGTTGCCAACCCCG
GACAGGAGAAAGGCGCCCGAGTCGTCCTCTGCAGCCACCTGGGCCGCCCC
AAAGGCGTTACCGAGTCCTTGCGCATGGCGCCCGTGGCCACCCGCCTCTC
TGAGTTGCTGGGTTCCGAGGTGAAGTACGTGAAGGATTGCGTGGGAGAGG
AGGTTGAGCAGCAAGTGGAAGCCCTCTCTGCGGGCCAGGTCCTCCTGCTC
GAAAACGTTCGTTTCTACAAGGAGGAGGAGAAGAACGCGCCGGAGTTCGC
GGCTAAACTTGCGCGTTTGGCGGATGTGTATGTCAACGACGCCTTTGGGA
CGGCTCACCGCGCGCATGCCTCCACGGAGGGCATTGCCAAGCTGGTGAAG
ACGACGTGCGCGGGTTTTTTGATGGAGAAGGAGCTGTCCTACCTGGATGG
GGCCGTGTCCAAGCCCACGCGGCCCTTTGCGGCGATTGTCGGGGGGTCAA
AGGTAAGAACGAGAGGCAAGCGATGGCGTCTCATCAGACGTTCGGAAGGA
GTGTGGTGCTACTCGTGGCGTGTCTGGGCGAATATTGAGTGCCGCCGACT
CGTCTGCTCCGCGTTTCTTTCTCTCCGTGGGTCCCCTCGACGATGGGTCG
CAGACGCCAGTTATTGTGATGCCAATCTTGACTTGCGGGAAATGCATCTC
GTTATAGCCCACTGCTGAATGTACACCCCCCCGACCCCGCCCTGGGTCAT
CTCGTTTCGACCCTGCAGGTCTCCACGAAGATTACGGTGGTGGAGACTCT
GATCAACAAGGTGGACAAGCTCATTATCGGCGGCGGCATGGTGTTCACAT
TCCTCAAGGCTCAAGGGCACGGTGTACGTTCTCGGAGGCTTGTTAAGGCT
TATCCGGGACTGGGGAGGAACGCGTGCTGTCCCGGTCACTAGCTGACTCC
ATCCGTGTCCTATTTCCGACACTGACCTCCGCCACATTGACAGGTGGGCT
CCTCGCTCGTGGAGGAAGATTTCTTGGAACTCGCGAAGAAACTGGAGTCC
ATGGCGAAAGAGAAGGGTGTGAAGCTCATTCTTCCCACCGACGTGGTAAT
TGCCGACAAATTCTCGGCGGACGCGCAGAGTAAGGTCGTGCCTGCCACGG
AGATCCCCGACGGTTGGATGGGCCTGGACAACGGCCCCGAGACGACCAAG
ATGATCCAGGCGGAGCTGGCGGATTGCAAGACCATCATTTGGAACGGGCC
CATGGGGGTGTTCGAATTTGAAAAGTTCGCGGCGGGGACTTCGGCCATCG
CAAAGACATTGGCAGAGCTGACTTCGAAGGGGGCGACCACTATCGTCGGC
GGCGGGGACTCCGTGGCGGCGGTGGAGCAAGCGGGCCTGGCGGATAAGCT
GTCTCACGTGTCGACGGGTGGGGGGGCGTCCCTGGAGATGCTAGAGGGTC
GCACGCTGCCCGGCGTCGCTGCGATCCAAGATGCTCAGTGAAAAGATACC
GAAAGGAGACCAGGATTCTCCCGGCAGAAAGCGGTACGTGGCTCCAGATT
ATGAACTAGATATAGGTGGCAATTGCCGGGCTCGCAGAGAGGAAGATCCG
GCAAATGGGATTCGATCCATGAATGGGCATTGGCTGACATTTATACGAAA
TGTATGACCAGATTCAAGTTTTGTTGATGTTCTTGCGAAGAATTTGAAAA
AAGTGTTTGAGAGAGGAGCACTTTTGAAAGGCGTCATCTGTGTTAAAGGC
TGCACGAGAGATGTTCTGGGGGATGGTTATCCAGGCTATTTACGATCACA
AACTTTTTCGCATCATTTCCTCTTGAACAGTTTTTTGTTTCGTTATTTGC
TTCACATACCGATGCAATTGCATCATGATTTGGTGATTGAGCATCTGACA
GCTCGGCAGATAGGTTTTCCTCACCCCTTCCTACTTGGATAAGTTGTACT
GTCACTGCACTACTCCC back to topCoding sequence (CDS) from alignment at CM002463.1:872455..875221- >rna4541 ID=rna4541|Name=rna4541|organism=Nannochloropsis gaditana|type=CDS|length=2256bp|location=Sequence derived from alignment at CM002463.1:872455..875221- (Nannochloropsis gaditana)
GCAAGGAAACCCTCAAAAGTCTGGCAAGCAAGATCGATCTCAAGAATCAA
CGTGTCTTCTGTCGAGTGGACTTCAATGGTACGTCTTACTGGTCTGGAGT
CATGAGGATCTACGTGCGGTCACTCCCAACCCTGACCGCTTCCCCACTTC
CCCTCTCTCCTGTCACAGTTCCCCTCGACAAAGAGGCGAAAGTCACGGAC
GATACGCGCATCCGCGCTGCCCTCCCCACCATCAAGTTTCTCGTGGTACG
TACTTCACCACAGTGTTGGCTCTTCGGCCTCCATGTTATGGTCTCCAGCC
GTAAAGGAATCTTGTGCCCTGCCTGCGCCCGCCTGTTCAGCAGCTCTTCT
GGTGTTTCCAATCAAAGCACAGTGAATGCGCTTTTGGTAGGTCTATTCAA
CTATCTAGAATACCTCACACGCGACCTTCCACTCCCCCGTGTTGCCAACC
CCGGACAGGAGAAAGGCGCCCGAGTCGTCCTCTGCAGCCACCTGGGCCGC
CCCAAAGGCGTTACCGAGTCCTTGCGCATGGCGCCCGTGGCCACCCGCCT
CTCTGAGTTGCTGGGTTCCGAGGTGAAGTACGTGAAGGATTGCGTGGGAG
AGGAGGTTGAGCAGCAAGTGGAAGCCCTCTCTGCGGGCCAGGTCCTCCTG
CTCGAAAACGTTCGTTTCTACAAGGAGGAGGAGAAGAACGCGCCGGAGTT
CGCGGCTAAACTTGCGCGTTTGGCGGATGTGTATGTCAACGACGCCTTTG
GGACGGCTCACCGCGCGCATGCCTCCACGGAGGGCATTGCCAAGCTGGTG
AAGACGACGTGCGCGGGTTTTTTGATGGAGAAGGAGCTGTCCTACCTGGA
TGGGGCCGTGTCCAAGCCCACGCGGCCCTTTGCGGCGATTGTCGGGGGGT
CAAAGGTAAGAACGAGAGGCAAGCGATGGCGTCTCATCAGACGTTCGGAA
GGAGTGTGGTGCTACTCGTGGCGTGTCTGGGCGAATATTGAGTGCCGCCG
ACTCGTCTGCTCCGCGTTTCTTTCTCTCCGTGGGTCCCCTCGACGATGGG
TCGCAGACGCCAGTTATTGTGATGCCAATCTTGACTTGCGGGAAATGCAT
CTCGTTATAGCCCACTGCTGAATGTCTGGCAAGGAAACCCTCAAAAGTCT
GGCAAGCAAGATCGATCTCAAGAATCAACGTGTCTTCTGTCGAGTGGACT
TCAATGGTACGTCTTACTGGTCTGGAGTCATGAGGATCTACGTGCGGTCA
CTCCCAACCCTGACCGCTTCCCCACTTCCCCTCTCTCCTGTCACAGTTCC
CCTCGACAAAGAGGCGAAAGTCACGGACGATACGCGCATCCGCGCTGCCC
TCCCCACCATCAAGTTTCTCGTGGTACGTACTTCACCACAGTGTTGGCTC
TTCGGCCTCCATGTTATGGTCTCCAGCCGTAAAGGAATCTTGTGCCCTGC
CTGCGCCCGCCTGTTCAGCAGCTCTTCTGGTGTTTCCAATCAAAGCACAG
TGAATGCGCTTTTGGTAGGTCTATTCAACTATCTAGAATACCTCACACGC
GACCTTCCACTCCCCCGTGTTGCCAACCCCGGACAGGAGAAAGGCGCCCG
AGTCGTCCTCTGCAGCCACCTGGGCCGCCCCAAAGGCGTTACCGAGTCCT
TGCGCATGGCGCCCGTGGCCACCCGCCTCTCTGAGTTGCTGGGTTCCGAG
GTGAAGTACGTGAAGGATTGCGTGGGAGAGGAGGTTGAGCAGCAAGTGGA
AGCCCTCTCTGCGGGCCAGGTCCTCCTGCTCGAAAACGTTCGTTTCTACA
AGGAGGAGGAGAAGAACGCGCCGGAGTTCGCGGCTAAACTTGCGCGTTTG
GCGGATGTGTATGTCAACGACGCCTTTGGGACGGCTCACCGCGCGCATGC
CTCCACGGAGGGCATTGCCAAGCTGGTGAAGACGACGTGCGCGGGTTTTT
TGATGGAGAAGGAGCTGTCCTACCTGGATGGGGCCGTGTCCAAGCCCACG
CGGCCCTTTGCGGCGATTGTCGGGGGGTCAAAGGTAAGAACGAGAGGCAA
GCGATGGCGTCTCATCAGACGTTCGGAAGGAGTGTGGTGCTACTCGTGGC
GTGTCTGGGCGAATATTGAGTGCCGCCGACTCGTCTGCTCCGCGTTTCTT
TCTCTCCGTGGGTCCCCTCGACGATGGGTCGCAGACGCCAGTTATTGTGA
TGCCAATCTTGACTTGCGGGAAATGCATCTCGTTATAGCCCACTGCTGAA
TGTCTG back to top
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