Naga_100014g18, gene4382 (gene) Nannochloropsis gaditana

Overview
NameNaga_100014g18
Unique Namegene4382
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:872455..875221 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100014g18
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:872455..875221 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0006091generation of precursor metabolites and energy
GO:0009058biosynthetic process
GO:0005975carbohydrate metabolic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016301kinase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL147ngnoL147Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G01060NO06G01060Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4541rna4541-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna4540rna4540-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4541rna4541Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna4540rna4540Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4541

>rna4541-protein ID=rna4541-protein|Name=rna4541|organism=Nannochloropsis gaditana|type=polypeptide|length=375bp
MSGKETLKSLASKIDLKNQRVFCRVDFNGTSYWSGVMRIYVRSLPTLTAS
PLPLSPVTVPLDKEAKVTDDTRIRAALPTIKFLVVRTSPQCWLFGLHVMV
SSRKGILCPACARLFSSSSGVSNQSTVNALLVGLFNYLEYLTRDLPLPRV
ANPGQEKGARVVLCSHLGRPKGVTESLRMAPVATRLSELLGSEVKYVKDC
VGEEVEQQVEALSAGQVLLLENVRFYKEEEKNAPEFAAKLARLADVYVND
AFGTAHRAHASTEGIAKLVKTTCAGFLMEKELSYLDGAVSKPTRPFAAIV
GGSKVRTRGKRWRLIRRSEGVWCYSWRVWANIECRRLVCSAFLSLRGSPR
RWVADASYCDANLDLREMHLVIAHC
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protein sequence of rna4540

>rna4540-protein ID=rna4540-protein|Name=rna4540|organism=Nannochloropsis gaditana|type=polypeptide|length=433bp
MSGKETLKSLASKIDLKNQRVFCRVDFNGTSYWSGVMRIYVRSLPTLTAS
PLPLSPVTVPLDKEAKVTDDTRIRAALPTIKFLVEKGARVVLCSHLGRPK
GVTESLRMAPVATRLSELLGSEVKYVKDCVGEEVEQQVEALSAGQVLLLE
NVRFYKEEEKNAPEFAAKLARLADVYVNDAFGTAHRAHASTEGIAKLVKT
TCAGFLMEKELSYLDGAVSKPTRPFAAIVGGSKVSTKITVVETLINKVDK
LIIGGGMVFTFLKAQGHGVGSSLVEEDFLELAKKLESMAKEKGVKLILPT
DVVIADKFSADAQSKVVPATEIPDGWMGLDNGPETTKMIQAELADCKTII
WNGPMGVFEFEKFAAGTSAIAKTLAELTSKGATTIVGGGDSVAAVEQAGL
ADKLSHVSTGGGASLEMLEGRTLPGVAAIQDAQ
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Synonyms
Publications