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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100072g11.8020.mrna |
| Orig protein id | gnl|cribi|Naga_100072g11.8020 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:754066..754737 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4499 ID=rna4499|Name=rna4499|organism=Nannochloropsis gaditana|type=mRNA|length=4218bp
GGCGCATCAGGCCTTCGGGGCCGAGTTTTATTCCTTCGCCGGCCTCCAAT
TGCTCAACGACTTGCTCGGTTTCTCGGGCCCCATCTTGCTCAAATCGCTC
GTCACCTATGTCGAAGACTACCGTGCTGGGCTTACTACTATTCGGCACGG
CCTTGTGCTGCTCCTCGTCTTAGTCTTGTGCTACTGGGCGGCAGCGATCC
TGTCCACCCAGTACTCTCTGCGCATGGCGCGAGTCCAGCTCCACGTCAGA
ACAGGGCTGACCATGGCCATCTACCGACAAGTGCTCCGGTGCCGAGCGGC
ACAAATTGGTGGGAGCGCTGGAGGTGGCAATGGGCGGGAGGTTGGGGAAA
ATGAAGAAGGTAGAGGGGCGCGGGAAGGAGATGATGGGGGAGGAGTCCGT
CCACATTGCGCGAAGGGAGACACGGAAGGCTCCTCTGGAGAGGGCCGCAA
GCAAGGACAGCAGACTGCCAAAGCACCGACAAAGCTGGTACCCGCCCTGT
CAACGGGGGGGATTACAAACCTCATGACGGTGGACGTGCAGCGCATTCAG
GACGCGGCCTCGTCTTTCAACACGTTCTGGAGCCTGCCCATCCAGGTAGG
CTTTACGCTCTTCCTTCTCTACCGCGAGGTCTCCTACGCCTTTGTCGCCG
GTCTGGTGGTCCTGGCGCTCATGGTGCCGGTCAACGTAGCCCTTGCCTCC
GCCATCACCCGCGTGACCCGACGGCAAATGACCTACAAGGACGCCCGCGT
CCAGGCCTGCGACGACATGCTCCATGGGATCCGGACCTTGAAGCTGCTCG
CATGGGAGGACCACCTCGCGCGGCTGCTGGGCCGTCTGCGGGGCCAAGAG
GTACGCTATCTCGCCCAACGGAAGTACCTGGATGCTTGGTGTGTCTACTT
TTGGGCAGCGACGCCGGTCGTCACCTCGCTCGCTACCTTCGGCGCGGTGG
TGCTGAGAGAGCATTCCATCACACCGGCCTCCGTGTTCACCACCATCGCC
TTGCTGAACATGCTGATCTTTCCCATGAACGCCTTTCCATGGGTCATCAA
CGGTCTGATGGAAGCGAGGATATCACTGGGGCGGTTGCAAAGCTTCCTCC
TAGAAATACCGGAACTGCCAAGGTACCACGTGGTAATTGAGGAGGCAGGG
CCGCACGGAAAAGGGCGTTCGGGAAAATGTTATGCACCTTTGGCAAATGC
AGAAAGAGGGGTGCTAGCTATCGAGGCTAATGGATCTTTCGCCTGGGATG
TAAGCGATCATAGGGGCCCAAGTTGGAAAGAAGTAGCTGCGCCGGTGAAC
GAGGCTGGTCTAGACAAGCAGCAGCGATGCACATCGCTGAGCACCGATGA
GATATTTAGAACTGCGCCATTGCCTGTACGTGAGTTGGATATTGAGATGA
TGGAAGCACACGCCGAATTGAACTTAGATTCGTCCATAGATATTGGCCCC
AGGAGCTCAATCGATGAATCCGCTGACTTTGGCTCCTTGACTACTCCCTC
CTCTGTTTTCGAAATCCCTGATCTACGATTTTGTGTGTCCTGGGGAGAGA
TCGTGGGCATTTATGGAAAGATTGGTTCAGGTAAATCCACCCTCTTGGCG
GCCCTGTTGGGCGAAATATTCGCGAGCCCCGGCAGTCGTGTGATCCTTCG
TGCTCGTCGACGGGCGTATGCTGCACAAATACCCTGGTTGCAGCGTGGCA
GCGTCCGAGACAACATTGTGTTTGGGCTGCCTTATGATGGGGTCCGATTT
CAAGCCGTGTTGCAGGCCTGTGCCCTGCTTCCGGACTTGAAGACGCTGCC
TGACGGAGACCAGACTGAGATTGGAGAGCGCGGAGGGACTTTGAGCGGGG
GTCAGCGCTTGCGAGTGGCACTGGCTCGGGCACTCTACAGTAAAGCGGAT
TTGTATCTATTGGACGACCCCTTCAGCGGACTGGACGGTCAGACGGCTTG
GCATGTGGCCCGCGAGGCGGTGTATGGAATGATGCGACGAGAGGGGGCCA
CGGTGGTGATAGTCTCCCACGCGCTCCCTCTTTTGGGCAAGTGTGACTCG
GTGATCAGGATGCAGGCGGGGCGAATGGTGGAGAGACTCCGGTTCAGAGC
AAAGCCGGACAAAAGTGTAGCACTGACAGGAGATGCTACAGGTAATGGCG
GCTTTGAAATCCAGCCCGGTGCCCTTACCACGCACCTTTCTGATACACCA
AAGCCACATTTATTAACATTGCCCGCCTCCAAGGAAAATTTGTCATTAGT
GGATACAGCCGGTGCAGTCGACGCGCCGATGGAATTAGCGCAGGAAGAGA
ATCGAGAGATGGGCCACGTGAAATACAGCGTGCTGAAGTACTACAGGAGA
GGTATGGGTCACGGTTTGACTGCAGGACTCCTCATCTGTTTATCTGGCAT
GCAACTCTCGGCCAACGCTTTCACTTACTGGCTGAGTCTATGGTCGAGCC
ATACCAGTGATTACACACCTCAAAAATTTTTGGTCGTGTCTGGAACAATT
GCGGTCATCAATAGTCTGTTCACCTTCCTTCGTTCATTCCTTTTCGCCTA
CGGGGGCCTCCGTGCGGCCCGCCGACTGCATGATCAGCTTCTTCGAGCAG
TCCTTGGCGCCCCCATGGCGTTTTTCGAAGCCCATCCTGTGGGTCGAGTC
TTGAATCGTTTCGCACAGGACACGTATATCATCGACGATTCCCTTCCTTT
CATGCTGAACATTTTTCTTGCACAAGGTGTGGGGCTCATTGGCACAGCAA
TTGTTCTTCTCTTCGCCTCTCCGTGGAGTGTGGCAGTCTTGGTGCTAGTT
GCTATCGTTTATCAACGCCTTCAAACCTTCTACAGAGCGTCCTCTCGGGA
GCTCAAGCGTCTGGATGCCGTTTCAAGGTCCCCTTTGCTCTCCCACTTCA
GCGAAACAATAAGTGGGGCTTCAACAGTGCGCGCTTTTGGTGCCACGGAC
GCCTTCATAGGCCGAAGTATCGAGATGATGGATGCCAATCAACGGGTAGG
ATTTATAGGAAATGCTGCGTCCCAGTGGCTGGGCTTCAGGCTGCAAGTGT
TTGGCCTCTTGGTTGTGGCATCAGTGGCGGTCTGGGCAGTGGGATCATGT
GTGATCGATCACCCAGTATCAGCGGGACTGATTGGATTGTCGCTAAGTTA
CACATGGCCGCTTGTGGGTAATTTGAGTGGTCTTCTGAATGCGTATACAG
AGACAGAAAAAGAAATGGTAGCAGTGGAACGGGTGCATGAGTATACGACC
GAGCCCCCTGAGCCCGACGTCGTTTTCAGTACAATGGTCGGCAAGGGGTG
CGAAGAGAATGCTGGAGTCGCAGTGGAGGTTACCCCCTCATGGCCTCAAA
ACGGCAGACTTGCTGTCCACGACCTCACGCTTCGCTACCACCCGACGTGG
CCACCAGCTTTGGACCGGCTTAATTTTACAATCGAACCGGGCGAGAAGGT
CGGATTGTGTGGTCGAACTGGAAGTGGAAAGACTACTCTATTGTCTTCAA
TATTTCGACTCGTTCCCTGGGAATGTGGCACAATTATAATCGATGGATTG
TCCGTTCAAAGTGTTCCTCTAAAGCGCCTTCGTTCCTCTATGGCCATTAT
TCCGCAATCGCCTGCTCTTTTTACTGGTACCGTCCGCAGTAATTTGGATC
CGAAGGAAGAGTATTCTGACGCCGAGCTTTGCGCGGCTATGCAGGCTTGT
CATCTTGAAGACTTCCTTTTGGACACGATAAATGATGTCGATACTCCCAA
TCATCAGAAGGAAGCGAAATCTCTGTCTCCCCGATATATGACGCAATGTT
TGGCTGTGAACGTAGAAGAGAACGGAAGAAACTTCTCGGTCGGGCAAAGA
CAGCTTCTTTGCCTGTGTCGTGGCCTGCTTAAACGAACTAAAATTGTGTG
CGTGGATGAAGCAACGGCATCCTTAGATATGACCACAGACGCTCTGATGC
GTCGCACCTTGGCCAGAGCGTTCAAGCATGCCACTATGATCACCATCGCA
CATCGCATGTCCACGGTGCTGGATTTGTGCGACCGCGTCTTGGTGCTCTC
CGAGGGCAAAGTGGTGGAGGATGGGAATCCGCAAGAGTTGATCAGAGATC
CAAACAGCTGTCTTGCTCGACTGAGTGCAGAGGAGAAATTGGGAGTGAAG
CACCAGCAAGAACTACGCTAAAAATAATCACATAGAAAATCAAATCAAAT
GTAATCTGGCCTGATTTA back to topprotein sequence of rna4499 >rna4499-protein ID=rna4499-protein|Name=rna4499|organism=Nannochloropsis gaditana|type=polypeptide|length=173bp
MGNKFGEHSIRHGCTEMLHPTSVRTLAKRRRKVAAPLPRFSQRINLVSKT
VLLARWQTVILEAHRVRGNFFNFSVLGRARLESWAGFWGYCMATIMRDFS
LRIFAHLVRLAVRFHANLLVVEPEDPEASFDERMPNDICRPLARTIRQIS
GRALIGPVAQATGLEPLRWEPND back to topmRNA from alignment at CM002463.1:754066..754737- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4499 ID=rna4499|Name=rna4499|organism=Nannochloropsis gaditana|type=mRNA|length=672bp|location=Sequence derived from alignment at CM002463.1:754066..754737- (Nannochloropsis gaditana)
ATGGGCAATAAATTCGGAGAGCATAGTATAAGACATGGTTGTACAGAGAT
GCTGCATCCCACTAGTGTTAGGACACTCGCAAAGCGTCGGAGAAAAGTAG
CCGCTCCATTGCCTCGATTCAGCCAGCGGATAAATCTGGTTTCTAAAACC
GTGCTGTTAGCACGATGGCAAACTGTAATATTGGAGGCTCACAGGGTTAG
GGGTAATTTTTTCAACTTTTCTGTCCGTCCATGTCACTCACCCTTCATCG
GCCACGAGGGCACTCCTGAGGGGGACGGTCTTCCAGCACTCTTCCACCGG
GCTCCCGAGGGGCTCGGAATAGGAAGGAAGTGCATATGTCACGTTTCCGT
GACTGGACCTCTTCTCGTCACCAAAGTTGGAAGGGCGCGACTTGAAAGTT
GGGCAGGTTTCTGGGGGTATTGCATGGCAACTATTATGAGAGACTTTTCT
CTACGCATTTTTGCACACCTTGTGCGACTCGCTGTGAGGTTTCATGCCAA
TTTGCTTGTCGTGGAGCCGGAGGACCCGGAGGCATCGTTCGATGAGCGGA
TGCCAAATGATATCTGCCGACCCCTGGCACGAACTATCAGGCAAATATCG
GGGAGGGCGTTGATTGGGCCTGTCGCTCAAGCTACGGGGCTAGAGCCCTT
ACGGTGGGAACCCAACGATTGA back to topCoding sequence (CDS) from alignment at CM002463.1:754066..754737- >rna4499 ID=rna4499|Name=rna4499|organism=Nannochloropsis gaditana|type=CDS|length=1044bp|location=Sequence derived from alignment at CM002463.1:754066..754737- (Nannochloropsis gaditana)
TTGGAAGGGCGCGACTTGAAAGTTGGGCAGGTTTCTGGGGGTATTGCATG
GCAACTATTATGAGAGACTTTTCTCTACGCATTTTTGCACACCTTGTGCG
ACTCGCTGTGAGGTTTCATGCCAATTTGCTTGTCGTGGAGCCGGAGGACC
CGGAGGCATCGTTCGATGAGCGGATGCCAAATGATATCTGCCGACCCCTG
GCACGAACTATCAGGCAAATATCGGGGAGGGCGTTGATTGGGCCTGTCGC
TCAAGCTACGGGGCTAGAGCCCTTACGGTGGGAACCCAACGATTGAATGG
GCAATAAATTCGGAGAGCATAGTATAAGACATGGTTGTACAGAGATGCTG
CATCCCACTAGTGTTAGGACACTCGCAAAGCGTCGGAGAAAAGTAGCCGC
TCCATTGCCTCGATTCAGCCAGCGGATAAATCTGGTTTCTAAAACCGTGC
TGTTAGCACGATGGCAAACTGTAATATTGGAGGCTCACAGGGTTAGGGGT
AATTTTTTCAACTTTTCTGTCCTTGGAAGGGCGCGACTTGAAAGTTGGGC
AGGTTTCTGGGGGTATTGCATGGCAACTATTATGAGAGACTTTTCTCTAC
GCATTTTTGCACACCTTGTGCGACTCGCTGTGAGGTTTCATGCCAATTTG
CTTGTCGTGGAGCCGGAGGACCCGGAGGCATCGTTCGATGAGCGGATGCC
AAATGATATCTGCCGACCCCTGGCACGAACTATCAGGCAAATATCGGGGA
GGGCGTTGATTGGGCCTGTCGCTCAAGCTACGGGGCTAGAGCCCTTACGG
TGGGAACCCAACGATTGAATGGGCAATAAATTCGGAGAGCATAGTATAAG
ACATGGTTGTACAGAGATGCTGCATCCCACTAGTGTTAGGACACTCGCAA
AGCGTCGGAGAAAAGTAGCCGCTCCATTGCCTCGATTCAGCCAGCGGATA
AATCTGGTTTCTAAAACCGTGCTGTTAGCACGATGGCAAACTGTAATATT
GGAGGCTCACAGGGTTAGGGGTAATTTTTTCAACTTTTCTGTCC back to top
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