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Properties
| Property Name | Value |
|---|
| Product | TB2/DP1/HVA22-related protein |
| Orig transcript id | gnl|cribi|Naga_100025g14.7499.mrna |
| Orig protein id | gnl|cribi|Naga_100025g14.7499 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:679361..680172 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4475 ID=rna4475|Name=rna4475|organism=Nannochloropsis gaditana|type=mRNA|length=1614bp
TTGGAAAAATACGTACCACCGCCGGGAGCACAGCGCGACTTGGCCAAATA
CAGCGTGCATGTCCATGATGGCGCATAGATTTTCATTCATTTTGGTTTTC
CTGGCATGTTATCTCTCATTTAGGCCACGGGTGGGCAGGGCCCGTTCAGC
TTGCCTCTGATGCTTGCGGCTTTTCCAGGAGCGATGCTCGGAGCCCTTAC
AATTTCGATTTTGCTCCTAAGCAGCGTGGCGGACGCCTTTCGTCTTGCCA
GCCCTTTCACAGTCAAAGCAGCCAGAGTCGTCACAGCCGCAGACATGGAC
AGGTGGCGGAGTCCACTTCTCCACCGAGTAAGGAGCAGTCGCGGCAACAG
TGAAGCTTCTTCCCCGAAGGAATTTTTCCGACTCGCCCGTGGGAAAATGG
AGTTTGGGACAGTCGATGAAGTGGAACTTCTGCTATGGGACGAGCCTGCC
CTCATCCGTCGGTACCTCACGGAATCACCCGACCGGGTCCTCCTGGCCAC
CTGGGACGCAGAACTAGTGGATCGCCGGGCCAGGGATGTATTTCGTCTCA
CCACGAAACCCATGTCCTTCGTGCACTTGAGTCTACAACCCTCCATCGAC
GTACGCCTCACGGCCATACCACCGGAAGCGGGAAGAGAGGAGGGCGCGCC
GGAGAGCGGGGGACATCTTCTGTCGGTGGAGTCCTTAGGGCACTCCATGA
ACGGATTAGAGCAGATTCTCGGACAACGCTTCGCCGAATCTCTACGGATC
GATGTCACGGGAAAATTGAGGGCCCACGTCCCTCCCGCCCGCCCTGGGGA
TTCGAAAGGTCGAGGACCCGTGCGCTTGGTGGGGGAGGTGGTGTTCGTGA
CCTCGGGTCAGCTCCCGTCCCTCCTGAGCCTGACCCCCCGCCCCGTCTTG
GAAAGCGCGGCTATCGCGATCAATCGGCGCATCATGAGCTATGCCAAAGG
AAAATTCGTGAAAAATCTGGCCAAGGACTTCAATCGGTGGTCGGCTTCTG
CTTTGGAGGCGGGGTAGGGGGGAGCGGCCTTACAAGGTCCTGGAAGTTCT
CGGGAGGGAAAACAAAGCACTACATTTAGTAGCGAGTCCTTTGCAAATAG
TCGTGATGATAACGTTTCCTTCTTGGGACGGCTCTGTGGGTGGGAAGATA
AGCTGGCGGCGTGCATGACCTGGAGGGGTATAGTGGGGATAGGCCCATGC
AGCGTCCTCTGACTCCACGGCCTTGGGGGAGGCCAAGAGGACGTTTGAGG
ACTGGGTGCATCGACAAACGCCGCGTTTGAATCGTCGTTAATGAAAGCCC
ACACAGGTTGTGTAGCTTGACATACTGTACATAGATAGGGCAATAAACGC
TCCAAAACGATGGAGAGGCTACAGTCGGGAGACGCGCTACGATAGGAGCA
CGCCTGTCCGTTCGAAAAGACACGTGGGAATTTTTACGAAAGTCCAGTAA
TGAATAGGAAGGATGGCCTTGAGCACCTGGAAAATACCCAAAGCAATGAA
TTTGAAGCATTTGCACCCCCTCGGTATTCAGTGATGTTGACGTTTCTGTC
TTCTCCTTGTCGTGTTGTCAGGAAAGAAATGCGTCGATCACAGAGGTACC
GCTCTACTCCCACG back to topprotein sequence of rna4475 >rna4475-protein ID=rna4475-protein|Name=rna4475|organism=Nannochloropsis gaditana|type=polypeptide|length=158bp
MSSVEFPGPRASIPESSAAAHADVPDVFDESQSAEHWSLYWLISSIITFL
LEKPVDAVISWVPLYRWMKLALFLWLALPRFQGAARLYYVLLQPLLITYE
PEISNARDSVWKMTKKSSHSAAVAVLSFLTTTVTASEGGSSQHWGRGPAT
PQGGTEAP back to topmRNA from alignment at CM002463.1:679361..680172+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4475 ID=rna4475|Name=rna4475|organism=Nannochloropsis gaditana|type=mRNA|length=812bp|location=Sequence derived from alignment at CM002463.1:679361..680172+ (Nannochloropsis gaditana)
ATGTCTTCGGTAGGTAAAGGAGTTGCCCGCCTcgatttttcttcctcaga
TTTTCATGGCAAACCTGATCGTGGGCACCTGGCAAAAATTCCTTCACCTG
TCGGTCCCACTTGCTCATCATCAAACAGGGTCGGTATACTGTATGTATAC
CCCATAATTGCCTCATGTCGAACGGTGTCAGAATTCCCGGGGCCACGGGC
CAGCATTCCCGAGTCAAGCGCCGCGGCCCATGCCGACGTGCCCGACGTAT
TCGACGAGTCCCAGAGCGCCGAGCATTGGTCTCTCTACTGGCTCATATCC
TCCATCATTACCTTTCTACTTGAGAAGCCTGTGGACGCGGTCATATCTTG
GGTTCCTCTCTACCGGTGGATGAAATTGGCATTGTTCCTGTGGTTGGCGC
TGCCCAGATTTCAAGGTGCTGCTCGGCTGTACTACGTGCTCCTACAACCC
CTGCTGATAACGTATGAACCTGAAATCAGCAATGCCAGGGATAGTGTCTG
GAAAATGACCAAAAAAAGCAGCCACAGTGCAGCAGTTGccgtcctgtcct
tcctGACAACCACCGTGACGGCCTCCGAGGTGACGACACGACGCAACCGG
GAGGGAatggcggggctggcggaTACCGGTGGCCTGGAGGCCGCACGCTT
GCTAGCCTTGCAGGCAGCCCGATCCGCGCTTGCGAATTTTTGGGCTTCCG
CGGACGTCAACGGCGCAGGCGGCCCTCTGCGAGCGCATGCCGCCAGGGTG
GAAGCAGCCAACActggggccgggggcctGCGACGCcgcaaggagggacg
gaagcgcCGTAG back to topCoding sequence (CDS) from alignment at CM002463.1:679361..680172+ >rna4475 ID=rna4475|Name=rna4475|organism=Nannochloropsis gaditana|type=CDS|length=1431bp|location=Sequence derived from alignment at CM002463.1:679361..680172+ (Nannochloropsis gaditana)
ATGTCTTCGGTAGAATTCCCGGGGCCACGGGCCAGCATTCCCGAGTCAAG
CGCCGCGGCCCATGCCGACGTGCCCGACGTATTCGACGAGTCCCAGAGCG
CCGAGCATTGGTCTCTCTACTGGCTCATATCCTCCATCATTACCTTTCTA
CTTGAGAAGCCTGTGGACGCGGTCATATCTTGGGTTCCTCTCTACCGGTG
GATGAAATTGGCATTGTTCCTGTGGTTGGCGCTGCCCAGATTTCAAGGTG
CTGCTCGGCTGTACTACGTGCTCCTACAACCCCTGCTGATAACGTATGAA
CCTGAAATCAGCAATGCCAGGGATAGTGTCTGGAAAATGACCAAAAAAAG
CAGCCACAGTGCAGCAGTTGccgtcctgtccttcctGACAACCACCGTGA
CGGCCTCCGAGGGTGGAAGCAGCCAACActggggccgggggcctGCGACG
CcgcaaggagggacggaagcgcCGTAGATGTCTTCGGTAGAATTCCCGGG
GCCACGGGCCAGCATTCCCGAGTCAAGCGCCGCGGCCCATGCCGACGTGC
CCGACGTATTCGACGAGTCCCAGAGCGCCGAGCATTGGTCTCTCTACTGG
CTCATATCCTCCATCATTACCTTTCTACTTGAGAAGCCTGTGGACGCGGT
CATATCTTGGGTTCCTCTCTACCGGTGGATGAAATTGGCATTGTTCCTGT
GGTTGGCGCTGCCCAGATTTCAAGGTGCTGCTCGGCTGTACTACGTGCTC
CTACAACCCCTGCTGATAACGTATGAACCTGAAATCAGCAATGCCAGGGA
TAGTGTCTGGAAAATGACCAAAAAAAGCAGCCACAGTGCAGCAGTTGccg
tcctgtccttcctGACAACCACCGTGACGGCCTCCGAGGGTGGAAGCAGC
CAACActggggccgggggcctGCGACGCcgcaaggagggacggaagcgcC
GTAGATGTCTTCGGTAGAATTCCCGGGGCCACGGGCCAGCATTCCCGAGT
CAAGCGCCGCGGCCCATGCCGACGTGCCCGACGTATTCGACGAGTCCCAG
AGCGCCGAGCATTGGTCTCTCTACTGGCTCATATCCTCCATCATTACCTT
TCTACTTGAGAAGCCTGTGGACGCGGTCATATCTTGGGTTCCTCTCTACC
GGTGGATGAAATTGGCATTGTTCCTGTGGTTGGCGCTGCCCAGATTTCAA
GGTGCTGCTCGGCTGTACTACGTGCTCCTACAACCCCTGCTGATAACGTA
TGAACCTGAAATCAGCAATGCCAGGGATAGTGTCTGGAAAATGACCAAAA
AAAGCAGCCACAGTGCAGCAGTTGccgtcctgtccttcctGACAACCACC
GTGACGGCCTCCGAGGGTGGAAGCAGCCAACActggggccgggggcctGC
GACGCcgcaaggagggacggaagcgcCGTAG back to top
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