EWM26208.1, cds4464 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26208.1 vs. NCBI_GenBank
Match: gi|585108207|gb|EWM26208.1| (TB2/DP1/HVA22-related protein [Nannochloropsis gaditana]) HSP 1 Score: 318.161 bits (814), Expect = 5.948e-110 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0
Query: 1 MSSVEFPGPRASIPESSAAAHADVPDVFDESQSAEHWSLYWLISSIITFLLEKPVDAVISWVPLYRWMKLALFLWLALPRFQGAARLYYVLLQPLLITYEPEISNARDSVWKMTKKSSHSAAVAVLSFLTTTVTASEGGSSQHWGRGPATPQGGTEAP 158
MSSVEFPGPRASIPESSAAAHADVPDVFDESQSAEHWSLYWLISSIITFLLEKPVDAVISWVPLYRWMKLALFLWLALPRFQGAARLYYVLLQPLLITYEPEISNARDSVWKMTKKSSHSAAVAVLSFLTTTVTASEGGSSQHWGRGPATPQGGTEAP
Sbjct: 1 MSSVEFPGPRASIPESSAAAHADVPDVFDESQSAEHWSLYWLISSIITFLLEKPVDAVISWVPLYRWMKLALFLWLALPRFQGAARLYYVLLQPLLITYEPEISNARDSVWKMTKKSSHSAAVAVLSFLTTTVTASEGGSSQHWGRGPATPQGGTEAP 158
BLAST of EWM26208.1 vs. NCBI_GenBank
Match: gi|604298011|gb|EYU18099.1| (hypothetical protein MIMGU_mgv1a019061mg, partial [Erythranthe guttata]) HSP 1 Score: 71.633 bits (174), Expect = 2.843e-12 Identity = 46/127 (36.22%), Postives = 65/127 (51.18%), Query Frame = 0
Query: 37 WSLYWLISSIITFLLEKPVDAVISWVPLYRWMKLALFLWLALPRFQGAARLYYVLLQPLLITYEPEISNA----RDSVWKMTKKSSHSA----AVAVLSFLTTTVTA--------SEGGSSQHWGRG 147
W YW+I ++IT +LEK D ISW+P+Y MKLALF++L PR QG +Y LL+P + +E +I + RD W + H+ + VL FL + SE +QH G G
Sbjct: 40 WCQYWIIVAVIT-VLEKIGDVFISWLPMYGEMKLALFIYLWYPRTQGTGYVYDTLLRPYVSRHETDIDRSLIEFRDRAWNLAIYYWHNCTELGSTKVLQFLQFVTSQSARVTHPPSENPVNQHTGGG 165
BLAST of EWM26208.1 vs. NCBI_GenBank
Match: gi|848931214|ref|XP_012828691.1| (PREDICTED: putative HVA22-like protein g [Erythranthe guttata]) HSP 1 Score: 72.0182 bits (175), Expect = 3.291e-12 Identity = 45/127 (35.43%), Postives = 64/127 (50.39%), Query Frame = 0
Query: 37 WSLYWLISSIITFLLEKPVDAVISWVPLYRWMKLALFLWLALPRFQGAARLYYVLLQPLLITYEPEISNA----RDSVWKMT----KKSSHSAAVAVLSFLTTTVTA--------SEGGSSQHWGRG 147
W YW+I ++IT +LEK D ISW+P+Y MKLALF++L PR QG +Y LL+P + +E +I + RD W + + + VL FL + SE +QH G G
Sbjct: 40 WCQYWIIVAVIT-VLEKIGDVFISWLPMYGEMKLALFIYLWYPRTQGTGYVYDTLLRPYVSRHETDIDRSLIEFRDRAWNLAIYYWHNCTELGSTKVLQFLQFVTSQSARVTHPPSENPVNQHTGGG 165
BLAST of EWM26208.1 vs. NCBI_GenBank
Match: gi|1147614725|ref|XP_020111383.1| (putative HVA22-like protein g [Ananas comosus]) HSP 1 Score: 69.707 bits (169), Expect = 9.046e-12 Identity = 32/76 (42.11%), Postives = 50/76 (65.79%), Query Frame = 0
Query: 30 ESQSAEHWSLYWLISSIITFLLEKPVDAVISWVPLYRWMKLALFLWLALPRFQGAARLYYVLLQPLLITYEPEISN 105
E Q W YW+I +I+T ++EK D V+SWVP+Y +KLA F++L P+ +G+ +Y L+PL++ YEP+I
Sbjct: 33 EIQQLRFWCQYWIIVAIVT-VIEKLADTVVSWVPMYGEVKLAFFVYLWYPKTKGSDLVYETFLRPLVMQYEPDIEQ 107
BLAST of EWM26208.1 vs. NCBI_GenBank
Match: gi|1035954511|gb|OAY76507.1| (HVA22-like protein i [Ananas comosus]) HSP 1 Score: 69.707 bits (169), Expect = 9.431e-12 Identity = 32/76 (42.11%), Postives = 50/76 (65.79%), Query Frame = 0
Query: 30 ESQSAEHWSLYWLISSIITFLLEKPVDAVISWVPLYRWMKLALFLWLALPRFQGAARLYYVLLQPLLITYEPEISN 105
E Q W YW+I +I+T ++EK D V+SWVP+Y +KLA F++L P+ +G+ +Y L+PL++ YEP+I
Sbjct: 33 EIQQLRFWCQYWIIVAIVT-VIEKLADTVVSWVPMYGEVKLAFFVYLWYPKTKGSDLVYETFLRPLVMQYEPDIEQ 107
BLAST of EWM26208.1 vs. NCBI_GenBank
Match: gi|747092935|ref|XP_011094253.1| (putative HVA22-like protein g [Sesamum indicum]) HSP 1 Score: 67.3958 bits (163), Expect = 1.584e-10 Identity = 37/111 (33.33%), Postives = 59/111 (53.15%), Query Frame = 0
Query: 37 WSLYWLISSIITFLLEKPVDAVISWVPLYRWMKLALFLWLALPRFQGAARLYYVLLQPLLITYEPEISNA----RDSVWKMT----KKSSHSAAVAVLSFLTTTVTASEGG 139
W YW+I ++IT +LEK D ISW+P+Y MKLALF++L P+ +G +Y LL+P + +E +I + R+ W + + + +L FL + S G
Sbjct: 40 WCQYWIIVAVIT-ILEKIGDVFISWLPMYGEMKLALFIYLWYPKTKGTGYVYETLLRPYVSKHETDIDQSLIEFRERAWNLAVYYWHNCTELGSTKILQFLQFVTSQSARG 149
BLAST of EWM26208.1 vs. NCBI_GenBank
Match: gi|299472644|emb|CBN78296.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 67.3958 bits (163), Expect = 3.225e-10 Identity = 34/99 (34.34%), Postives = 53/99 (53.54%), Query Frame = 0
Query: 36 HWSLYWLISSIITFLLEKPVDAVISWVPLYRWMKLALFLWLALPRFQGAARLYYVLLQPLLITYEPEISNARDSVWKMTKKSSHSAAVAVLSFLTTTVT 134
W YW++ S+ L+E VD +SWVP Y K+ L +WLA+PR+QGA+++Y LL P L YE I + + + + S + + + VT
Sbjct: 38 QWMTYWVVMSVFA-LVEVFVDFFVSWVPFYYEAKIVLIVWLAMPRYQGASQIYRRLLHPYLDKYEDNIDSGLEEMRAGATRRIQSLGASAATEIAKAVT 135
BLAST of EWM26208.1 vs. NCBI_GenBank
Match: gi|971510296|dbj|GAQ87912.1| (HAV22-like protein [Klebsormidium nitens]) HSP 1 Score: 63.929 bits (154), Expect = 9.426e-10 Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 0
Query: 32 QSAEHWSLYWLISSIITFLLEKPVDAVISWVPLYRWMKLALFLWLALPRFQGAARLYYVLLQPLLITYEPEIS 104
+ E+W YW+I S+++F E +I+W+PLY +KLAL LWL +P+F GAA +Y + P L Y ++
Sbjct: 42 EDDENWLTYWVIYSLLSFF-EAVAAPIIAWIPLYNQLKLALILWLVMPQFNGAAYMYRQFIDPALREYGDKLG 113
BLAST of EWM26208.1 vs. NCBI_GenBank
Match: gi|527183522|gb|EPS57872.1| (hypothetical protein M569_16945, partial [Genlisea aurea]) HSP 1 Score: 62.3882 bits (150), Expect = 9.838e-10 Identity = 33/77 (42.86%), Postives = 48/77 (62.34%), Query Frame = 0
Query: 30 ESQSAEHWSLYWLISSIITFLLEKPVDAVISWVPLYRWMKLALFLWLALPRFQGAARLYYVLLQPLLITYEPEISNA 106
E+ W YW+ ++IT +LEK DA ISWVPLY MKLAL+++L PR +G +Y LL+P ++ +E I +
Sbjct: 33 ENDELRFWCQYWITVAVIT-VLEKIGDAFISWVPLYGEMKLALYIYLWYPRSRGTGLVYDSLLRPCVLRHETNIDRS 108
BLAST of EWM26208.1 vs. NCBI_GenBank
Match: gi|147789755|emb|CAN67411.1| (hypothetical protein VITISV_025622 [Vitis vinifera]) HSP 1 Score: 65.0846 bits (157), Expect = 1.036e-9 Identity = 42/141 (29.79%), Postives = 68/141 (48.23%), Query Frame = 0
Query: 30 ESQSAEHWSLYWLISSIITFLLEKPVDAVISWVPLYRWMKLALFLWLALPRFQGAARLYYVLLQPLLITYEPEISNA----RDSVWKM-------TKKSSHSAAVAVLSFL--TTTVTASEGGSSQHWGRGPATPQGGTEA 157
E + W YW+I +++T + E+ D ISW+P+Y MKLA ++L P+ +G +Y VLL+P + +E +I R VW + K + V +L FL + S GGS + G +T Q ++
Sbjct: 52 EIEELRFWCQYWIIVAMLT-VTERFADIFISWLPMYGEMKLAFIIYLWYPKTKGTGYVYEVLLRPYVAKHETDIDRKLLELRARVWDLAIFYWQHCAKFGQTTFVQMLQFLAAQSARMPSHGGSEKEVEEGKSTRQDSKKS 191 The following BLAST results are available for this feature:
BLAST of EWM26208.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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