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Properties
| Property Name | Value |
| Product | putative atp-dependent rna helicase ddx31 |
| Orig transcript id | gnl|cribi|Naga_100003g34.1867.mrna |
| Orig protein id | gnl|cribi|Naga_100003g34.1867 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| CM002455.1 | supercontig | CM002455.1:1113976..1116921 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna447 ID=rna447|Name=rna447|organism=Nannochloropsis gaditana|type=mRNA|length=3046bp CCAACTCCACATGATACTTTATGCCCGCTTCATCCCGCGCTTTCCCACCC CTTGCACCGTCCACAGCTGTACAATGAAGAAAAAAGCAGCATCGCGTGAC CAGGGGCGATTGGGACGTGCAGTGCCCGCGAAAAAAAGCAGTCTAGTGAG GCGGAAGGGGCCTGGACCCGGTGGCCCCGGAAGTGCCACTCCCATGCCTG AGCAGCTCCCGATTGAGAATGACGAAGATGACACCATGGAAATACACGAG GAAGATCGTGCGTTCGTTGAGGAGCACTCTAGTTTTGCTGCTAGCTTTCT TGACGCTGATCCTCGGAGTCCCACCCCCGCGGGGTCGGCCGGAAAAAGCA AGCGAGCGCATACCGCCCCTGAGGACAACAATGGCGGCGTTGAGGTGCCC ATCGAACAGAAGTCCATGCGGCGTAAAGCATCGACATTAGGATGGAATAC GGCGCGCGGCATTGGGCACAGGGTGGTGAAAGAGCGACTACCCACCAAGA CAATCGATGGCAAGCTTCACTTCCGTCTAGAGGAGGTGGAGGAAATAGTC GAAGACACGCAGAAAGTAAATATTGTTGTTTCTGCAAGAAAGAGTAAGGA AAAAAAAGATAACAGAGGGGGAGAAGTGGAACAAGGGGAGGAGAAAAAGG AGGAGGAGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG GAGGAGGAGGAGGATGTCGAAGATGACATGAACGTTGCAATGCATTCCGA AACCTCGGACCCAGAAGTCTTGGGTGACAGTAGACCGAAGAACGGACGAG AAGCTAAAAATCGTAGTGGCAGCAGGGTAGTGTCGGGACAAATTGCAGCG GAGGCTGAAAGTCTGTCCGTCGAGGCATTCGGAGGGGATGTCCGAGCGAT GCGACGTGCCCGACTAGAGTTGAAAAAAACAGAGATTGCCACCTTGTGCG AGGCCATCTTGGAAAACCCCGAGGGAGGGCTCTTAGGCCGGTCCGCCGGG GGCGGATGGAGGGGCAGGGGCAGCCGAATGGGGGCTTTGCTCGGCGCTCT GGAGGATCAGGACAAGCAAGTCCAAGTCTGGGCGATGGCCTCACTGGTGG CGGTCTTCAGAGACCTGGCCCCCGCCTACCGGATCCGCCTGCCCACGGAG AAAGAGTTGCAGGTGAAGGCGTCGAAGGAAGTCAAGCGCACGCAGGAGTA CGAGCGGGTCTTGCTTGCCAGCTACCAAGCCTACCTCAAGTATTTGGAGC GGACGAGTCACGCAGGCCGCGCGTCGCCCTCTGGAAAGCCCCAGGTGTCC CCAGCGGGGAGGGAGGTCCGTCGGAGCGTGGCAGCCAAGTGTCTGTGCGA GCTTTTGACGGCGCTGTCTCACTTCAACTTCACGACGAGCGTGCTGACCG CCGTCATCCGCCTCGGCATGGGGCCCGATCCTCTTACCCGGACGATGGCA GGGGCGGCGGTGCGGCGCCTTTTGGAACGCGACCAGCAGGGAGACGTGTC TCTGTCCGCGACTAAGTTGATATGTAAGGAGATGCAACATCGACGGTTGC AGGCGCCGGAAGACATGCTGCGGGCCCTGCATGCGCTTAAACTGGTGGTG AAGGAAGACGAGGCCGTGGAAGTGCTACGAAAGGCGCGCGTGCATGCAAC GAAGCGGAAGAGCCAGCAGCTGGAGGAGAAGGAGGAGGACGGAGAGAGTG AAGTGCGAACGGGGTTGAGGGAGGCGGAGGCGCGCGCAGACCCGGAATTG CGGGCACGGTGCCAGTCCGAGTCCTTGCAGGAGGTTACAATTTTGTACTT TCGCGTGCTGAAACAGGCCAGGAAGCCGACCTTGCTGCCCGCAGCGCTGG AGGGGTTGAGTCGCGTAGCTCATCTCATAAATTTGGACACCGTGGTGGAC GTCTTGGAGGTGTTGAAAGACATGCTGGATCCGACCCGAAATTTGCCCCT GGGAGCGAGCCTGCACGCGGTACTCACGGCCCTACGCACGTTGCAAGGTC CGGGTCGAGAGCTCAGGGTCGACGATAAAGCCTTCTTGACTTTTTTGTAC CAGCTGTTGGGCCGCGTCGGGATGGGCCTTGCCGCCGACAGCCACCAGGA CGAGAAGAGGACTGATGCCCGTTCGGGCGTCACCATCTTCCCGCTGCTTG TTACGTGCCTACGGAAAGCCCTCTTGGAACGGCGAGAATTTTCTCTGGCG CGTGTTGCTGCCTTTTACAAGCGCCTTCTGGGCCTCGCTTTGCAACTCAC CTCCCCGCAGGAGTCACAGGTCGTGCTGGGGATCGTCAAGGAGCTACCGA CTCGCTACCCGGGCCTGGAACAAATGCTCGACGGAGAGACGGACCGGGTT GCGATGGGCGTGTATCGGCCTGATGCCGTAGAGCCGGAAATGAGCAATCC GCTGGCTTCGGGTGCCTGGGAATTGTCGCTTCTCAAAGTTCATCATTTTC ACGCGGGAGTGCGGAGGGCAGCAACAGAAGCGATCACGGCAGCAACGGCC GCGGCAGCCTCGACGCAGACTGCCACGCCATGGTCGTCCTCGTCATTTAG AGTTCGCGATTATTTTAACAAAGCTGGCAAAGGTTTGGAGAAAGAGGTGG CGATGGATGATCACTGGGACTTCTTGAAGCTCGGCTTCGGGGGAATGTTT ACTCAACTGCCGCGGCTTAACCCGTTGCATGCCATGATACGTCGAGCTGC GAGAGAAAAGCGAGGGCAGCGCACCAGGCTTTACTTCATTGAGCGATACG GCAATGTAGGGGCAAGTGAGGGAGAAGGGAGGGATTACAAGTCGCAATTT TGGGGAGAAAGTACGCATTCGAGACAATCTCTGAACGAAGATTTGAAACG CACTGAAAACGTCTCTTTTCAAAAGTACTTCCGCGACACTCGGGCGCACA AACGTAAGCTATCGTTGTGTCGGGAGTTACAACGCTCACGGGCAATTTTG AAGATGTATGCGTCTCGCCATTCCCAAGGGAAGCAAGCTGCCTTAAATTG AGGCAAAAGTAAACAACGAAAAATCAAACATTTTTTACAAAAAAGC back to topprotein sequence of rna447 >rna447-protein ID=rna447-protein|Name=rna447|organism=Nannochloropsis gaditana|type=polypeptide|length=981bp MELNIVEIPKLNATRSQNGEKPLRFVKRHRFKAKRERQGDTKVGLGSLRI KEAPLVGPEPTASGQKPRSVKINKPQDLSSTALVLGKKRKLRGDLLSEQQ EHEVDGPLKRRTISHSMHPTSRTDVPVVEGHEGKEMKSRLTDSASTPVAL GRAPSSDSLVRVSENEEGKRTAHCRLGIVSTTSMPRPSKPSKDEDDKTAP TKTRPPTKASTSREAIDPSSRESSTAIDLGPGGSRCGSPFTPLCTGYSRK NPAPASAARLDEFHIKPSELDMVTAAVPTGRDKEGATASTSDPASARKRK ISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALL QSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPT RELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTP GRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGRE GGSSGQEEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDV DVAATPGGGEMGATDGEGGGQDGRPIGGKDDAVEGRKGENLPGDATPNAT SSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFLRVHAKSHKTVIFCSTC DSVDFHYALFETRLEGNERGADKIGKSSHTLPSEDAAEQPLLGSDMPVYR LHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPT ETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQ TLFEATPARFKGRFRGPEEVFCLDIQQQLERAVATAKEERGMNERKGNAS SPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPT SLKVGKEVMKISSQRQSASEHDQNGKSKHGGDDLRDTDSETVRKMATKNT QKAFQSPRKQSTGSKRRSRTAFSSVSEFSAG back to topmRNA from alignment at CM002455.1:1113976..1116921+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna447 ID=rna447|Name=rna447|organism=Nannochloropsis gaditana|type=mRNA|length=2946bp|location=Sequence derived from alignment at CM002455.1:1113976..1116921+ (Nannochloropsis gaditana) ATGGAGTTAAATATCGTTGAGATACCGAAGCTCAATGCTACTCGTAGCCA
AAACGGAGAAAAGCCTCTCCGCTTCGTAAAGCGGCATCGTTTTAAGGCCA
AGCGCGAGCGCCAGGGGGATACTAAAGTGGGTCTGGGCAGCTTGCGCATC
AAAGAAGCTCCGTTGGTTGGTCCCGAGCCCACAGCATCAGGCCAAAAACC
ACGTAGCGTGAAGATAAACAAGCCGCAAGACTTGTCGTCTACAGCTTTGG
TTCTTGGCAAAAAACGAAAACTAAGGGGAGACCTGCTGTCCGAGCAGCAG
GAACACGAGGTGGACGGTCCCCTCAAGCGGCGGACAATCTCCCACTCGAT
GCACCCAACATCTCGCACAGACGTCCCGGTGGTTGAAGGTCATGAAGGCA
AGGAAATGAAGAGTAGGCTTACAGATTCGGCCTCTACGCCTGTTGCCCTG
GGACGTGCGCCGTCCTCGGATTCCTTGGTGAGGGTCTCCGAGAACGAGGA
AGGCAAGCGGACTGCGCATTGTCGTCTTGGAATTGTGTCTACGACATCGA
TGCCGAGGCCGTCAAAACCCTCAAAAGATGAAGATGACAAGACTGCCCCA
ACCAAAACGCGCCCACCTACAAAGGCCAGCACCAGTCGCGAGGCGATCGA
TCCCTCTTCACGCGAATCGAGTACGGCCATCGACCTGGGACCTGGGGGTT
CAAGATGTGGTTCGCCATTCACACCACTGTGCACAGGATATAGTCGTAAA
AACCCTGCACCTGCCTCAGCTGCCCGCCTGGATGAGTTCCACATCAAACC
CTCCGAGCTCGACATGGTCACTGCCGCAGTGCCTACCGGCAGAGATAAAG
AAGGCGCTACAGCTTCTACCTCCGACCCAGCGTCTGccaggaagagaaaa
ataaGCAAACACATCTTCACAGCCACTCCCTTCTCTGGCCTTGGCCTGCA
CGAGCACCTAATCCGCGTCTTGGAGGCCCCTCGGGAGCACCACGGCTTGG
GACTGCGTGTGGCCACCCGCGTCCAAAGCGCTGCTCTCCCCGCACTGCTT
CAATCCGCCCGCCCCAATGCCCTGATCTGCTCTGAAACGGGGTCTGGTAA
AACCCTTGCCTACCTGCTTCCTATCCTGCAGCACTTGCAGGCGCTACAGC
CACGGCCttcgagggcggaggggacgcGTGCCATCATTGTGGCGCCGACC
CGGGAGCTCAGTCACCAGATATACGACGTCTTGTCTCTTCTCGTCCGAGC
TTTCATTTGGATCGTTCCAGGGCTGGTGAGTGGTGGAGAGAAGCGCAAAT
CGGAGAAAGCGCGCCTGCGGAAAGGCGTGACGGTCCTGGTGGGGACACCC
GGGCGGTTGTTGGACCACCTGCAGAACAGTCAAGCCTTTCGGCACGAGGC
CACGGAGTGGctggtgctggacgaggtCGACCGGTTGTTGGATTTGGGAT
TCGAAGCGCAGGTTCGTGAAATTGTGGAAAAGTTGCGGACGGgccgagag
gggggaagcagtGGGCAAGAGGAAGCCAGGGCTAGAGTACAGGTGCtagc
cgcctccgccaccctgACGGCCGCCTTGGACAAGTTTGGGTGCGAGCTAT
TGGGTCAGCATGTGCGGATCGATGCCAAGACTGGAACGGTGGTAGATGTC
GATGTCGCCGCGACtcccggagggggggaaatgggggCGAcagacggaga
gggagggggccaagACGGGAGGCCGATAGGTGGGAAAGATGATGctgtgg
aagggaggaagggtgaaAATTTACCAGGAGACGCCACGCCTAACGCCACT
AGCAGTGAGATGAGCGATCATTTCACGACACCCGTTCAGCTGATACAGCA
GTACATGGTTGTCACTTGCAAGCTTCGCCTGCCTGCCCTCATATCCTTCT
TGCGTGTGCATGCCAAATCCCATAAAACTGTCATTTTCTGCTCGACCTGT
GACTCTGTCGACTTCCACTACGCCCTTTTCGAGACCAGGCTAGAGGGAAA
CGAAAGAGGGGCAGATAAAATCGGGAAATCCTCACATACGCTGCCgtcgg
aggacgcggcggaaCAGCCATTGCTGGGCTCGGATATGCCCGTCTACAGG
TTGCACGGCAATATTCCCCAAGCTGCGCGCTTGCTCGCATTCAAAACCTT
CCGACAGGCACCCCGCGGAGTCCTGTTCTGTACTGACGTGGCGGCTCGAG
GTTTGGACTTACCTGCGGTCGATTGGATCGTGCAGTACGATCCTCCCACA
GAGACAGCGGAGTACGTGCACCGGGTGGGCCGGACGGCGCGGCGAGGTCG
TCAAGGACATTCGATTCTCTTCCTCTTACCTTCTGAGCAGGGTTACTTAA
ACGTACTTAAAAATCGCGGAATCACTCTCACGCCCTTGTCATTGCAGCAG
ACGCTGTTTGAGGCCACGCCTGCGCGTTTTAAGGGACGCTTTCGGGGGCC
TGAGGAGGTCTTCTGCCTGGATATCCAGCAACAATTGGAGAGAGCTGTCG
Ccacggcgaaggaggagagaggtatgaatgagaggaaaggaaatgcttcc
tcgcctttgCTCGCGCTCGGACGCAAGGCGTTCGGCTCTTTTGTTCGGGC
CTACGCCACTCACCCGGCTGACTTGAAGCCAATCTTTGCGGTTCGTGCTC
TACATCTTGGCCATGTTGCTAAAAGTTTTGCACTAAAGGAGCCTCCTACC
TCATTGAAAGTGGGCAAGGAAGTGATGAAAATTTCCAGCCAAAGGCAAAG
CGCAAGTGAGCATGACCAAAATGGGAAGAGTAAGCATGGTGGTGACGACT
TGCGAGACACTGACAGCGAGACAGTCAGAAAGATGGCGACCAAAAATACG
CAAAAAGCTTTTCAGTCACCTCGTAAGCAATCAACAGGTAGCAAGCGCAG
GAGTCGCACAGCCTTCAGCTCTGTTAGTGAGTTTAGTGCGGGATAA back to topCoding sequence (CDS) from alignment at CM002455.1:1113976..1116921+ >rna447 ID=rna447|Name=rna447|organism=Nannochloropsis gaditana|type=CDS|length=2946bp|location=Sequence derived from alignment at CM002455.1:1113976..1116921+ (Nannochloropsis gaditana) ATGGAGTTAAATATCGTTGAGATACCGAAGCTCAATGCTACTCGTAGCCA AAACGGAGAAAAGCCTCTCCGCTTCGTAAAGCGGCATCGTTTTAAGGCCA AGCGCGAGCGCCAGGGGGATACTAAAGTGGGTCTGGGCAGCTTGCGCATC AAAGAAGCTCCGTTGGTTGGTCCCGAGCCCACAGCATCAGGCCAAAAACC ACGTAGCGTGAAGATAAACAAGCCGCAAGACTTGTCGTCTACAGCTTTGG TTCTTGGCAAAAAACGAAAACTAAGGGGAGACCTGCTGTCCGAGCAGCAG GAACACGAGGTGGACGGTCCCCTCAAGCGGCGGACAATCTCCCACTCGAT GCACCCAACATCTCGCACAGACGTCCCGGTGGTTGAAGGTCATGAAGGCA AGGAAATGAAGAGTAGGCTTACAGATTCGGCCTCTACGCCTGTTGCCCTG GGACGTGCGCCGTCCTCGGATTCCTTGGTGAGGGTCTCCGAGAACGAGGA AGGCAAGCGGACTGCGCATTGTCGTCTTGGAATTGTGTCTACGACATCGA TGCCGAGGCCGTCAAAACCCTCAAAAGATGAAGATGACAAGACTGCCCCA ACCAAAACGCGCCCACCTACAAAGGCCAGCACCAGTCGCGAGGCGATCGA TCCCTCTTCACGCGAATCGAGTACGGCCATCGACCTGGGACCTGGGGGTT CAAGATGTGGTTCGCCATTCACACCACTGTGCACAGGATATAGTCGTAAA AACCCTGCACCTGCCTCAGCTGCCCGCCTGGATGAGTTCCACATCAAACC CTCCGAGCTCGACATGGTCACTGCCGCAGTGCCTACCGGCAGAGATAAAG AAGGCGCTACAGCTTCTACCTCCGACCCAGCGTCTGccaggaagagaaaa ataaGCAAACACATCTTCACAGCCACTCCCTTCTCTGGCCTTGGCCTGCA CGAGCACCTAATCCGCGTCTTGGAGGCCCCTCGGGAGCACCACGGCTTGG GACTGCGTGTGGCCACCCGCGTCCAAAGCGCTGCTCTCCCCGCACTGCTT CAATCCGCCCGCCCCAATGCCCTGATCTGCTCTGAAACGGGGTCTGGTAA AACCCTTGCCTACCTGCTTCCTATCCTGCAGCACTTGCAGGCGCTACAGC CACGGCCttcgagggcggaggggacgcGTGCCATCATTGTGGCGCCGACC CGGGAGCTCAGTCACCAGATATACGACGTCTTGTCTCTTCTCGTCCGAGC TTTCATTTGGATCGTTCCAGGGCTGGTGAGTGGTGGAGAGAAGCGCAAAT CGGAGAAAGCGCGCCTGCGGAAAGGCGTGACGGTCCTGGTGGGGACACCC GGGCGGTTGTTGGACCACCTGCAGAACAGTCAAGCCTTTCGGCACGAGGC CACGGAGTGGctggtgctggacgaggtCGACCGGTTGTTGGATTTGGGAT TCGAAGCGCAGGTTCGTGAAATTGTGGAAAAGTTGCGGACGGgccgagag gggggaagcagtGGGCAAGAGGAAGCCAGGGCTAGAGTACAGGTGCtagc cgcctccgccaccctgACGGCCGCCTTGGACAAGTTTGGGTGCGAGCTAT TGGGTCAGCATGTGCGGATCGATGCCAAGACTGGAACGGTGGTAGATGTC GATGTCGCCGCGACtcccggagggggggaaatgggggCGAcagacggaga gggagggggccaagACGGGAGGCCGATAGGTGGGAAAGATGATGctgtgg aagggaggaagggtgaaAATTTACCAGGAGACGCCACGCCTAACGCCACT AGCAGTGAGATGAGCGATCATTTCACGACACCCGTTCAGCTGATACAGCA GTACATGGTTGTCACTTGCAAGCTTCGCCTGCCTGCCCTCATATCCTTCT TGCGTGTGCATGCCAAATCCCATAAAACTGTCATTTTCTGCTCGACCTGT GACTCTGTCGACTTCCACTACGCCCTTTTCGAGACCAGGCTAGAGGGAAA CGAAAGAGGGGCAGATAAAATCGGGAAATCCTCACATACGCTGCCgtcgg aggacgcggcggaaCAGCCATTGCTGGGCTCGGATATGCCCGTCTACAGG TTGCACGGCAATATTCCCCAAGCTGCGCGCTTGCTCGCATTCAAAACCTT CCGACAGGCACCCCGCGGAGTCCTGTTCTGTACTGACGTGGCGGCTCGAG GTTTGGACTTACCTGCGGTCGATTGGATCGTGCAGTACGATCCTCCCACA GAGACAGCGGAGTACGTGCACCGGGTGGGCCGGACGGCGCGGCGAGGTCG TCAAGGACATTCGATTCTCTTCCTCTTACCTTCTGAGCAGGGTTACTTAA ACGTACTTAAAAATCGCGGAATCACTCTCACGCCCTTGTCATTGCAGCAG ACGCTGTTTGAGGCCACGCCTGCGCGTTTTAAGGGACGCTTTCGGGGGCC TGAGGAGGTCTTCTGCCTGGATATCCAGCAACAATTGGAGAGAGCTGTCG Ccacggcgaaggaggagagaggtatgaatgagaggaaaggaaatgcttcc tcgcctttgCTCGCGCTCGGACGCAAGGCGTTCGGCTCTTTTGTTCGGGC CTACGCCACTCACCCGGCTGACTTGAAGCCAATCTTTGCGGTTCGTGCTC TACATCTTGGCCATGTTGCTAAAAGTTTTGCACTAAAGGAGCCTCCTACC TCATTGAAAGTGGGCAAGGAAGTGATGAAAATTTCCAGCCAAAGGCAAAG CGCAAGTGAGCATGACCAAAATGGGAAGAGTAAGCATGGTGGTGACGACT TGCGAGACACTGACAGCGAGACAGTCAGAAAGATGGCGACCAAAAATACG CAAAAAGCTTTTCAGTCACCTCGTAAGCAATCAACAGGTAGCAAGCGCAG GAGTCGCACAGCCTTCAGCTCTGTTAGTGAGTTTAGTGCGGGATAA back to top
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