EWM30350.1, cds447 (CDS) Nannochloropsis gaditana

Overview
NameEWM30350.1
Unique Namecds447
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1113976..1116921 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30350.1
Productputative atp-dependent rna helicase ddx31
Orig transcript idgnl|cribi|Naga_100003g34.1867.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1113976..1116921 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003723RNA binding
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR014014RNA_helicase_DEAD_Q_motif
IPR025313DUF4217
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
Homology
BLAST of EWM30350.1 vs. NCBI_GenBank
Match: gi|585113009|gb|EWM30350.1| (putative atp-dependent rna helicase ddx31 [Nannochloropsis gaditana])

HSP 1 Score: 1995.7 bits (5169), Expect = 0.000e+0
Identity = 981/981 (100.00%), Postives = 981/981 (100.00%), Query Frame = 0
Query:    1 MELNIVEIPKLNATRSQNGEKPLRFVKRHRFKAKRERQGDTKVGLGSLRIKEAPLVGPEPTASGQKPRSVKINKPQDLSSTALVLGKKRKLRGDLLSEQQEHEVDGPLKRRTISHSMHPTSRTDVPVVEGHEGKEMKSRLTDSASTPVALGRAPSSDSLVRVSENEEGKRTAHCRLGIVSTTSMPRPSKPSKDEDDKTAPTKTRPPTKASTSREAIDPSSRESSTAIDLGPGGSRCGSPFTPLCTGYSRKNPAPASAARLDEFHIKPSELDMVTAAVPTGRDKEGATASTSDPASARKRKISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGREGGSSGQEEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGEMGATDGEGGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFLRVHAKSHKTVIFCSTCDSVDFHYALFETRLEGNERGADKIGKSSHTLPSEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATPARFKGRFRGPEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTSLKVGKEVMKISSQRQSASEHDQNGKSKHGGDDLRDTDSETVRKMATKNTQKAFQSPRKQSTGSKRRSRTAFSSVSEFSAG 981
            MELNIVEIPKLNATRSQNGEKPLRFVKRHRFKAKRERQGDTKVGLGSLRIKEAPLVGPEPTASGQKPRSVKINKPQDLSSTALVLGKKRKLRGDLLSEQQEHEVDGPLKRRTISHSMHPTSRTDVPVVEGHEGKEMKSRLTDSASTPVALGRAPSSDSLVRVSENEEGKRTAHCRLGIVSTTSMPRPSKPSKDEDDKTAPTKTRPPTKASTSREAIDPSSRESSTAIDLGPGGSRCGSPFTPLCTGYSRKNPAPASAARLDEFHIKPSELDMVTAAVPTGRDKEGATASTSDPASARKRKISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGREGGSSGQEEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGEMGATDGEGGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFLRVHAKSHKTVIFCSTCDSVDFHYALFETRLEGNERGADKIGKSSHTLPSEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATPARFKGRFRGPEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTSLKVGKEVMKISSQRQSASEHDQNGKSKHGGDDLRDTDSETVRKMATKNTQKAFQSPRKQSTGSKRRSRTAFSSVSEFSAG
Sbjct:    1 MELNIVEIPKLNATRSQNGEKPLRFVKRHRFKAKRERQGDTKVGLGSLRIKEAPLVGPEPTASGQKPRSVKINKPQDLSSTALVLGKKRKLRGDLLSEQQEHEVDGPLKRRTISHSMHPTSRTDVPVVEGHEGKEMKSRLTDSASTPVALGRAPSSDSLVRVSENEEGKRTAHCRLGIVSTTSMPRPSKPSKDEDDKTAPTKTRPPTKASTSREAIDPSSRESSTAIDLGPGGSRCGSPFTPLCTGYSRKNPAPASAARLDEFHIKPSELDMVTAAVPTGRDKEGATASTSDPASARKRKISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGREGGSSGQEEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGEMGATDGEGGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFLRVHAKSHKTVIFCSTCDSVDFHYALFETRLEGNERGADKIGKSSHTLPSEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATPARFKGRFRGPEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTSLKVGKEVMKISSQRQSASEHDQNGKSKHGGDDLRDTDSETVRKMATKNTQKAFQSPRKQSTGSKRRSRTAFSSVSEFSAG 981          
BLAST of EWM30350.1 vs. NCBI_GenBank
Match: gi|553194185|ref|XP_005855901.1| (dead box atp-dependent rna, partial [Nannochloropsis gaditana CCMP526] >gi|422293164|gb|EKU20464.1| dead box atp-dependent rna, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1127.85 bits (2916), Expect = 0.000e+0
Identity = 562/573 (98.08%), Postives = 565/573 (98.60%), Query Frame = 0
Query:    1 MELNIVEIPKLNATRSQNGEKPLRFVKRHRFKAKRERQGDTKVGLGSLRIKEAPLVGPEPTASGQKPRSVKINKPQDLSSTALVLGKKRKLRGDLLSEQQEHEVDGPLKRRTISHSMHPTSRTDVPVVEGHEGKEMKSRLTDSASTPVALGRAPSSDSLVRVSENEEGKRTAHCRLGIVSTTSMPRPSKPSKDEDDKTAPTKTRPPTKASTSREAIDPSSRESSTAIDLGPGGSRCGSPFTPLCTGYSRKNPAPASAARLDEFHIKPSELDMVTAAVPTGRDKEGATASTSDPASARKRKISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGREGGSSGQEEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGEMGATDGEGGGQDG 573
            MELNIVEIPKLNATRSQNGEKPLRFVKRHRFKAKRERQGDTKVGLGSLRIKEAPLVGPEPTASGQKPRSVKINKPQDLSSTALVLGKKRKLRGDLLSEQQEHEVDGPLKRRTISHS HPTSRTDVPV EGHEGK MKSRLTDS STPVA GRAPSSDSLVRVSE+EEGKRTAHCRLG VSTTSMPRPSKPSKDEDDKTAPTKTRPPTKASTSREA DPSSRESSTAIDLGPGGSRCGSPFTPLCTGYSRKNPAPASAARLDEFHIKPSELDMVTAAVPTGRDKEGATASTSDP SARKRKISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGREGGSSG+EEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGG+MGATDGEGGGQDG
Sbjct:    1 MELNIVEIPKLNATRSQNGEKPLRFVKRHRFKAKRERQGDTKVGLGSLRIKEAPLVGPEPTASGQKPRSVKINKPQDLSSTALVLGKKRKLRGDLLSEQQEHEVDGPLKRRTISHSTHPTSRTDVPVGEGHEGKGMKSRLTDSVSTPVAPGRAPSSDSLVRVSESEEGKRTAHCRLGSVSTTSMPRPSKPSKDEDDKTAPTKTRPPTKASTSREATDPSSRESSTAIDLGPGGSRCGSPFTPLCTGYSRKNPAPASAARLDEFHIKPSELDMVTAAVPTGRDKEGATASTSDPTSARKRKISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGREGGSSGREEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGQMGATDGEGGGQDG 573          
BLAST of EWM30350.1 vs. NCBI_GenBank
Match: gi|553194163|ref|XP_005855896.1| (putative atp-dependent rna helicase ddx31, partial [Nannochloropsis gaditana CCMP526] >gi|422293159|gb|EKU20459.1| putative atp-dependent rna helicase ddx31, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 847.04 bits (2187), Expect = 0.000e+0
Identity = 408/414 (98.55%), Postives = 410/414 (99.03%), Query Frame = 0
Query:  568 GGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFLRVHAKSHKTVIFCSTCDSVDFHYALFETRLEGNERGADKIGKSSHTLPSEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATPARFKGRFRGPEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTSLKVGKEVMKISSQRQSASEHDQNGKSKHGGDDLRDTDSETVRKMATKNTQKAFQSPRKQSTGSKRRSRTAFSSVSEFSAG 981
            GGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFLRVHAKSHKTVIFCSTCDSVDFHYALFETRLEGNERGADK GKSSHTL SEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATPARFKGRFR PEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPT+LKVGKEVMKISSQRQS SEHDQNGKSKHGGDDLRDTDSETVRKMATKNTQKAFQSPRK+STGSKRRSRTAFSSVSEFSAG
Sbjct:    1 GGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFLRVHAKSHKTVIFCSTCDSVDFHYALFETRLEGNERGADKSGKSSHTLSSEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATPARFKGRFRAPEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTALKVGKEVMKISSQRQSVSEHDQNGKSKHGGDDLRDTDSETVRKMATKNTQKAFQSPRKRSTGSKRRSRTAFSSVSEFSAG 414          
BLAST of EWM30350.1 vs. NCBI_GenBank
Match: gi|299470697|emb|CBN79743.1| (DEAD box helicase [Ectocarpus siliculosus])

HSP 1 Score: 518.85 bits (1335), Expect = 2.268e-162
Identity = 317/693 (45.74%), Postives = 406/693 (58.59%), Query Frame = 0
Query:  260 LDEFHIKPSELDMVTAAVPTGRDKEGATASTSDPASARKRKISKHIFTATP---FSGLGLHEHLIRVLEAPREHHGLGLRVA---TRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKL-------RTGREGGSSGQEEARA------RVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGEMGATDGEGGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFLRVHAKSHKTVIFCSTCDSVDFHYALF----------ETRLEGNERGADKIGKSSHTLPSED--------AAEQPL-----LGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATPARFKGRFRGPEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTSLKVGKEVMK 910
            L E H +P EL    A  P               ASAR    S H+  A P   F+ L L   ++  LE P+ + G G       T  Q AA+P L  +A  N +I SETGSGKTLAYLLP+L  L +++PR  R +GT AI++APTREL  QI +VL+ +VR FIW+VPG +SGGE+RKSEKARLRKGVTVLV TPGRLLDHL+ ++ FR ++  WL+LDE DRLLD+GFE QV+EIVE L       R+G  GGS  Q  A        R Q +  SATL   + +    LL +H+R+DA T  V  VD A     G++    GE G    +   G+++   G  G+ LP + T  + ++E    F+TP QL+Q YM VT KLRLPAL +FLR  A + K V+F STCD+VDFH+ LF              +G E   ++ G+SS     ++        A ++PL      G    V RLHGN+PQ  R   ++ F  A  G+L CTDVAARGLDLP VDWIVQYDPP ETA+YVHRVGRTAR+G +GHS+LFLLP E  YL VL+ RG+   PLSL+  L  A   +   R    +E    ++QQ L+  VA  K              PLL   R AF S VRAYA    D + +F VR+LHLGHVA+SFALK+PPT++KVGK V++
Sbjct:  523 LPEHHARPRELSRRAAVRPL--------------ASAR----SAHVMAAGPGATFAALKLPPKMVSHLEEPKGNLGGGGMGLAGPTVCQLAAVPVL--AAGNNTVIKSETGSGKTLAYLLPMLCDLASVEPRVDREKGTLAIVLAPTRELGSQILEVLTRVVRPFIWLVPGSLSGGERRKSEKARLRKGVTVLVCTPGRLLDHLKTTKCFRRDSLRWLILDEADRLLDMGFEKQVKEIVELLDQSARAVRSGPAGGSRVQGGAVVPSTKVIRRQTVMVSATLDKGVSRLSAALLSKHIRVDADTNVVESVDEA-----GKVKHISGERGTSSSKTKTGRNEVHGG--GDGLPSEGTDGSANTE---EFSTPRQLVQYYMTVTQKLRLPALCAFLRARA-AEKVVVFMSTCDAVDFHHDLFRRAGWPGDSPSPSPDGGEGSPNEAGRSSGGSAEDNGKKKTAATAGKKPLPDGEFFGPGCLVRRLHGNVPQNERQATYRAFGAAKSGILICTDVAARGLDLPTVDWIVQYDPPAETADYVHRVGRTARKGERGHSLLFLLPREVAYLGVLEARGLRPKPLSLEGVLCAADAGKRDARR--ADEQLAYELQQGLQLLVAGDK--------------PLLDRARSAFQSHVRAYAARAPDSRAVFQVRSLHLGHVARSFALKDPPTAVKVGKRVVR 1168          
BLAST of EWM30350.1 vs. NCBI_GenBank
Match: gi|695383764|ref|XP_009517807.1| (hypothetical protein PHYSODRAFT_477816 [Phytophthora sojae] >gi|348690718|gb|EGZ30532.1| hypothetical protein PHYSODRAFT_477816 [Phytophthora sojae])

HSP 1 Score: 449.129 bits (1154), Expect = 7.583e-142
Identity = 263/621 (42.35%), Postives = 351/621 (56.52%), Query Frame = 0
Query:  302 SKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGREGGSSGQEEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGEMGATDGEGGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFLRVHAK-------------SHKTVIFCSTCDSVDFHYALFETRLEGNERGADKIGKSSHTLPSEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATPARFKG-----RFRGPEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTSLKV 904
            S+ IF A  F  + + E L+ VL+      G G    T VQ   +P++L+    + L+ SETGSGKTL+YLLPI+Q LQ++ PR  R +G  A+++APTREL  QI +  + L++ F+++VPG + GGEK+K+EKARLRKG+T+L+ TPGRL DHL N+Q+F +   ++LVLDE DRLLD+GFE Q+ +I+  L         GQ+ A+ R  +L  SAT+ + + +     L   V IDA   T            GE  AT+                 ++ R  E                  F+TP QL+Q +M+V  K RL AL  FLR   +               K V+F STCD+VDFHYALF      + +G+ +   SS            L GS  PV+RLHGNIPQ  R+  FK+F  +  GVL CTDVAARGL+LP V WIVQYDPPTET +YVHRVGRTAR G QG S+LFL+PSE  YL+ L  +G+ L  LSL++T+  A   +  G     R +   EV   D+Q   E+ +   KE              L  L  +AF SFVR+YATH +D + IF VR+LH GHVAKSFAL+EPP S K+
Sbjct:   98 SEKIFAANTFESMNMAEKLVNVLKKDASCGGFGFARPTNVQVQTIPSVLKGN--DILVKSETGSGKTLSYLLPIVQKLQSVSPRIQRQDGCMALVLAPTRELCTQIMETANKLIQPFVFLVPGAIIGGEKKKAEKARLRKGITILIATPGRLADHLVNTQSFNYTQLQFLVLDEADRLLDMGFEKQITQILSIL--------DGQKSAKKRQNIL-VSATINSGVQQLAKMSLSNPVLIDADAVT-----------SGEDAATE-----------------IKARSQEK-----------------FSTPHQLMQHFMLVPAKARLCALTCFLREELRHAPRDNKKDGGPGKCKIVVFLSTCDAVDFHYALFRKCAWPSGKGSSEEADSSG-----GNGVASLFGSQGPVFRLHGNIPQQERVTTFKSFCSSSSGVLLCTDVAARGLNLPTVKWIVQYDPPTETRDYVHRVGRTARSGNQGSSLLFLMPSESEYLDYLTKQGLKLNALSLEKTI--ARVGKHGGFLTTSRKKLLHEVVQGDLQFLYEQTLLADKE--------------LFELACQAFHSFVRSYATHSSDTRQIFHVRSLHFGHVAKSFALREPPASAKL 641          
BLAST of EWM30350.1 vs. NCBI_GenBank
Match: gi|602636815|ref|XP_007425259.1| (PREDICTED: probable ATP-dependent RNA helicase DDX31 isoform X1 [Python bivittatus])

HSP 1 Score: 395.586 bits (1015), Expect = 4.629e-121
Identity = 237/608 (38.98%), Postives = 327/608 (53.78%), Query Frame = 0
Query:  299 RKISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGREGGSSGQEEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGEMGATDGEGGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFL---RVHAKSHKTVIFCSTCDSVDFHYALFETRLEGNERGADKIGKSSHTLPSEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATP-ARFKGRFRGPEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTSL 902
            ++I + +FT+  F  L LH HLI  + +      L +   T VQ   +P LLQ    +AL+ S+TGSGKTLAY +P++Q LQ L+P+  R++G  A+++ PTREL  Q ++ L  L++ F WIVPG++ GGEK+KSEKARLRKG+ +LV TPGRL+DH++++Q        WL+LDE DR+LDLGFE  V  I+  +             A  + Q +  SATLT  + +            D      + V VAA P G                           R G+    +A    ++ E    F  P +L Q  ++V  KLRL  L +F+       K HK ++F S+C+ V+FHY LF                       E     P L S +   RLHG++ Q  R   F+ F Q+  GVL CTDVAARGLDLP V WIVQY+PP   AEYVHR+GRTAR G  G+S+L LLPSE  Y+N L +  I ++ + ++  L       RFKG   G ++    D Q+   RA     E     E   ++S+  +   +KA  SF+R+YAT+PA+LKPIF VRALHLGHVAKSF L++ P +L
Sbjct:  121 KQIQEEVFTSDSFDQLDLHPHLISTITS-----CLKISSMTSVQKETIPRLLQGK--DALVRSQTGSGKTLAYSIPLVQSLQKLEPKIKRSDGPYALVLVPTRELVLQSFETLQKLLKPFTWIVPGVLMGGEKKKSEKARLRKGINILVATPGRLVDHIKSTQCIHFRCIRWLILDEADRILDLGFEKAVAAILNAVNA-----------ASPKRQNVLLSATLTDGVSRLA----------DISLQDPICVSVAAEPPGS------------------------NPRLGKGYVQEAVDIPSAGEELGSFAVPEKLRQNVVMVPSKLRLVTLAAFIFGKFKFEKRHKMIVFFSSCEQVEFHYVLFRK-------------VLGGEPGGEGVGLSPALPSPLKFARLHGDMKQEERSSVFQAFLQSKTGVLLCTDVAARGLDLPQVTWIVQYNPPNSLAEYVHRIGRTARIGSPGNSLLLLLPSEAEYVNFLASYKINVSEMKMELILSNLMKDDRFKGSQWGSKKTRQGDAQEMHRRATVMQTE----FEDFVHSSTKTIRGAKKALQSFIRSYATYPANLKPIFHVRALHLGHVAKSFGLRDAPGNL 659          
BLAST of EWM30350.1 vs. NCBI_GenBank
Match: gi|1004667498|ref|XP_015743047.1| (PREDICTED: probable ATP-dependent RNA helicase DDX31 isoform X2 [Python bivittatus])

HSP 1 Score: 391.349 bits (1004), Expect = 1.894e-119
Identity = 237/608 (38.98%), Postives = 326/608 (53.62%), Query Frame = 0
Query:  299 RKISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGREGGSSGQEEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGEMGATDGEGGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFL---RVHAKSHKTVIFCSTCDSVDFHYALFETRLEGNERGADKIGKSSHTLPSEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATP-ARFKGRFRGPEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTSL 902
            ++I + +FT+  F  L LH HLI  + +      L +   T VQ   +P LLQ    +AL+ S+TGSGKTLAY +P++Q LQ L+P+  R++G  A+++ PTREL  Q ++ L  L++ F WIVPG++ GGEK+KSEKARLRKG+ +LV TPGRL+DH++++Q        WL+LDE DR+LDLGFE  V  I+  +             A  + Q +  SATLT  + +            D      + V VAA P G                           R G+    +A    ++ E    F  P +L Q  ++V  KLRL  L +F+       K HK ++F S+C+ V+FHY LF                       E     P L S +   RLHG++ Q  R   F+ F Q+  GVL CTDVAARGLDLP V WIVQY+PP   AEYVHR+GRTAR G  G+S+L LLPSE  Y+N L +  I ++ + ++  L       RFKG   G  +    D Q+   RA     E     E   ++S+  +   +KA  SF+R+YAT+PA+LKPIF VRALHLGHVAKSF L++ P +L
Sbjct:  121 KQIQEEVFTSDSFDQLDLHPHLISTITS-----CLKISSMTSVQKETIPRLLQGK--DALVRSQTGSGKTLAYSIPLVQSLQKLEPKIKRSDGPYALVLVPTRELVLQSFETLQKLLKPFTWIVPGVLMGGEKKKSEKARLRKGINILVATPGRLVDHIKSTQCIHFRCIRWLILDEADRILDLGFEKAVAAILNAVNA-----------ASPKRQNVLLSATLTDGVSRLA----------DISLQDPICVSVAAEPPGS------------------------NPRLGKGYVQEAVDIPSAGEELGSFAVPEKLRQNVVMVPSKLRLVTLAAFIFGKFKFEKRHKMIVFFSSCEQVEFHYVLFRK-------------VLGGEPGGEGVGLSPALPSPLKFARLHGDMKQEERSSVFQAFLQSKTGVLLCTDVAARGLDLPQVTWIVQYNPPNSLAEYVHRIGRTARIGSPGNSLLLLLPSEAEYVNFLASYKINVSEMKMELILSNLMKDDRFKGSQWG-SKTRQGDAQEMHRRATVMQTE----FEDFVHSSTKTIRGAKKALQSFIRSYATYPANLKPIFHVRALHLGHVAKSFGLRDAPGNL 658          
BLAST of EWM30350.1 vs. NCBI_GenBank
Match: gi|831284086|ref|XP_012673250.1| (PREDICTED: probable ATP-dependent RNA helicase DDX31 [Clupea harengus])

HSP 1 Score: 395.201 bits (1014), Expect = 2.911e-119
Identity = 238/608 (39.14%), Postives = 328/608 (53.95%), Query Frame = 0
Query:  300 KISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGREGGSSGQEEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGEMGATDGEGGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFLRVHAK---SHKTVIFCSTCDSVDFHYALFETRLEGNERGADKIGKSSHTLPSEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTL-FEATPARFKGRFRGPEEVFCLDIQQQL-ERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTSL 902
            ++ + +FT   FS LGLH HL+  L     H  L +   T V    LP LL  A  +A++ S+TGSGKTLAY +PI+Q LQA+ P+  R +G  A+IV PTREL+ Q + +   LV+ F WIVPG++ GGEKRK+EKARLRKG+ +LV TPGRL+DH+ N+ +    +  WL+LDE DR LDLGFE  +  I+  L  G             R  VL  SATLT  L +     +   V +      V               A   EGGG++           E ++ +     ATP   + E ++ F  P +L Q  +VV  KLRL  L +F+    K     K ++F S+C++V+F        L G +  AD   K   T P       P     +   RLHGN+ Q  R+  F+ F +   GVL CTDVAARGLDLP V WI+QY+PP   AEYVHRVGRTAR G +G S+LFL P+E  Y+++L N  I+++ + L+  L       RF+ R R   +     I+Q+  ERA       +   E   +A    +   ++A  SFVR+Y T+P++LK IF +R LHLGH AKSF L++ P +L
Sbjct:  249 QLKEKVFTTDSFSELGLHPHLVATL-----HKVLNVTSMTSVSKQTLPVLL--AGKDAVVRSQTGSGKTLAYGIPIVQALQAVVPKIKRGDGPLAVIVVPTRELAQQSFQIFQKLVKPFTWIVPGVLMGGEKRKAEKARLRKGINILVSTPGRLVDHINNTLSIVFSSVRWLILDEADRTLDLGFEKDLAVILNALNAGDS----------PRQNVL-LSATLTEGLSRLADICMKNPVSVHVSEDAV--------------SAHVSEGGGKEN---------TEAKQAQ-----ATPVCEAGEQAERFAVPEKLQQHMVVVPSKLRLVCLAAFILDKCKFESGQKLIVFVSSCEAVEFLLTALTAVLCGQQDNADTPKK---TPPKNKNVTPP---KPINFLRLHGNMKQGERMEVFQEFSKCRSGVLLCTDVAARGLDLPQVTWIIQYNPPLSAAEYVHRVGRTARIGTEGSSLLFLTPAEVAYVDILANHNISMSEMKLENILSVLLKDERFRCRGRWDNKKGQAAIEQETRERATVL----QTAFENLVHAGEESVQTAKRALQSFVRSYTTYPSNLKHIFHLRNLHLGHAAKSFGLRDAPNNL 800          
BLAST of EWM30350.1 vs. NCBI_GenBank
Match: gi|971519356|dbj|GAQ78913.1| (hypothetical protein KFL_000200660 [Klebsormidium nitens])

HSP 1 Score: 392.504 bits (1007), Expect = 3.932e-119
Identity = 262/641 (40.87%), Postives = 350/641 (54.60%), Query Frame = 0
Query:  285 GATASTSDPASARKRKISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRT-GREGGSSGQEEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGEMGATDGEGGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFL----RVHAKSHKTVIFCSTCDSVDFHYALFETRLEGNERGADKIGKSSHTLPSEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATPARFKGRFRG---PE-EVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTSLKVGKEVMKISSQRQ 916
            GA  + S+P SA   + ++ +F+A+ F+ LGL   + + +E      GLG    T VQ AA+PA+L     +AL+ ++TGSGKTLAYL PI+  L     +  R +GT A+I+APTREL  QI  V   LV+ FIW+VPG + GGEK+  EKARLRKGVT+LV TPGRLLDHL+++ +FR +  +WL+ DE DRLLDLGFE  + +I+E L    ++G   G      R Q+   SATL A +D+     L   ++        V +D    P     GA+D       G                +L  D   +  +SE  + F  P QL Q Y+ V  KLRL  L +FL       A   K V+F STCD+V+FH+ L  T     E      GK + T  S             PV++LHGN+ Q  R   F  F +A  GVL CTDVAARGLD+PAV+ IVQYD P E  EYVHRVGRTAR G++G S LFL P+E  YL+VL  R + + PL+L   L E    R KGR +    PE     L ++++LE  +   +E R               L   AF SF+R+YA H   LK IF V+ LHLGHVA+SFALK+ PT L    + + +  ++Q
Sbjct:  199 GAKPAKSEPLSA---EAARSVFSASSFAELGLSAPVAQHIEG-----GLGFTAPTHVQKAAIPAMLTGR--DALVKADTGSGKTLAYLAPIVDQLAIRDKKVERHDGTYALILAPTRELCLQITGVAEKLVKRFIWLVPGQIMGGEKKAKEKARLRKGVTILVATPGRLLDHLKSTASFRLDNLQWLIFDEADRLLDLGFEKDIVQILEILDDPSKKGAYRG-----VRRQIALFSATLNARVDRLANLSLANPLK--------VGLDSPNPPA----GASDA------GPQAQDAAGGDADADAFDLEKD-LDDVFASEKDEQFRIPSQLRQFYIKVPWKLRLITLCTFLRAKTAAAAARCKAVVFFSTCDAVEFHHLLLSTFSLQEES-----GKEAGTYVS------------CPVFKLHGNLSQKERSQTFFAFGKAASGVLLCTDVAARGLDIPAVNVIVQYDTPGEAEEYVHRVGRTARLGQEGESFLFLQPNEVDYLDVLARRHVAVQPLALMGILDEIPLDRRKGRAKEALVPEVHPGVLALEKRLEGTLGKQRELR--------------QLATDAFRSFLRSYAAHRGSLKQIFHVKRLHLGHVARSFALKDAPTLLGQSSKKLAMKKEKQ 774          
BLAST of EWM30350.1 vs. NCBI_GenBank
Match: gi|567886832|ref|XP_006435938.1| (hypothetical protein CICLE_v10031043mg [Citrus clementina] >gi|557538134|gb|ESR49178.1| hypothetical protein CICLE_v10031043mg [Citrus clementina])

HSP 1 Score: 385.956 bits (990), Expect = 4.221e-119
Identity = 249/649 (38.37%), Postives = 343/649 (52.85%), Query Frame = 0
Query:  296 ARKRKISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGREGGSSGQ--EEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGEMGATDGEGGGQDGRPIGGKDDAVEGRKGENLPGDAT-----PNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFLRVHA----KSHKTVIFCSTCDSVDFHYALFETRLEGNERGADKIGKSSHTLPSEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTL----FEATPARFKGRFRGPEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTSLKVGKEVMKISSQRQ-SASEHDQNGKSK 928
            ++K++  K IF +  FS LGLH  L   L   RE   LG    T+VQ+ A+P +L S R + L+ + TG+GKT+AYL PI+ HLQ+  PR  R+ GT A+++ PTREL  Q+Y++L  L+  F WIVPG V GGE R  EKARLRKG+++LV TPGRLLDHL+++ +F H    W++ DE DR+L+LGF  ++ EI++ L + R  GS G+  E +  + Q L  SATL   ++           +I  +T  ++ +D    P                       +D    R G +L  D       P+ T    ++ F  P QL+Q+Y+ V C  RL  L+S L+ H      S K V+F STCD+VDFHY+L             +   S H+ P  +  +   L      +RLHGN+ Q  R+  F  F+   + +L  TDVAARGLD P V  I+QYD   E  EYVHRVGRTAR G +G S+LFL P E  YL  L+  G++LT   L + L          R K         + L +Q  LE  +                 S +  L + AF S+VRAY  H  +LK IF ++ LHLGHVAKSFALKE P+   VGK   K S +R+    +  Q+GK K
Sbjct:    2 SKKKETVKEIFASCSFSSLGLHSTLCDQL---RER--LGFEAPTKVQAQAIPVIL-SGR-HVLVNAATGTGKTVAYLAPIINHLQSYSPRIDRSSGTFALVLVPTRELCLQVYEILHKLLHRFHWIVPGYVMGGENRSKEKARLRKGISILVATPGRLLDHLKHTSSFLHTNLCWIIFDEADRILELGFGKEIEEILDILGS-RNIGSIGEGNEVSNVKRQNLLLSATLNEKVNHLA--------KISLETPVLIGLDEKKLP-----------------------EDKSHVRFG-SLESDVKEEVEHPSTTMRSTTEDFKLPAQLVQRYVKVPCGSRLAVLLSILK-HLFDTEVSQKLVVFFSTCDAVDFHYSLL-----------SEFQWSPHSQPDMELKQ---LFLRCKTFRLHGNMKQEDRITTFGAFKIEKKALLLSTDVAARGLDFPKVKCIIQYDSAGEATEYVHRVGRTARLGERGDSLLFLQPVEMDYLQDLEKHGVSLTEYPLLKVLDSFPLYGQKPRVKKFLTTESHPWILSLQNALESFII--------------HESKMKKLAKDAFCSWVRAYTAHRGELKRIFTLKKLHLGHVAKSFALKEQPSL--VGKSFQKQSKKRKRDQRQKGQSGKRK 579          
The following BLAST results are available for this feature:
BLAST of EWM30350.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113009|gb|EWM30350.1|0.000e+0100.00putative atp-dependent rna helicase ddx31 [Nannoch... [more]
gi|553194185|ref|XP_005855901.1|0.000e+098.08dead box atp-dependent rna, partial [Nannochlorops... [more]
gi|553194163|ref|XP_005855896.1|0.000e+098.55putative atp-dependent rna helicase ddx31, partial... [more]
gi|299470697|emb|CBN79743.1|2.268e-16245.74DEAD box helicase [Ectocarpus siliculosus][more]
gi|695383764|ref|XP_009517807.1|7.583e-14242.35hypothetical protein PHYSODRAFT_477816 [Phytophtho... [more]
gi|602636815|ref|XP_007425259.1|4.629e-12138.98PREDICTED: probable ATP-dependent RNA helicase DDX... [more]
gi|1004667498|ref|XP_015743047.1|1.894e-11938.98PREDICTED: probable ATP-dependent RNA helicase DDX... [more]
gi|831284086|ref|XP_012673250.1|2.911e-11939.14PREDICTED: probable ATP-dependent RNA helicase DDX... [more]
gi|971519356|dbj|GAQ78913.1|3.932e-11940.87hypothetical protein KFL_000200660 [Klebsormidium ... [more]
gi|567886832|ref|XP_006435938.1|4.221e-11938.37hypothetical protein CICLE_v10031043mg [Citrus cle... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna447rna447Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications