EWM30350.1, cds447 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30350.1 vs. NCBI_GenBank
Match: gi|585113009|gb|EWM30350.1| (putative atp-dependent rna helicase ddx31 [Nannochloropsis gaditana]) HSP 1 Score: 1995.7 bits (5169), Expect = 0.000e+0 Identity = 981/981 (100.00%), Postives = 981/981 (100.00%), Query Frame = 0
Query: 1 MELNIVEIPKLNATRSQNGEKPLRFVKRHRFKAKRERQGDTKVGLGSLRIKEAPLVGPEPTASGQKPRSVKINKPQDLSSTALVLGKKRKLRGDLLSEQQEHEVDGPLKRRTISHSMHPTSRTDVPVVEGHEGKEMKSRLTDSASTPVALGRAPSSDSLVRVSENEEGKRTAHCRLGIVSTTSMPRPSKPSKDEDDKTAPTKTRPPTKASTSREAIDPSSRESSTAIDLGPGGSRCGSPFTPLCTGYSRKNPAPASAARLDEFHIKPSELDMVTAAVPTGRDKEGATASTSDPASARKRKISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGREGGSSGQEEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGEMGATDGEGGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFLRVHAKSHKTVIFCSTCDSVDFHYALFETRLEGNERGADKIGKSSHTLPSEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATPARFKGRFRGPEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTSLKVGKEVMKISSQRQSASEHDQNGKSKHGGDDLRDTDSETVRKMATKNTQKAFQSPRKQSTGSKRRSRTAFSSVSEFSAG 981
MELNIVEIPKLNATRSQNGEKPLRFVKRHRFKAKRERQGDTKVGLGSLRIKEAPLVGPEPTASGQKPRSVKINKPQDLSSTALVLGKKRKLRGDLLSEQQEHEVDGPLKRRTISHSMHPTSRTDVPVVEGHEGKEMKSRLTDSASTPVALGRAPSSDSLVRVSENEEGKRTAHCRLGIVSTTSMPRPSKPSKDEDDKTAPTKTRPPTKASTSREAIDPSSRESSTAIDLGPGGSRCGSPFTPLCTGYSRKNPAPASAARLDEFHIKPSELDMVTAAVPTGRDKEGATASTSDPASARKRKISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGREGGSSGQEEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGEMGATDGEGGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFLRVHAKSHKTVIFCSTCDSVDFHYALFETRLEGNERGADKIGKSSHTLPSEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATPARFKGRFRGPEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTSLKVGKEVMKISSQRQSASEHDQNGKSKHGGDDLRDTDSETVRKMATKNTQKAFQSPRKQSTGSKRRSRTAFSSVSEFSAG
Sbjct: 1 MELNIVEIPKLNATRSQNGEKPLRFVKRHRFKAKRERQGDTKVGLGSLRIKEAPLVGPEPTASGQKPRSVKINKPQDLSSTALVLGKKRKLRGDLLSEQQEHEVDGPLKRRTISHSMHPTSRTDVPVVEGHEGKEMKSRLTDSASTPVALGRAPSSDSLVRVSENEEGKRTAHCRLGIVSTTSMPRPSKPSKDEDDKTAPTKTRPPTKASTSREAIDPSSRESSTAIDLGPGGSRCGSPFTPLCTGYSRKNPAPASAARLDEFHIKPSELDMVTAAVPTGRDKEGATASTSDPASARKRKISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGREGGSSGQEEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGEMGATDGEGGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFLRVHAKSHKTVIFCSTCDSVDFHYALFETRLEGNERGADKIGKSSHTLPSEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATPARFKGRFRGPEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTSLKVGKEVMKISSQRQSASEHDQNGKSKHGGDDLRDTDSETVRKMATKNTQKAFQSPRKQSTGSKRRSRTAFSSVSEFSAG 981
BLAST of EWM30350.1 vs. NCBI_GenBank
Match: gi|553194185|ref|XP_005855901.1| (dead box atp-dependent rna, partial [Nannochloropsis gaditana CCMP526] >gi|422293164|gb|EKU20464.1| dead box atp-dependent rna, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1127.85 bits (2916), Expect = 0.000e+0 Identity = 562/573 (98.08%), Postives = 565/573 (98.60%), Query Frame = 0
Query: 1 MELNIVEIPKLNATRSQNGEKPLRFVKRHRFKAKRERQGDTKVGLGSLRIKEAPLVGPEPTASGQKPRSVKINKPQDLSSTALVLGKKRKLRGDLLSEQQEHEVDGPLKRRTISHSMHPTSRTDVPVVEGHEGKEMKSRLTDSASTPVALGRAPSSDSLVRVSENEEGKRTAHCRLGIVSTTSMPRPSKPSKDEDDKTAPTKTRPPTKASTSREAIDPSSRESSTAIDLGPGGSRCGSPFTPLCTGYSRKNPAPASAARLDEFHIKPSELDMVTAAVPTGRDKEGATASTSDPASARKRKISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGREGGSSGQEEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGEMGATDGEGGGQDG 573
MELNIVEIPKLNATRSQNGEKPLRFVKRHRFKAKRERQGDTKVGLGSLRIKEAPLVGPEPTASGQKPRSVKINKPQDLSSTALVLGKKRKLRGDLLSEQQEHEVDGPLKRRTISHS HPTSRTDVPV EGHEGK MKSRLTDS STPVA GRAPSSDSLVRVSE+EEGKRTAHCRLG VSTTSMPRPSKPSKDEDDKTAPTKTRPPTKASTSREA DPSSRESSTAIDLGPGGSRCGSPFTPLCTGYSRKNPAPASAARLDEFHIKPSELDMVTAAVPTGRDKEGATASTSDP SARKRKISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGREGGSSG+EEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGG+MGATDGEGGGQDG
Sbjct: 1 MELNIVEIPKLNATRSQNGEKPLRFVKRHRFKAKRERQGDTKVGLGSLRIKEAPLVGPEPTASGQKPRSVKINKPQDLSSTALVLGKKRKLRGDLLSEQQEHEVDGPLKRRTISHSTHPTSRTDVPVGEGHEGKGMKSRLTDSVSTPVAPGRAPSSDSLVRVSESEEGKRTAHCRLGSVSTTSMPRPSKPSKDEDDKTAPTKTRPPTKASTSREATDPSSRESSTAIDLGPGGSRCGSPFTPLCTGYSRKNPAPASAARLDEFHIKPSELDMVTAAVPTGRDKEGATASTSDPTSARKRKISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGREGGSSGREEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGQMGATDGEGGGQDG 573
BLAST of EWM30350.1 vs. NCBI_GenBank
Match: gi|553194163|ref|XP_005855896.1| (putative atp-dependent rna helicase ddx31, partial [Nannochloropsis gaditana CCMP526] >gi|422293159|gb|EKU20459.1| putative atp-dependent rna helicase ddx31, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 847.04 bits (2187), Expect = 0.000e+0 Identity = 408/414 (98.55%), Postives = 410/414 (99.03%), Query Frame = 0
Query: 568 GGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFLRVHAKSHKTVIFCSTCDSVDFHYALFETRLEGNERGADKIGKSSHTLPSEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATPARFKGRFRGPEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTSLKVGKEVMKISSQRQSASEHDQNGKSKHGGDDLRDTDSETVRKMATKNTQKAFQSPRKQSTGSKRRSRTAFSSVSEFSAG 981
GGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFLRVHAKSHKTVIFCSTCDSVDFHYALFETRLEGNERGADK GKSSHTL SEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATPARFKGRFR PEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPT+LKVGKEVMKISSQRQS SEHDQNGKSKHGGDDLRDTDSETVRKMATKNTQKAFQSPRK+STGSKRRSRTAFSSVSEFSAG
Sbjct: 1 GGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFLRVHAKSHKTVIFCSTCDSVDFHYALFETRLEGNERGADKSGKSSHTLSSEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATPARFKGRFRAPEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTALKVGKEVMKISSQRQSVSEHDQNGKSKHGGDDLRDTDSETVRKMATKNTQKAFQSPRKRSTGSKRRSRTAFSSVSEFSAG 414
BLAST of EWM30350.1 vs. NCBI_GenBank
Match: gi|299470697|emb|CBN79743.1| (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 518.85 bits (1335), Expect = 2.268e-162 Identity = 317/693 (45.74%), Postives = 406/693 (58.59%), Query Frame = 0
Query: 260 LDEFHIKPSELDMVTAAVPTGRDKEGATASTSDPASARKRKISKHIFTATP---FSGLGLHEHLIRVLEAPREHHGLGLRVA---TRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKL-------RTGREGGSSGQEEARA------RVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGEMGATDGEGGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFLRVHAKSHKTVIFCSTCDSVDFHYALF----------ETRLEGNERGADKIGKSSHTLPSED--------AAEQPL-----LGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATPARFKGRFRGPEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTSLKVGKEVMK 910
L E H +P EL A P ASAR S H+ A P F+ L L ++ LE P+ + G G T Q AA+P L +A N +I SETGSGKTLAYLLP+L L +++PR R +GT AI++APTREL QI +VL+ +VR FIW+VPG +SGGE+RKSEKARLRKGVTVLV TPGRLLDHL+ ++ FR ++ WL+LDE DRLLD+GFE QV+EIVE L R+G GGS Q A R Q + SATL + + LL +H+R+DA T V VD A G++ GE G + G+++ G G+ LP + T + ++E F+TP QL+Q YM VT KLRLPAL +FLR A + K V+F STCD+VDFH+ LF +G E ++ G+SS ++ A ++PL G V RLHGN+PQ R ++ F A G+L CTDVAARGLDLP VDWIVQYDPP ETA+YVHRVGRTAR+G +GHS+LFLLP E YL VL+ RG+ PLSL+ L A + R +E ++QQ L+ VA K PLL R AF S VRAYA D + +F VR+LHLGHVA+SFALK+PPT++KVGK V++
Sbjct: 523 LPEHHARPRELSRRAAVRPL--------------ASAR----SAHVMAAGPGATFAALKLPPKMVSHLEEPKGNLGGGGMGLAGPTVCQLAAVPVL--AAGNNTVIKSETGSGKTLAYLLPMLCDLASVEPRVDREKGTLAIVLAPTRELGSQILEVLTRVVRPFIWLVPGSLSGGERRKSEKARLRKGVTVLVCTPGRLLDHLKTTKCFRRDSLRWLILDEADRLLDMGFEKQVKEIVELLDQSARAVRSGPAGGSRVQGGAVVPSTKVIRRQTVMVSATLDKGVSRLSAALLSKHIRVDADTNVVESVDEA-----GKVKHISGERGTSSSKTKTGRNEVHGG--GDGLPSEGTDGSANTE---EFSTPRQLVQYYMTVTQKLRLPALCAFLRARA-AEKVVVFMSTCDAVDFHHDLFRRAGWPGDSPSPSPDGGEGSPNEAGRSSGGSAEDNGKKKTAATAGKKPLPDGEFFGPGCLVRRLHGNVPQNERQATYRAFGAAKSGILICTDVAARGLDLPTVDWIVQYDPPAETADYVHRVGRTARKGERGHSLLFLLPREVAYLGVLEARGLRPKPLSLEGVLCAADAGKRDARR--ADEQLAYELQQGLQLLVAGDK--------------PLLDRARSAFQSHVRAYAARAPDSRAVFQVRSLHLGHVARSFALKDPPTAVKVGKRVVR 1168
BLAST of EWM30350.1 vs. NCBI_GenBank
Match: gi|695383764|ref|XP_009517807.1| (hypothetical protein PHYSODRAFT_477816 [Phytophthora sojae] >gi|348690718|gb|EGZ30532.1| hypothetical protein PHYSODRAFT_477816 [Phytophthora sojae]) HSP 1 Score: 449.129 bits (1154), Expect = 7.583e-142 Identity = 263/621 (42.35%), Postives = 351/621 (56.52%), Query Frame = 0
Query: 302 SKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGREGGSSGQEEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGEMGATDGEGGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFLRVHAK-------------SHKTVIFCSTCDSVDFHYALFETRLEGNERGADKIGKSSHTLPSEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATPARFKG-----RFRGPEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTSLKV 904
S+ IF A F + + E L+ VL+ G G T VQ +P++L+ + L+ SETGSGKTL+YLLPI+Q LQ++ PR R +G A+++APTREL QI + + L++ F+++VPG + GGEK+K+EKARLRKG+T+L+ TPGRL DHL N+Q+F + ++LVLDE DRLLD+GFE Q+ +I+ L GQ+ A+ R +L SAT+ + + + L V IDA T GE AT+ ++ R E F+TP QL+Q +M+V K RL AL FLR + K V+F STCD+VDFHYALF + +G+ + SS L GS PV+RLHGNIPQ R+ FK+F + GVL CTDVAARGL+LP V WIVQYDPPTET +YVHRVGRTAR G QG S+LFL+PSE YL+ L +G+ L LSL++T+ A + G R + EV D+Q E+ + KE L L +AF SFVR+YATH +D + IF VR+LH GHVAKSFAL+EPP S K+
Sbjct: 98 SEKIFAANTFESMNMAEKLVNVLKKDASCGGFGFARPTNVQVQTIPSVLKGN--DILVKSETGSGKTLSYLLPIVQKLQSVSPRIQRQDGCMALVLAPTRELCTQIMETANKLIQPFVFLVPGAIIGGEKKKAEKARLRKGITILIATPGRLADHLVNTQSFNYTQLQFLVLDEADRLLDMGFEKQITQILSIL--------DGQKSAKKRQNIL-VSATINSGVQQLAKMSLSNPVLIDADAVT-----------SGEDAATE-----------------IKARSQEK-----------------FSTPHQLMQHFMLVPAKARLCALTCFLREELRHAPRDNKKDGGPGKCKIVVFLSTCDAVDFHYALFRKCAWPSGKGSSEEADSSG-----GNGVASLFGSQGPVFRLHGNIPQQERVTTFKSFCSSSSGVLLCTDVAARGLNLPTVKWIVQYDPPTETRDYVHRVGRTARSGNQGSSLLFLMPSESEYLDYLTKQGLKLNALSLEKTI--ARVGKHGGFLTTSRKKLLHEVVQGDLQFLYEQTLLADKE--------------LFELACQAFHSFVRSYATHSSDTRQIFHVRSLHFGHVAKSFALREPPASAKL 641
BLAST of EWM30350.1 vs. NCBI_GenBank
Match: gi|602636815|ref|XP_007425259.1| (PREDICTED: probable ATP-dependent RNA helicase DDX31 isoform X1 [Python bivittatus]) HSP 1 Score: 395.586 bits (1015), Expect = 4.629e-121 Identity = 237/608 (38.98%), Postives = 327/608 (53.78%), Query Frame = 0
Query: 299 RKISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGREGGSSGQEEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGEMGATDGEGGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFL---RVHAKSHKTVIFCSTCDSVDFHYALFETRLEGNERGADKIGKSSHTLPSEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATP-ARFKGRFRGPEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTSL 902
++I + +FT+ F L LH HLI + + L + T VQ +P LLQ +AL+ S+TGSGKTLAY +P++Q LQ L+P+ R++G A+++ PTREL Q ++ L L++ F WIVPG++ GGEK+KSEKARLRKG+ +LV TPGRL+DH++++Q WL+LDE DR+LDLGFE V I+ + A + Q + SATLT + + D + V VAA P G R G+ +A ++ E F P +L Q ++V KLRL L +F+ K HK ++F S+C+ V+FHY LF E P L S + RLHG++ Q R F+ F Q+ GVL CTDVAARGLDLP V WIVQY+PP AEYVHR+GRTAR G G+S+L LLPSE Y+N L + I ++ + ++ L RFKG G ++ D Q+ RA E E ++S+ + +KA SF+R+YAT+PA+LKPIF VRALHLGHVAKSF L++ P +L
Sbjct: 121 KQIQEEVFTSDSFDQLDLHPHLISTITS-----CLKISSMTSVQKETIPRLLQGK--DALVRSQTGSGKTLAYSIPLVQSLQKLEPKIKRSDGPYALVLVPTRELVLQSFETLQKLLKPFTWIVPGVLMGGEKKKSEKARLRKGINILVATPGRLVDHIKSTQCIHFRCIRWLILDEADRILDLGFEKAVAAILNAVNA-----------ASPKRQNVLLSATLTDGVSRLA----------DISLQDPICVSVAAEPPGS------------------------NPRLGKGYVQEAVDIPSAGEELGSFAVPEKLRQNVVMVPSKLRLVTLAAFIFGKFKFEKRHKMIVFFSSCEQVEFHYVLFRK-------------VLGGEPGGEGVGLSPALPSPLKFARLHGDMKQEERSSVFQAFLQSKTGVLLCTDVAARGLDLPQVTWIVQYNPPNSLAEYVHRIGRTARIGSPGNSLLLLLPSEAEYVNFLASYKINVSEMKMELILSNLMKDDRFKGSQWGSKKTRQGDAQEMHRRATVMQTE----FEDFVHSSTKTIRGAKKALQSFIRSYATYPANLKPIFHVRALHLGHVAKSFGLRDAPGNL 659
BLAST of EWM30350.1 vs. NCBI_GenBank
Match: gi|1004667498|ref|XP_015743047.1| (PREDICTED: probable ATP-dependent RNA helicase DDX31 isoform X2 [Python bivittatus]) HSP 1 Score: 391.349 bits (1004), Expect = 1.894e-119 Identity = 237/608 (38.98%), Postives = 326/608 (53.62%), Query Frame = 0
Query: 299 RKISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGREGGSSGQEEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGEMGATDGEGGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFL---RVHAKSHKTVIFCSTCDSVDFHYALFETRLEGNERGADKIGKSSHTLPSEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATP-ARFKGRFRGPEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTSL 902
++I + +FT+ F L LH HLI + + L + T VQ +P LLQ +AL+ S+TGSGKTLAY +P++Q LQ L+P+ R++G A+++ PTREL Q ++ L L++ F WIVPG++ GGEK+KSEKARLRKG+ +LV TPGRL+DH++++Q WL+LDE DR+LDLGFE V I+ + A + Q + SATLT + + D + V VAA P G R G+ +A ++ E F P +L Q ++V KLRL L +F+ K HK ++F S+C+ V+FHY LF E P L S + RLHG++ Q R F+ F Q+ GVL CTDVAARGLDLP V WIVQY+PP AEYVHR+GRTAR G G+S+L LLPSE Y+N L + I ++ + ++ L RFKG G + D Q+ RA E E ++S+ + +KA SF+R+YAT+PA+LKPIF VRALHLGHVAKSF L++ P +L
Sbjct: 121 KQIQEEVFTSDSFDQLDLHPHLISTITS-----CLKISSMTSVQKETIPRLLQGK--DALVRSQTGSGKTLAYSIPLVQSLQKLEPKIKRSDGPYALVLVPTRELVLQSFETLQKLLKPFTWIVPGVLMGGEKKKSEKARLRKGINILVATPGRLVDHIKSTQCIHFRCIRWLILDEADRILDLGFEKAVAAILNAVNA-----------ASPKRQNVLLSATLTDGVSRLA----------DISLQDPICVSVAAEPPGS------------------------NPRLGKGYVQEAVDIPSAGEELGSFAVPEKLRQNVVMVPSKLRLVTLAAFIFGKFKFEKRHKMIVFFSSCEQVEFHYVLFRK-------------VLGGEPGGEGVGLSPALPSPLKFARLHGDMKQEERSSVFQAFLQSKTGVLLCTDVAARGLDLPQVTWIVQYNPPNSLAEYVHRIGRTARIGSPGNSLLLLLPSEAEYVNFLASYKINVSEMKMELILSNLMKDDRFKGSQWG-SKTRQGDAQEMHRRATVMQTE----FEDFVHSSTKTIRGAKKALQSFIRSYATYPANLKPIFHVRALHLGHVAKSFGLRDAPGNL 658
BLAST of EWM30350.1 vs. NCBI_GenBank
Match: gi|831284086|ref|XP_012673250.1| (PREDICTED: probable ATP-dependent RNA helicase DDX31 [Clupea harengus]) HSP 1 Score: 395.201 bits (1014), Expect = 2.911e-119 Identity = 238/608 (39.14%), Postives = 328/608 (53.95%), Query Frame = 0
Query: 300 KISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGREGGSSGQEEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGEMGATDGEGGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFLRVHAK---SHKTVIFCSTCDSVDFHYALFETRLEGNERGADKIGKSSHTLPSEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTL-FEATPARFKGRFRGPEEVFCLDIQQQL-ERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTSL 902
++ + +FT FS LGLH HL+ L H L + T V LP LL A +A++ S+TGSGKTLAY +PI+Q LQA+ P+ R +G A+IV PTREL+ Q + + LV+ F WIVPG++ GGEKRK+EKARLRKG+ +LV TPGRL+DH+ N+ + + WL+LDE DR LDLGFE + I+ L G R VL SATLT L + + V + V A EGGG++ E ++ + ATP + E ++ F P +L Q +VV KLRL L +F+ K K ++F S+C++V+F L G + AD K T P P + RLHGN+ Q R+ F+ F + GVL CTDVAARGLDLP V WI+QY+PP AEYVHRVGRTAR G +G S+LFL P+E Y+++L N I+++ + L+ L RF+ R R + I+Q+ ERA + E +A + ++A SFVR+Y T+P++LK IF +R LHLGH AKSF L++ P +L
Sbjct: 249 QLKEKVFTTDSFSELGLHPHLVATL-----HKVLNVTSMTSVSKQTLPVLL--AGKDAVVRSQTGSGKTLAYGIPIVQALQAVVPKIKRGDGPLAVIVVPTRELAQQSFQIFQKLVKPFTWIVPGVLMGGEKRKAEKARLRKGINILVSTPGRLVDHINNTLSIVFSSVRWLILDEADRTLDLGFEKDLAVILNALNAGDS----------PRQNVL-LSATLTEGLSRLADICMKNPVSVHVSEDAV--------------SAHVSEGGGKEN---------TEAKQAQ-----ATPVCEAGEQAERFAVPEKLQQHMVVVPSKLRLVCLAAFILDKCKFESGQKLIVFVSSCEAVEFLLTALTAVLCGQQDNADTPKK---TPPKNKNVTPP---KPINFLRLHGNMKQGERMEVFQEFSKCRSGVLLCTDVAARGLDLPQVTWIIQYNPPLSAAEYVHRVGRTARIGTEGSSLLFLTPAEVAYVDILANHNISMSEMKLENILSVLLKDERFRCRGRWDNKKGQAAIEQETRERATVL----QTAFENLVHAGEESVQTAKRALQSFVRSYTTYPSNLKHIFHLRNLHLGHAAKSFGLRDAPNNL 800
BLAST of EWM30350.1 vs. NCBI_GenBank
Match: gi|971519356|dbj|GAQ78913.1| (hypothetical protein KFL_000200660 [Klebsormidium nitens]) HSP 1 Score: 392.504 bits (1007), Expect = 3.932e-119 Identity = 262/641 (40.87%), Postives = 350/641 (54.60%), Query Frame = 0
Query: 285 GATASTSDPASARKRKISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRT-GREGGSSGQEEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGEMGATDGEGGGQDGRPIGGKDDAVEGRKGENLPGDATPNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFL----RVHAKSHKTVIFCSTCDSVDFHYALFETRLEGNERGADKIGKSSHTLPSEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTLFEATPARFKGRFRG---PE-EVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTSLKVGKEVMKISSQRQ 916
GA + S+P SA + ++ +F+A+ F+ LGL + + +E GLG T VQ AA+PA+L +AL+ ++TGSGKTLAYL PI+ L + R +GT A+I+APTREL QI V LV+ FIW+VPG + GGEK+ EKARLRKGVT+LV TPGRLLDHL+++ +FR + +WL+ DE DRLLDLGFE + +I+E L ++G G R Q+ SATL A +D+ L ++ V +D P GA+D G +L D + +SE + F P QL Q Y+ V KLRL L +FL A K V+F STCD+V+FH+ L T E GK + T S PV++LHGN+ Q R F F +A GVL CTDVAARGLD+PAV+ IVQYD P E EYVHRVGRTAR G++G S LFL P+E YL+VL R + + PL+L L E R KGR + PE L ++++LE + +E R L AF SF+R+YA H LK IF V+ LHLGHVA+SFALK+ PT L + + + ++Q
Sbjct: 199 GAKPAKSEPLSA---EAARSVFSASSFAELGLSAPVAQHIEG-----GLGFTAPTHVQKAAIPAMLTGR--DALVKADTGSGKTLAYLAPIVDQLAIRDKKVERHDGTYALILAPTRELCLQITGVAEKLVKRFIWLVPGQIMGGEKKAKEKARLRKGVTILVATPGRLLDHLKSTASFRLDNLQWLIFDEADRLLDLGFEKDIVQILEILDDPSKKGAYRG-----VRRQIALFSATLNARVDRLANLSLANPLK--------VGLDSPNPPA----GASDA------GPQAQDAAGGDADADAFDLEKD-LDDVFASEKDEQFRIPSQLRQFYIKVPWKLRLITLCTFLRAKTAAAAARCKAVVFFSTCDAVEFHHLLLSTFSLQEES-----GKEAGTYVS------------CPVFKLHGNLSQKERSQTFFAFGKAASGVLLCTDVAARGLDIPAVNVIVQYDTPGEAEEYVHRVGRTARLGQEGESFLFLQPNEVDYLDVLARRHVAVQPLALMGILDEIPLDRRKGRAKEALVPEVHPGVLALEKRLEGTLGKQRELR--------------QLATDAFRSFLRSYAAHRGSLKQIFHVKRLHLGHVARSFALKDAPTLLGQSSKKLAMKKEKQ 774
BLAST of EWM30350.1 vs. NCBI_GenBank
Match: gi|567886832|ref|XP_006435938.1| (hypothetical protein CICLE_v10031043mg [Citrus clementina] >gi|557538134|gb|ESR49178.1| hypothetical protein CICLE_v10031043mg [Citrus clementina]) HSP 1 Score: 385.956 bits (990), Expect = 4.221e-119 Identity = 249/649 (38.37%), Postives = 343/649 (52.85%), Query Frame = 0
Query: 296 ARKRKISKHIFTATPFSGLGLHEHLIRVLEAPREHHGLGLRVATRVQSAALPALLQSARPNALICSETGSGKTLAYLLPILQHLQALQPRPSRAEGTRAIIVAPTRELSHQIYDVLSLLVRAFIWIVPGLVSGGEKRKSEKARLRKGVTVLVGTPGRLLDHLQNSQAFRHEATEWLVLDEVDRLLDLGFEAQVREIVEKLRTGREGGSSGQ--EEARARVQVLAASATLTAALDKFGCELLGQHVRIDAKTGTVVDVDVAATPGGGEMGATDGEGGGQDGRPIGGKDDAVEGRKGENLPGDAT-----PNATSSEMSDHFTTPVQLIQQYMVVTCKLRLPALISFLRVHA----KSHKTVIFCSTCDSVDFHYALFETRLEGNERGADKIGKSSHTLPSEDAAEQPLLGSDMPVYRLHGNIPQAARLLAFKTFRQAPRGVLFCTDVAARGLDLPAVDWIVQYDPPTETAEYVHRVGRTARRGRQGHSILFLLPSEQGYLNVLKNRGITLTPLSLQQTL----FEATPARFKGRFRGPEEVFCLDIQQQLERAVATAKEERGMNERKGNASSPLLALGRKAFGSFVRAYATHPADLKPIFAVRALHLGHVAKSFALKEPPTSLKVGKEVMKISSQRQ-SASEHDQNGKSK 928
++K++ K IF + FS LGLH L L RE LG T+VQ+ A+P +L S R + L+ + TG+GKT+AYL PI+ HLQ+ PR R+ GT A+++ PTREL Q+Y++L L+ F WIVPG V GGE R EKARLRKG+++LV TPGRLLDHL+++ +F H W++ DE DR+L+LGF ++ EI++ L + R GS G+ E + + Q L SATL ++ +I +T ++ +D P +D R G +L D P+ T ++ F P QL+Q+Y+ V C RL L+S L+ H S K V+F STCD+VDFHY+L + S H+ P + + L +RLHGN+ Q R+ F F+ + +L TDVAARGLD P V I+QYD E EYVHRVGRTAR G +G S+LFL P E YL L+ G++LT L + L R K + L +Q LE + S + L + AF S+VRAY H +LK IF ++ LHLGHVAKSFALKE P+ VGK K S +R+ + Q+GK K
Sbjct: 2 SKKKETVKEIFASCSFSSLGLHSTLCDQL---RER--LGFEAPTKVQAQAIPVIL-SGR-HVLVNAATGTGKTVAYLAPIINHLQSYSPRIDRSSGTFALVLVPTRELCLQVYEILHKLLHRFHWIVPGYVMGGENRSKEKARLRKGISILVATPGRLLDHLKHTSSFLHTNLCWIIFDEADRILELGFGKEIEEILDILGS-RNIGSIGEGNEVSNVKRQNLLLSATLNEKVNHLA--------KISLETPVLIGLDEKKLP-----------------------EDKSHVRFG-SLESDVKEEVEHPSTTMRSTTEDFKLPAQLVQRYVKVPCGSRLAVLLSILK-HLFDTEVSQKLVVFFSTCDAVDFHYSLL-----------SEFQWSPHSQPDMELKQ---LFLRCKTFRLHGNMKQEDRITTFGAFKIEKKALLLSTDVAARGLDFPKVKCIIQYDSAGEATEYVHRVGRTARLGERGDSLLFLQPVEMDYLQDLEKHGVSLTEYPLLKVLDSFPLYGQKPRVKKFLTTESHPWILSLQNALESFII--------------HESKMKKLAKDAFCSWVRAYTAHRGELKRIFTLKKLHLGHVAKSFALKEQPSL--VGKSFQKQSKKRKRDQRQKGQSGKRK 579 The following BLAST results are available for this feature:
BLAST of EWM30350.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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