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Properties
| Property Name | Value |
|---|
| Product | g patch domain-containing protein 1 |
| Orig transcript id | gnl|cribi|Naga_100025g20.7496.mrna |
| Orig protein id | gnl|cribi|Naga_100025g20.7496 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:659834..663095 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4469 ID=rna4469|Name=rna4469|organism=Nannochloropsis gaditana|type=mRNA|length=1623bp
AGTTGCCTGCGGCAAAACTACTAGTAGACGGTAAAGCACATCATTTCATC
CTTTTGCTCAATGCCGATGCTTGCGGGACATCACTTTTCTTTTCCCTTTT
GTACCGAACCAAAAAATTCTTCTTCGACGTTGTACCGTAAAGCATAATGC
CATCGTGGCGTGCTTCTTTCTTTCACAGGGGCAATAACCTCCCCACCCTC
TCCTGCTTTGCTGTTGTTAATTCTTTTACAGGAATACTTGCACACCGCAA
ATTGATATTATAACATCCATGATAGTCTGATAGTCTTTTGTTTCTACATT
GTTCAAGGTATGCCTGTGAGAAATCGCTCCGCGGCGTCCATTACAGCGAT
TGCCGTGCTTGCTCTAGTAGGAGCTCTGTACCTTCGTCGTCAGGCACTCA
AAAAGAAAAAACAAGAAGCGGAGAACGCGTCAGAAGACAAATCCCACGCC
ACGCCACATTATCAAATCTCGATTCTTGGGGATACCTTTTGCGATGTCGT
GGTTCAAGGCATCAAAAATTTGCCCGAATGGGGAACAGACGCTCTGACCG
ACGCCCCAATAGAACTGACTCCGGGGGGCTCTGCCTGCAACTCCGCGCTG
CAACTCGCCAGCTTGCTGCGCTTATTTCCTCTAGAATCCTATATTACACC
CCAGGTGGTGTTGCACACAGCTTTAGGAGACGACTCATTTGGATCCTTCT
TGAGGGAAAAAATTAAGGCCGCGGTGCAAGGCCAATATGTACGGATTTCC
ACCTCCTCATCCCTCGAAGAAGCTTCCAGGAAAGAGTCGTCTGGATCCAT
GCCCAACAAAGAAACCGCAAATGCAACAACGGGTGTGTGTATTTGCCTCT
CCGGGTCTGAGGACCGTGCGTTCATTACCCATCGGGGAGTCGTCGCCACC
TTCAGTGGCGATCAACTCGACGTCTCCACCATCTACAGGAGCCAATTCAT
ACACATTGCCGGCTACTACAACTGTCCATCGCTCTGGCGTATTCTGCCAG
GGCTGCTACGTGATTGTCAGTCACGAGGCATTTTTACAAGCCTCAGCCCG
CAGTGCGACGCGTCGGGCAAGTGGGAGGGTGGCCTCCATGACACGTTACC
CCACCTGGATTTATTTGTGCCCAACGAGATGGAGGCTTTGGCAATCTCCA
GACAAAATGGGATTGTGGACGCATGTCGCTACTTTGTAGAGAGTGGGGTG
AAACATGTAATCGTCACGTTGGGGGCGGAGGGAGCTTTCGCATCTGTGAA
GGAAGGGGAGAGGCGCCGCGAAATGAGGCAGACATGTCCGCTCAAAGAAA
TTGTAGATACCACAGGCGCAGGGGACGCTTTTAATGCAGGAGTCTTGTAC
AGCCTTTTGACGGATTTGGTGGGAAAAAACGCGGCCCCGGGGAACGGGAC
AACGGAGTCGTGGGAATGGGGACAGGCCTTGCGGATGGGATGCGCCATGG
GCGGCCACAATGTGACCAAAGCGGGCGCGTCGGCGCCTCCGCGGGATCAA
CTGGAAATAATTGACAATTTGAAGGAAATTAGGTGTGATGTATAGTTTTT
CCACGCGGCGGACTTCATCATTGGTAATAAAAATCGAAGTCATCTAGAGC
AAGCGTCCCGACAATGTCAGACT back to topprotein sequence of rna4469 >rna4469-protein ID=rna4469-protein|Name=rna4469|organism=Nannochloropsis gaditana|type=polypeptide|length=978bp
MSAYRGKTQKDEVRDEEGRRRFHGAFTGGFSAGYYNSVGSQEGWQPSTFK
SSRDNRASSRPSRQRPEDFMDEEDGLLGRDLHTQLPYDTLGVSSKQLLRK
EVEKEAVGSSIPGLGMVDELLVPTEVAIGKKLLQMMGWKEGVGVGSRQRR
PRKKRGKDSGEGEAGVEEAVDDDVAFLPEHLRDDSTLVQQGKITFARPTL
GLTLLPRPKNDRHGLGFDPEKDAPELAAFRRQGPNDWGGEDDSRGVYRMG
DVLGKDTSSRAGRRNASGFALDEDEDDVYDQVTERAGQGERGGREGGATG
KEGGRESMYLSTLGEPDDEEEESRSGQASTLMAGAAKRVALEAWISGGGG
GGRGAEIPGAVGLRCPTDSRPVLEGFVLGVKDLGYQPPAWPLPTPPRGFV
PYHSFETEQGGVEGRGEDHAGTVRRHRDANQGRLRAETRGGLLGEAPVQA
AAGTSSIFDLMSEADRARIETFKTQGAPALAHAAASEAAESPSASFPPVP
SAFQGMQGALAKRFSVAEKPATTGPTLPEGLTEGGKGAGGIAPSVALAGP
ALPKVKTIPAPARSQVLFQPVSLLCKRFNVSVPGHARLTPAISLGGQPPS
ARPAYALPRAFGGGRAEALKPPPVPLGPGKGKAGPVSLLSNKFDREMEAL
LPGENLVVPDVMLEDKLAEGEIEEEGRGGGSLPAFEQKPRPSKDLFKAIF
EAPSSSESEEESEEEEEPEEERKEEGEKMQGQASEGILGAQTGDALNAST
AGDASTNSHSSTARDHFLQPAQVAGLEAMEDLLAKGPMLLSKKRKALKED
ETVDGGDEEEEEEGLVFGSGVLKKPKLKSQKGAAGNKSEANNAALPLETH
PSQQAQKCVLPTSRSGDLQTSAVGLVEGPSDERGRGKSRWDDPKLSPASY
ESDRRNGSDDSDESSDDSVGLSSSSAGSTMDGRERRARRSRQDSKAKVRS
KDRKKHSKKRRRSHSSKKDKKKRHRRQK back to topmRNA from alignment at CM002463.1:659834..663095+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4469 ID=rna4469|Name=rna4469|organism=Nannochloropsis gaditana|type=mRNA|length=3262bp|location=Sequence derived from alignment at CM002463.1:659834..663095+ (Nannochloropsis gaditana)
GCATCGGCATTGAGCAAAAGGATGAAATGATGTGCTTTACCGTCTACTAG
TAGTTTTGCCGCAGGCAACTGGAAGACCTGCTCTCGCCGTACACGCGCCC
CTCTCATTACCTGAAAAGCACAAGCATCGCAAAACCAAAATGTAGTTGTC
AAACCCAGCTCACTAGTTACCTTATCTTCTAACTTCCTCTGTCTATCAGC
TTTCAACAGGCACAGGCTTAACAACTCTCGTTGGTCGTTTTCCTatgcct
ctcttcctccgaagAACTGCATTCCTCTTCTCAATCCAGAAATGAGTGCC
TACCGGGGCAAAACTCAAAAAGACGAAGTTcgcgacgaggaagggagacg
tAGATTCCACGGGGCTTTTACTGGGGGTTTCTCTGCAGGCTATTACAACA
GCGTAGGCAGTCAGGAGGGATGGCAACCATCTACGTTCAAGTCCTCTCGG
GACAACCGTGCGTCAAGCCGCCCCTCCAGGCAGCGTCCCGAAGACTTCAt
ggacgaagaagatggcTTGTTGGGACGGGATTTGCATACACAGTTGCCAT
ACGATACGTTGGGAGTATCGTCCAAGCAGCTCTTGCggaaggaggtagaa
aaagaggcggtcGGGAGCAGCATTCCGGGCCTGGGTATGGTCGATGAACT
GCTCGTCCCGACAGAGGTGGCGATTGGGAAGAAATTACTTCAGATgatgg
gatggaaggagggagtgggagtgGGCTCACGACAGCGGCGGCCCCGGAAG
AAGCGAGGCAAGGActcgggggaaggggaggcaggggtggaggaggcggt
ggacgacgACGTGGCCTTCTTGCCCGAGCATTTGCGAGACGATTCCACCC
TCGTTCAGCAGGGGAAAATCACATTTGCCCGGCCCACGCTAGGCTTGACG
CTCCTCCCCAGGCCTAAGAATGACCGCCATGGGCTAGGGTTCGATCCCGA
GAAAGATGCTCCGGAGTTGGCGGCCTTCCGGAGGCAGGGCCCGAATGAct
ggggcggggaagacgacaGTCGAGGGGTTTACCGGATGGGAGATGTATTG
GGAAAGGATACGTCGTCtagggcgggacggaggaacgCTTCGGGTTTCGC
CTTggacgaagatgaggatgacGTGTACGACCAGGTgacggagagggcgg
ggcagggcgagaggggaggaagagagggaggggcgacgggaaaggaagga
gggagggagagcatgTATTTGAGCACCTTGGGCGAGCctgacgacgaaga
ggaagagagtcGCTCGGGCCAGGCCTCTACCCTGATGGCCGGGGCAGCGA
AGCGGGTGGCGCTGGAGGCTTGGatctcgggggggggggggggcggaaga
ggtgCGGAGATTCCGGGGGCCGTGGGGCTCCGATGTCCCACTGACTCGCG
ACCGGTGCTGGAAGGTTTTGTCTTGGGCGTGAAGGACTTGGGATATCAGC
CCCCCGCCTGGCCCCTGCCCACGCCCCCTCGCGGATTCGTCCCTTATCAC
AGCTTCGAGaccgagcagggaggggtggaggggcggggagaggaccaCGC
CGGCACAGTCAGGCGTCACCGCGATGCCAACCAAGGACGGCTGCGGGCCG
AGACCCGGGGCGGCTTGCTGGGAGAGGCCCCAGTCCAAGCGGCCGCCGGg
acttcctccattttcgaCCTCATGTCAGAGGCAGACCGGGCGCGGATCGA
GACGTTCAAGACCCAAGGCGCGCCGGCCCTGGCGCACGCAGCGGCCTCAG
AGGCGGCGGAATCCCCGTCGGCCTCGTTTCCCCCTGtgccctccgctttc
caGGGCATGCAAGGGGCTCTGGCCAAGCGGTTTAGTGTGGCTGAGAAGCC
CGCGACTACCGGGCCGACTCTACCGGAGGGGttgacggagggagggaagg
gtgcaGGAGGTATCGCCCCCTCTGTCGCGCTTGCTGGCCCCGCTCTGCCC
AAGGTGAAAACAATCCCAGCGCCCGCCCGCAGCCAGGTCCTCTTCCAGCC
CGTCTCCCTGCTTTGCAAGCGCTTCAACGTGTCAGTGCCGGGGCATGCCA
GGCTGACTCCGGCCATCAGTCTAGGTGGACAGCCCCCGTCCGCGCGACCG
GCTTACGCCCTGCCTCGGGCctttggaggcgggagagcggaAGCGCTGAA
GCCACCACCTGTGCCGTTGGGtccagggaaggggaaggcgggaccCGTCT
CCCTGTTGAGCAATAAGTTCGACCGGGAAATGGAGGCGCTCTTGCCTGGG
GAAAACTTGGTCGTGCCTGACGTCATGCTAGAGGATAAgttggcggaggg
cgagatagaggaggaaggaaggggaggaggaagcttgcCAGCCTTCGAAC
AGAAACCTCGACCCAGTAAAGACTTGTTCAAGGCTATATTTGAGGCGCCA
TCGTCCtcggagagcgaggaggagagtgaggaggaggaagaaccggaaga
ggagagaaaggaggagggggaaaagatgcaAGGGCAGGCGTCAGAAGGGA
TACTTGGTGCTCAGACAGGAGATGCGCTTAACGCTTCGACGGCGGGCGAT
GCCAGCACCAATTCTCATTCATCTACAGCACGAGACCACTTCTTACAACC
TGCCCAGGTGGCGGggttggaggcgatggaggatCTCCTTGCCAAAGGGC
CCATGCTGCTGAgtaagaagaggaaggcgctcaaggaggacgaaacggtg
gatggcggcgacgaggaagaggaagaggaaggtttAGTGTTCGGTTCAGG
GGTGTTGAAGAAGCCAAAGCTGAAATCACAAAAAGGTGCGGCTGGGAATA
AAAGCGAAGCAAATAACGCCGCACTACCACTGGAAACACATCCGTCACAG
CAGGCACAAAAATGTGTGCTGCCTACCTCACGGTCTGGGGACCTCCAGAC
GAGTGCGGTTGGGTTGGTCGAAGGACCAAGTGATGAgcgcggaagaggaa
aaagccggTGGGATGATCCAAAGCTGAGCCCTGCAAGTTACGAAAGTGAC
AGGAGGAATGGCAGTGATGACAGCGACGAAAGCAGTGACGACAGCGTCGG
CCTCAGTAGCAGCAGCGCTGGGAGCACGATGGATGGCCGGGAGAGACGGG
CCAGAAGAAGCCGGCAGGATTCGAAGGCGAAAGTGAGGTCCAAGGACCGT
AAGAAGCACagcaaaaagaggagacgCAGCCATAGCAGCAAAAAAGACAA
GAAAAAGCGGCATCGGCGCCAAAAGTAAACTTGTAATTGAAATAAATTTA
TATCCGAAATGT back to topCoding sequence (CDS) from alignment at CM002463.1:659834..663095+ >rna4469 ID=rna4469|Name=rna4469|organism=Nannochloropsis gaditana|type=CDS|length=2937bp|location=Sequence derived from alignment at CM002463.1:659834..663095+ (Nannochloropsis gaditana)
ATGAGTGCCTACCGGGGCAAAACTCAAAAAGACGAAGTTcgcgacgagga
agggagacgtAGATTCCACGGGGCTTTTACTGGGGGTTTCTCTGCAGGCT
ATTACAACAGCGTAGGCAGTCAGGAGGGATGGCAACCATCTACGTTCAAG
TCCTCTCGGGACAACCGTGCGTCAAGCCGCCCCTCCAGGCAGCGTCCCGA
AGACTTCAtggacgaagaagatggcTTGTTGGGACGGGATTTGCATACAC
AGTTGCCATACGATACGTTGGGAGTATCGTCCAAGCAGCTCTTGCggaag
gaggtagaaaaagaggcggtcGGGAGCAGCATTCCGGGCCTGGGTATGGT
CGATGAACTGCTCGTCCCGACAGAGGTGGCGATTGGGAAGAAATTACTTC
AGATgatgggatggaaggagggagtgggagtgGGCTCACGACAGCGGCGG
CCCCGGAAGAAGCGAGGCAAGGActcgggggaaggggaggcaggggtgga
ggaggcggtggacgacgACGTGGCCTTCTTGCCCGAGCATTTGCGAGACG
ATTCCACCCTCGTTCAGCAGGGGAAAATCACATTTGCCCGGCCCACGCTA
GGCTTGACGCTCCTCCCCAGGCCTAAGAATGACCGCCATGGGCTAGGGTT
CGATCCCGAGAAAGATGCTCCGGAGTTGGCGGCCTTCCGGAGGCAGGGCC
CGAATGActggggcggggaagacgacaGTCGAGGGGTTTACCGGATGGGA
GATGTATTGGGAAAGGATACGTCGTCtagggcgggacggaggaacgCTTC
GGGTTTCGCCTTggacgaagatgaggatgacGTGTACGACCAGGTgacgg
agagggcggggcagggcgagaggggaggaagagagggaggggcgacggga
aaggaaggagggagggagagcatgTATTTGAGCACCTTGGGCGAGCctga
cgacgaagaggaagagagtcGCTCGGGCCAGGCCTCTACCCTGATGGCCG
GGGCAGCGAAGCGGGTGGCGCTGGAGGCTTGGatctcggggggggggggg
ggcggaagaggtgCGGAGATTCCGGGGGCCGTGGGGCTCCGATGTCCCAC
TGACTCGCGACCGGTGCTGGAAGGTTTTGTCTTGGGCGTGAAGGACTTGG
GATATCAGCCCCCCGCCTGGCCCCTGCCCACGCCCCCTCGCGGATTCGTC
CCTTATCACAGCTTCGAGaccgagcagggaggggtggaggggcggggaga
ggaccaCGCCGGCACAGTCAGGCGTCACCGCGATGCCAACCAAGGACGGC
TGCGGGCCGAGACCCGGGGCGGCTTGCTGGGAGAGGCCCCAGTCCAAGCG
GCCGCCGGgacttcctccattttcgaCCTCATGTCAGAGGCAGACCGGGC
GCGGATCGAGACGTTCAAGACCCAAGGCGCGCCGGCCCTGGCGCACGCAG
CGGCCTCAGAGGCGGCGGAATCCCCGTCGGCCTCGTTTCCCCCTGtgccc
tccgctttccaGGGCATGCAAGGGGCTCTGGCCAAGCGGTTTAGTGTGGC
TGAGAAGCCCGCGACTACCGGGCCGACTCTACCGGAGGGGttgacggagg
gagggaagggtgcaGGAGGTATCGCCCCCTCTGTCGCGCTTGCTGGCCCC
GCTCTGCCCAAGGTGAAAACAATCCCAGCGCCCGCCCGCAGCCAGGTCCT
CTTCCAGCCCGTCTCCCTGCTTTGCAAGCGCTTCAACGTGTCAGTGCCGG
GGCATGCCAGGCTGACTCCGGCCATCAGTCTAGGTGGACAGCCCCCGTCC
GCGCGACCGGCTTACGCCCTGCCTCGGGCctttggaggcgggagagcgga
AGCGCTGAAGCCACCACCTGTGCCGTTGGGtccagggaaggggaaggcgg
gaccCGTCTCCCTGTTGAGCAATAAGTTCGACCGGGAAATGGAGGCGCTC
TTGCCTGGGGAAAACTTGGTCGTGCCTGACGTCATGCTAGAGGATAAgtt
ggcggagggcgagatagaggaggaaggaaggggaggaggaagcttgcCAG
CCTTCGAACAGAAACCTCGACCCAGTAAAGACTTGTTCAAGGCTATATTT
GAGGCGCCATCGTCCtcggagagcgaggaggagagtgaggaggaggaaga
accggaagaggagagaaaggaggagggggaaaagatgcaAGGGCAGGCGT
CAGAAGGGATACTTGGTGCTCAGACAGGAGATGCGCTTAACGCTTCGACG
GCGGGCGATGCCAGCACCAATTCTCATTCATCTACAGCACGAGACCACTT
CTTACAACCTGCCCAGGTGGCGGggttggaggcgatggaggatCTCCTTG
CCAAAGGGCCCATGCTGCTGAgtaagaagaggaaggcgctcaaggaggac
gaaacggtggatggcggcgacgaggaagaggaagaggaaggtttAGTGTT
CGGTTCAGGGGTGTTGAAGAAGCCAAAGCTGAAATCACAAAAAGGTGCGG
CTGGGAATAAAAGCGAAGCAAATAACGCCGCACTACCACTGGAAACACAT
CCGTCACAGCAGGCACAAAAATGTGTGCTGCCTACCTCACGGTCTGGGGA
CCTCCAGACGAGTGCGGTTGGGTTGGTCGAAGGACCAAGTGATGAgcgcg
gaagaggaaaaagccggTGGGATGATCCAAAGCTGAGCCCTGCAAGTTAC
GAAAGTGACAGGAGGAATGGCAGTGATGACAGCGACGAAAGCAGTGACGA
CAGCGTCGGCCTCAGTAGCAGCAGCGCTGGGAGCACGATGGATGGCCGGG
AGAGACGGGCCAGAAGAAGCCGGCAGGATTCGAAGGCGAAAGTGAGGTCC
AAGGACCGTAAGAAGCACagcaaaaagaggagacgCAGCCATAGCAGCAA
AAAAGACAAGAAAAAGCGGCATCGGCGCCAAAAGTAA back to top
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