EWM26205.1, cds4458 (CDS) Nannochloropsis gaditana

Overview
NameEWM26205.1
Unique Namecds4458
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:660125..663061 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26205.1
Productg patch domain-containing protein 1
Orig transcript idgnl|cribi|Naga_100025g20.7496.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:660125..663061 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR000467G_patch_dom
IPR011666DUF1604
Homology
BLAST of EWM26205.1 vs. NCBI_GenBank
Match: gi|585108204|gb|EWM26205.1| (g patch domain-containing protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 1949.48 bits (5049), Expect = 0.000e+0
Identity = 978/978 (100.00%), Postives = 978/978 (100.00%), Query Frame = 0
Query:    1 MSAYRGKTQKDEVRDEEGRRRFHGAFTGGFSAGYYNSVGSQEGWQPSTFKSSRDNRASSRPSRQRPEDFMDEEDGLLGRDLHTQLPYDTLGVSSKQLLRKEVEKEAVGSSIPGLGMVDELLVPTEVAIGKKLLQMMGWKEGVGVGSRQRRPRKKRGKDSGEGEAGVEEAVDDDVAFLPEHLRDDSTLVQQGKITFARPTLGLTLLPRPKNDRHGLGFDPEKDAPELAAFRRQGPNDWGGEDDSRGVYRMGDVLGKDTSSRAGRRNASGFALDEDEDDVYDQVTERAGQGERGGREGGATGKEGGRESMYLSTLGEPDDEEEESRSGQASTLMAGAAKRVALEAWISGGGGGGRGAEIPGAVGLRCPTDSRPVLEGFVLGVKDLGYQPPAWPLPTPPRGFVPYHSFETEQGGVEGRGEDHAGTVRRHRDANQGRLRAETRGGLLGEAPVQAAAGTSSIFDLMSEADRARIETFKTQGAPALAHAAASEAAESPSASFPPVPSAFQGMQGALAKRFSVAEKPATTGPTLPEGLTEGGKGAGGIAPSVALAGPALPKVKTIPAPARSQVLFQPVSLLCKRFNVSVPGHARLTPAISLGGQPPSARPAYALPRAFGGGRAEALKPPPVPLGPGKGKAGPVSLLSNKFDREMEALLPGENLVVPDVMLEDKLAEGEIEEEGRGGGSLPAFEQKPRPSKDLFKAIFEAPSSSESEEESEEEEEPEEERKEEGEKMQGQASEGILGAQTGDALNASTAGDASTNSHSSTARDHFLQPAQVAGLEAMEDLLAKGPMLLSKKRKALKEDETVDGGDEEEEEEGLVFGSGVLKKPKLKSQKGAAGNKSEANNAALPLETHPSQQAQKCVLPTSRSGDLQTSAVGLVEGPSDERGRGKSRWDDPKLSPASYESDRRNGSDDSDESSDDSVGLSSSSAGSTMDGRERRARRSRQDSKAKVRSKDRKKHSKKRRRSHSSKKDKKKRHRRQK 978
            MSAYRGKTQKDEVRDEEGRRRFHGAFTGGFSAGYYNSVGSQEGWQPSTFKSSRDNRASSRPSRQRPEDFMDEEDGLLGRDLHTQLPYDTLGVSSKQLLRKEVEKEAVGSSIPGLGMVDELLVPTEVAIGKKLLQMMGWKEGVGVGSRQRRPRKKRGKDSGEGEAGVEEAVDDDVAFLPEHLRDDSTLVQQGKITFARPTLGLTLLPRPKNDRHGLGFDPEKDAPELAAFRRQGPNDWGGEDDSRGVYRMGDVLGKDTSSRAGRRNASGFALDEDEDDVYDQVTERAGQGERGGREGGATGKEGGRESMYLSTLGEPDDEEEESRSGQASTLMAGAAKRVALEAWISGGGGGGRGAEIPGAVGLRCPTDSRPVLEGFVLGVKDLGYQPPAWPLPTPPRGFVPYHSFETEQGGVEGRGEDHAGTVRRHRDANQGRLRAETRGGLLGEAPVQAAAGTSSIFDLMSEADRARIETFKTQGAPALAHAAASEAAESPSASFPPVPSAFQGMQGALAKRFSVAEKPATTGPTLPEGLTEGGKGAGGIAPSVALAGPALPKVKTIPAPARSQVLFQPVSLLCKRFNVSVPGHARLTPAISLGGQPPSARPAYALPRAFGGGRAEALKPPPVPLGPGKGKAGPVSLLSNKFDREMEALLPGENLVVPDVMLEDKLAEGEIEEEGRGGGSLPAFEQKPRPSKDLFKAIFEAPSSSESEEESEEEEEPEEERKEEGEKMQGQASEGILGAQTGDALNASTAGDASTNSHSSTARDHFLQPAQVAGLEAMEDLLAKGPMLLSKKRKALKEDETVDGGDEEEEEEGLVFGSGVLKKPKLKSQKGAAGNKSEANNAALPLETHPSQQAQKCVLPTSRSGDLQTSAVGLVEGPSDERGRGKSRWDDPKLSPASYESDRRNGSDDSDESSDDSVGLSSSSAGSTMDGRERRARRSRQDSKAKVRSKDRKKHSKKRRRSHSSKKDKKKRHRRQK
Sbjct:    1 MSAYRGKTQKDEVRDEEGRRRFHGAFTGGFSAGYYNSVGSQEGWQPSTFKSSRDNRASSRPSRQRPEDFMDEEDGLLGRDLHTQLPYDTLGVSSKQLLRKEVEKEAVGSSIPGLGMVDELLVPTEVAIGKKLLQMMGWKEGVGVGSRQRRPRKKRGKDSGEGEAGVEEAVDDDVAFLPEHLRDDSTLVQQGKITFARPTLGLTLLPRPKNDRHGLGFDPEKDAPELAAFRRQGPNDWGGEDDSRGVYRMGDVLGKDTSSRAGRRNASGFALDEDEDDVYDQVTERAGQGERGGREGGATGKEGGRESMYLSTLGEPDDEEEESRSGQASTLMAGAAKRVALEAWISGGGGGGRGAEIPGAVGLRCPTDSRPVLEGFVLGVKDLGYQPPAWPLPTPPRGFVPYHSFETEQGGVEGRGEDHAGTVRRHRDANQGRLRAETRGGLLGEAPVQAAAGTSSIFDLMSEADRARIETFKTQGAPALAHAAASEAAESPSASFPPVPSAFQGMQGALAKRFSVAEKPATTGPTLPEGLTEGGKGAGGIAPSVALAGPALPKVKTIPAPARSQVLFQPVSLLCKRFNVSVPGHARLTPAISLGGQPPSARPAYALPRAFGGGRAEALKPPPVPLGPGKGKAGPVSLLSNKFDREMEALLPGENLVVPDVMLEDKLAEGEIEEEGRGGGSLPAFEQKPRPSKDLFKAIFEAPSSSESEEESEEEEEPEEERKEEGEKMQGQASEGILGAQTGDALNASTAGDASTNSHSSTARDHFLQPAQVAGLEAMEDLLAKGPMLLSKKRKALKEDETVDGGDEEEEEEGLVFGSGVLKKPKLKSQKGAAGNKSEANNAALPLETHPSQQAQKCVLPTSRSGDLQTSAVGLVEGPSDERGRGKSRWDDPKLSPASYESDRRNGSDDSDESSDDSVGLSSSSAGSTMDGRERRARRSRQDSKAKVRSKDRKKHSKKRRRSHSSKKDKKKRHRRQK 978          
BLAST of EWM26205.1 vs. NCBI_GenBank
Match: gi|553192060|ref|XP_005855507.1| (g patch domain-containing protein 1, partial [Nannochloropsis gaditana CCMP526] >gi|422293554|gb|EKU20854.1| g patch domain-containing protein 1, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 577.4 bits (1487), Expect = 0.000e+0
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0
Query:    1 MSAYRGKTQKDEVRDEEGRRRFHGAFTGGFSAGYYNSVGSQEGWQPSTFKSSRDNRASSRPSRQRPEDFMDEEDGLLGRDLHTQLPYDTLGVSSKQLLRKEVEKEAVGSSIPGLGMVDELLVPTEVAIGKKLLQMMGWKEGVGVGSRQRRPRKKRGKDSGEGEAGVEEAVDDDVAFLPEHLRDDSTLVQQGKITFARPTLGLTLLPRPKNDRHGLGFDPEKDAPELAAFRRQGPNDWGGEDDSRGVYRMGDVLGKDTSSRAGRRNASGFALDEDEDDVYDQVT 283
            MSAYRGKTQKDEVRDEEGRRRFHGAFTGGFSAGYYNSVGSQEGWQPSTFKSSRDNRASSRPSRQRPEDFMDEEDGLLGRDLHTQLPYDTLGVSSKQLLRKEVEKEAVGSSIPGLGMVDELLVPTEVAIGKKLLQMMGWKEGVGVGSRQRRPRKKRGKDSGEGEAGVEEAVDDDVAFLPEHLRDDSTLVQQGKITFARPTLGLTLLPRPKNDRHGLGFDPEKDAPELAAFRRQGPNDWGGEDDSRGVYRMGDVLGKDTSSRAGRRNASGFALDEDEDDVYDQVT
Sbjct:    9 MSAYRGKTQKDEVRDEEGRRRFHGAFTGGFSAGYYNSVGSQEGWQPSTFKSSRDNRASSRPSRQRPEDFMDEEDGLLGRDLHTQLPYDTLGVSSKQLLRKEVEKEAVGSSIPGLGMVDELLVPTEVAIGKKLLQMMGWKEGVGVGSRQRRPRKKRGKDSGEGEAGVEEAVDDDVAFLPEHLRDDSTLVQQGKITFARPTLGLTLLPRPKNDRHGLGFDPEKDAPELAAFRRQGPNDWGGEDDSRGVYRMGDVLGKDTSSRAGRRNASGFALDEDEDDVYDQVT 291          
BLAST of EWM26205.1 vs. NCBI_GenBank
Match: gi|568036787|gb|ETM34389.1| (hypothetical protein, variant [Phytophthora parasitica])

HSP 1 Score: 209.534 bits (532), Expect = 4.504e-53
Identity = 193/602 (32.06%), Postives = 279/602 (46.35%), Query Frame = 0
Query:    5 RGKTQKDEVRDEEGRRRFHGAFTGGFSAGYYNSVGSQEGWQPSTFKSSRDNRASSRPSRQRPEDFMDEEDG-LLGRDLHTQLPYDTLGVSSKQLLRKEVEKEAVGSSIPGLGMVDELLVPTEVAIGKKLLQMMGWKEGVGVGSRQRRPRKKRGKDSGEGEAGVEEAVDDDVAFLPEHLRDDSTLVQQGKITFARPTLGLTLLPRPKNDRHGLGFDPEKDAPELAAFRRQGPNDWGGEDDSRGVYRMGDVLGKDTSSRAGRRNASGF---ALDEDED-DVYDQVTERAGQGERGGREGGATGKEGGRESMYLSTLGEPDDEEEESRSGQASTLMAGAAKRVALEAWISGGGGGGRGAEIPGAVGLRCPTDSRPVLEGFVLGVKDLGYQPP--AWPLPTPPRGFVPYHSFETEQGGVE---------GRGEDHAG---TVRRHRDANQGRLRAETRGGLLGEAPVQAAAGTSSIFDLMSEADRARIETFKTQGAPALAHAAASEAAESPSAS---FPPVPSAFQGMQGALAKRFSVAEKPATTGPTLPEGLTEGGKGAGGIAPSVALAGPALPKVKTIPAPARSQVLFQPVSLLCKRFNVSVPG 584
            RG  +  EV D +GRRRFHGAFTGGFSAGYYNSVGS+EGW P TF SS    + S    QRPEDFMDEED  LLG+ L T   YDTL   +K+ L+++ ++    +SIPG  + ++ ++P   +IG KLL+ MGWKEG G+G R RR + +  KD+ + +   ++A +D     P+   ++   V   K+   +        P+PK DR+G GFDP  DAPE + +++Q       E   R V    D L    S+    R  +G+   AL+E++D DVY                G  +  E  R    ++ LG   D +    S Q S                       R  E  G     C +D RPVL GF L       +PP       T P  F  YH FE ++   +             D+ G      R R A     + +T G   G   V+++  T S+FDL+ +  +A++     Q    +  ++A  A    SA+     P+ S   G Q       S+A++  ++  T+ E +++          SV++  P   K +      RSQ L+ P SLLCKRF+V   G
Sbjct:    3 RGSIRNQEVTDAQGRRRFHGAFTGGFSAGYYNSVGSEEGWTPKTFSSS--RSSRSSRVEQRPEDFMDEEDDPLLGKRLETTERYDTLQTGAKRQLQQQPDR--TEASIPGFSLPEDWVLPVNDSIGAKLLKQMGWKEGHGIGQRVRRRKYQDEKDTEQPKLLTQDAREDKTKTEPQD--EEEVYVPPRKVFDVQKA-----FPKPKLDRYGAGFDPYSDAPEFSMYKQQQERKQ-KEGSHRQVVSFLDAL---KSTDGSNRATTGYGLSALEENDDIDVY----------------GTVSMAEFDR---VIAPLGTRKDVKRLDSSAQES-----------------------RRYEKLGHSRALC-SDGRPVLPGFELAAS--KEKPPKAVNVHLTVPSDFKAYHRFEDDEDQSDTVTALYRKYNFSTDNMGNRMVTARQRAALLEDDKKDTHGATAGAGEVKSS--TRSVFDLLGDEQKAKLFDAAAQAKQGVPLSSAKRATTDVSAAPRVRQPLVSGSTGDQFRATISASIAKRFVSSKSTVDEEISD----------SVSVEEPQTKKSR------RSQSLWIPKSLLCKRFHVKCAG 526          
BLAST of EWM26205.1 vs. NCBI_GenBank
Match: gi|568036786|gb|ETM34388.1| (hypothetical protein L914_18514 [Phytophthora parasitica])

HSP 1 Score: 209.92 bits (533), Expect = 5.357e-53
Identity = 193/602 (32.06%), Postives = 279/602 (46.35%), Query Frame = 0
Query:    5 RGKTQKDEVRDEEGRRRFHGAFTGGFSAGYYNSVGSQEGWQPSTFKSSRDNRASSRPSRQRPEDFMDEEDG-LLGRDLHTQLPYDTLGVSSKQLLRKEVEKEAVGSSIPGLGMVDELLVPTEVAIGKKLLQMMGWKEGVGVGSRQRRPRKKRGKDSGEGEAGVEEAVDDDVAFLPEHLRDDSTLVQQGKITFARPTLGLTLLPRPKNDRHGLGFDPEKDAPELAAFRRQGPNDWGGEDDSRGVYRMGDVLGKDTSSRAGRRNASGF---ALDEDED-DVYDQVTERAGQGERGGREGGATGKEGGRESMYLSTLGEPDDEEEESRSGQASTLMAGAAKRVALEAWISGGGGGGRGAEIPGAVGLRCPTDSRPVLEGFVLGVKDLGYQPP--AWPLPTPPRGFVPYHSFETEQGGVE---------GRGEDHAG---TVRRHRDANQGRLRAETRGGLLGEAPVQAAAGTSSIFDLMSEADRARIETFKTQGAPALAHAAASEAAESPSAS---FPPVPSAFQGMQGALAKRFSVAEKPATTGPTLPEGLTEGGKGAGGIAPSVALAGPALPKVKTIPAPARSQVLFQPVSLLCKRFNVSVPG 584
            RG  +  EV D +GRRRFHGAFTGGFSAGYYNSVGS+EGW P TF SS    + S    QRPEDFMDEED  LLG+ L T   YDTL   +K+ L+++ ++    +SIPG  + ++ ++P   +IG KLL+ MGWKEG G+G R RR + +  KD+ + +   ++A +D     P+   ++   V   K+   +        P+PK DR+G GFDP  DAPE + +++Q       E   R V    D L    S+    R  +G+   AL+E++D DVY                G  +  E  R    ++ LG   D +    S Q S                       R  E  G     C +D RPVL GF L       +PP       T P  F  YH FE ++   +             D+ G      R R A     + +T G   G   V+++  T S+FDL+ +  +A++     Q    +  ++A  A    SA+     P+ S   G Q       S+A++  ++  T+ E +++          SV++  P   K +      RSQ L+ P SLLCKRF+V   G
Sbjct:    3 RGSIRNQEVTDAQGRRRFHGAFTGGFSAGYYNSVGSEEGWTPKTFSSS--RSSRSSRVEQRPEDFMDEEDDPLLGKRLETTERYDTLQTGAKRQLQQQPDR--TEASIPGFSLPEDWVLPVNDSIGAKLLKQMGWKEGHGIGQRVRRRKYQDEKDTEQPKLLTQDAREDKTKTEPQD--EEEVYVPPRKVFDVQKA-----FPKPKLDRYGAGFDPYSDAPEFSMYKQQQERKQ-KEGSHRQVVSFLDAL---KSTDGSNRATTGYGLSALEENDDIDVY----------------GTVSMAEFDR---VIAPLGTRKDVKRLDSSAQES-----------------------RRYEKLGHSRALC-SDGRPVLPGFELAAS--KEKPPKAVNVHLTVPSDFKAYHRFEDDEDQSDTVTALYRKYNFSTDNMGNRMVTARQRAALLEDDKKDTHGATAGAGEVKSS--TRSVFDLLGDEQKAKLFDAAAQAKQGVPLSSAKRATTDVSAAPRVRQPLVSGSTGDQFRATISASIAKRFVSSKSTVDEEISD----------SVSVEEPQTKKSR------RSQSLWIPKSLLCKRFHVKCAG 526          
BLAST of EWM26205.1 vs. NCBI_GenBank
Match: gi|567948778|gb|ETK74518.1| (hypothetical protein, variant [Phytophthora parasitica] >gi|568006924|gb|ETL81170.1| hypothetical protein, variant [Phytophthora parasitica])

HSP 1 Score: 208.764 bits (530), Expect = 1.009e-52
Identity = 193/602 (32.06%), Postives = 279/602 (46.35%), Query Frame = 0
Query:    5 RGKTQKDEVRDEEGRRRFHGAFTGGFSAGYYNSVGSQEGWQPSTFKSSRDNRASSRPSRQRPEDFMDEEDG-LLGRDLHTQLPYDTLGVSSKQLLRKEVEKEAVGSSIPGLGMVDELLVPTEVAIGKKLLQMMGWKEGVGVGSRQRRPRKKRGKDSGEGEAGVEEAVDDDVAFLPEHLRDDSTLVQQGKITFARPTLGLTLLPRPKNDRHGLGFDPEKDAPELAAFRRQGPNDWGGEDDSRGVYRMGDVLGKDTSSRAGRRNASGF---ALDEDED-DVYDQVTERAGQGERGGREGGATGKEGGRESMYLSTLGEPDDEEEESRSGQASTLMAGAAKRVALEAWISGGGGGGRGAEIPGAVGLRCPTDSRPVLEGFVLGVKDLGYQPP--AWPLPTPPRGFVPYHSFETEQGGVE---------GRGEDHAG---TVRRHRDANQGRLRAETRGGLLGEAPVQAAAGTSSIFDLMSEADRARIETFKTQGAPALAHAAASEAAESPSAS---FPPVPSAFQGMQGALAKRFSVAEKPATTGPTLPEGLTEGGKGAGGIAPSVALAGPALPKVKTIPAPARSQVLFQPVSLLCKRFNVSVPG 584
            RG  +  EV D +GRRRFHGAFTGGFSAGYYNSVGS+EGW P TF SS    + S    QRPEDFMDEED  LLG+ L T   YDTL   +K+ L+++ ++    +SIPG  + ++ ++P   +IG KLL+ MGWKEG G+G R RR + +  KD+ + +   ++A +D     P+   ++   V   K+   +        P+PK DR+G GFDP  DAPE + +++Q       E   R V    D L    S+    R  +G+   AL+E++D DVY                G  +  E  R    ++ LG   D +    S Q S                       R  E  G     C +D RPVL GF L       +PP       T P  F  YH FE ++   +             D+ G      R R A     + +T G   G   V+++  T S+FDL+ +  +A++     Q    +  ++A  A    SA+     P+ S   G Q       S+A++  ++  T+ E +++          SV++  P   K +      RSQ L+ P SLLCKRF+V   G
Sbjct:    3 RGSIRNQEVTDAQGRRRFHGAFTGGFSAGYYNSVGSEEGWTPRTFSSS--RSSRSSRVEQRPEDFMDEEDDPLLGKRLETTERYDTLQTGAKRQLQQQPDR--TEASIPGFSLPEDWVLPVNDSIGAKLLKQMGWKEGHGIGQRVRRRKYQDEKDTEQPKLLTQDAREDKTKTEPQD--EEEVYVPPRKVFDVQKA-----FPKPKLDRYGAGFDPYSDAPEFSMYKQQQERKQ-KEGSHRQVVSFLDAL---KSTDGSNRATTGYGLSALEENDDIDVY----------------GTVSMAEFDR---VIAPLGTRKDVKRLDSSAQES-----------------------RRYEKLGHSRALC-SDGRPVLPGFELTAS--KEKPPKAVNVHLTVPSDFKAYHRFEDDEDQSDTVTALYRKYNFSTDNMGNRMVTARQRAALLEDDKKDTHGDTAGAGEVKSS--TRSVFDLLGDEQKAKLFDAAAQAKQGVPLSSAKRATTDVSAAPRVRQPLVSGSTGDQFRATISASIAKRFVSSKSTVDEEISD----------SVSVEEPQTKKSR------RSQSLWIPKSLLCKRFHVKCAG 526          
BLAST of EWM26205.1 vs. NCBI_GenBank
Match: gi|570315138|gb|ETO63086.1| (hypothetical protein, variant [Phytophthora parasitica P1976])

HSP 1 Score: 208.379 bits (529), Expect = 1.047e-52
Identity = 193/602 (32.06%), Postives = 279/602 (46.35%), Query Frame = 0
Query:    5 RGKTQKDEVRDEEGRRRFHGAFTGGFSAGYYNSVGSQEGWQPSTFKSSRDNRASSRPSRQRPEDFMDEEDG-LLGRDLHTQLPYDTLGVSSKQLLRKEVEKEAVGSSIPGLGMVDELLVPTEVAIGKKLLQMMGWKEGVGVGSRQRRPRKKRGKDSGEGEAGVEEAVDDDVAFLPEHLRDDSTLVQQGKITFARPTLGLTLLPRPKNDRHGLGFDPEKDAPELAAFRRQGPNDWGGEDDSRGVYRMGDVLGKDTSSRAGRRNASGF---ALDEDED-DVYDQVTERAGQGERGGREGGATGKEGGRESMYLSTLGEPDDEEEESRSGQASTLMAGAAKRVALEAWISGGGGGGRGAEIPGAVGLRCPTDSRPVLEGFVLGVKDLGYQPP--AWPLPTPPRGFVPYHSFETEQGGVE---------GRGEDHAG---TVRRHRDANQGRLRAETRGGLLGEAPVQAAAGTSSIFDLMSEADRARIETFKTQGAPALAHAAASEAAESPSAS---FPPVPSAFQGMQGALAKRFSVAEKPATTGPTLPEGLTEGGKGAGGIAPSVALAGPALPKVKTIPAPARSQVLFQPVSLLCKRFNVSVPG 584
            RG  +  EV D +GRRRFHGAFTGGFSAGYYNSVGS+EGW P TF SS    + S    QRPEDFMDEED  LLG+ L T   YDTL   +K+ L+++ ++    +SIPG  + ++ ++P   +IG KLL+ MGWKEG G+G R RR + +  KD+ + +   ++A +D     P+   ++   V   K+   +        P+PK DR+G GFDP  DAPE + +++Q       E   R V    D L    S+    R  +G+   AL+E++D DVY                G  +  E  R    ++ LG   D +    S Q S                       R  E  G     C +D RPVL GF L       +PP       T P  F  YH FE ++   +             D+ G      R R A     + +T G   G   V+++  T S+FDL+ +  +A++     Q    +  ++A  A    SA+     P+ S   G Q       S+A++  ++  T+ E +++          SV++  P   K +      RSQ L+ P SLLCKRF+V   G
Sbjct:    3 RGSIRNQEVTDAQGRRRFHGAFTGGFSAGYYNSVGSEEGWTPRTFSSS--RSSRSSRVEQRPEDFMDEEDDPLLGKRLETTERYDTLQTGAKRQLQQQPDR--TEASIPGFSLPEDWVLPVNDSIGAKLLKQMGWKEGHGIGQRVRRRKYQDEKDTEQPKLLTQDAREDKTKTEPQD--EEEVYVPPRKVFDVQKA-----FPKPKLDRYGAGFDPYSDAPEFSMYKQQQERKQ-KEGSHRQVVSFLDAL---KSTDGSNRATTGYGLSALEENDDIDVY----------------GTVSMAEFDR---VIAPLGARKDVKRLDSSAQES-----------------------RRYEKLGHSRALC-SDGRPVLPGFELAAS--KEKPPKAVNVHLTVPSDFKAYHRFEDDEDQSDTVTALYRKYNFSTDNMGNRMVTARQRAALLEDDKKDTHGDTAGAGEVKSS--TRSVFDLLGDEQKAKLFDAAAQAKQGVPLSSAKRATTDVSAAPRVRQPLVSGSTGDQFRATISASIAKRFVSSKSTVDEEISD----------SVSVEEPQTKKSR------RSQSLWIPKSLLCKRFHVKCAG 526          
BLAST of EWM26205.1 vs. NCBI_GenBank
Match: gi|566011231|gb|ETI34142.1| (hypothetical protein, variant [Phytophthora parasitica P1569])

HSP 1 Score: 208.379 bits (529), Expect = 1.104e-52
Identity = 193/603 (32.01%), Postives = 281/603 (46.60%), Query Frame = 0
Query:    5 RGKTQKDEVRDEEGRRRFHGAFTGGFSAGYYNSVGSQEGWQPSTFKSSRDNRASSRPSRQRPEDFMDEEDG-LLGRDLHTQLPYDTLGVSSKQLLRKEVEKEAVGSSIPGLGMVDELLVPTEVAIGKKLLQMMGWKEGVGVGSRQRRPRKKRGKDSGEGEAGVEEAVDDDVAFLPEHLRDDSTLVQQGKITFARPTLGLTLLPRPKNDRHGLGFDPEKDAPELAAFRRQGPNDWGGEDDS-RGVYRMGDVLGKDTSSRAGRRNASGF---ALDEDED-DVYDQVTERAGQGERGGREGGATGKEGGRESMYLSTLGEPDDEEEESRSGQASTLMAGAAKRVALEAWISGGGGGGRGAEIPGAVGLRCPTDSRPVLEGFVLGVKDLGYQPP--AWPLPTPPRGFVPYHSFETEQGGVE---------GRGEDHAG---TVRRHRDANQGRLRAETRGGLLGEAPVQAAAGTSSIFDLMSEADRARIETFKTQGAPALAHAAASEAAESPSAS---FPPVPSAFQGMQGALAKRFSVAEKPATTGPTLPEGLTEGGKGAGGIAPSVALAGPALPKVKTIPAPARSQVLFQPVSLLCKRFNVSVPG 584
            RG  +  EV D +GRRRFHGAFTGGFSAGYYNSVGS+EGW P TF SS    + S    QRPEDFMDEED  LLG+ L T   YDTL   +K+ L+++ ++    +SIPG  + ++ ++P   +IG KLL+ MGWKEG G+G R RR + +  KD+ + +   ++A +D     P+   ++   V   K+   +        P+PK DR+G GFDP  DAPE + +++Q       ++ S R V    D L    S+    R  +G+   AL+E++D DVY                G  +  E  R    ++ LG   D +    S Q S                       R  E  G     C +D RPVL GF L       +PP       T P  F  YH FE ++   +             D+ G      R R A     + +T G   G   V+++  T S+FDL+ +  +A++     Q    +  ++A  A    SA+     P+ S   G Q       S+A++  ++  T+ E +++          SV++  P   K +      RSQ L+ P SLLCKRF+V   G
Sbjct:    3 RGSIRNQEVTDAQGRRRFHGAFTGGFSAGYYNSVGSEEGWTPRTFSSS--RSSRSSRVEQRPEDFMDEEDDPLLGKRLETTERYDTLQTGAKRQLQQQPDR--TEASIPGFSLPEDWVLPVNDSIGAKLLKQMGWKEGHGIGQRVRRRKYQDEKDTEQPKLLTQDAREDKTKTEPQD--EEEVYVPPRKVFDVQKA-----FPKPKLDRYGAGFDPYSDAPEFSMYKQQQERKQKEKEGSHRQVVSFLDAL---KSTDGSNRATTGYGLSALEENDDIDVY----------------GTVSMAEFDR---VIAPLGARKDVKRLDSSAQES-----------------------RRYEKLGHSRALC-SDGRPVLPGFELAAS--KEKPPKAVNVHLTVPSDFKAYHRFEDDEDQSDTVTALYRKYNFSTDNMGNRMVTARQRAALLEDDKKDTHGDTAGAGEVKSS--TRSVFDLLGDEQKAKLFDAAAQAKQGVPLSSAKRATTDVSAAPRVRQPLVSGSTGDQFRATISASIAKRFVSSKSTVDEEISD----------SVSVEEPQTKKSR------RSQSLWIPKSLLCKRFHVKCAG 528          
BLAST of EWM26205.1 vs. NCBI_GenBank
Match: gi|570315137|gb|ETO63085.1| (hypothetical protein F444_19224 [Phytophthora parasitica P1976])

HSP 1 Score: 208.764 bits (530), Expect = 1.185e-52
Identity = 193/602 (32.06%), Postives = 279/602 (46.35%), Query Frame = 0
Query:    5 RGKTQKDEVRDEEGRRRFHGAFTGGFSAGYYNSVGSQEGWQPSTFKSSRDNRASSRPSRQRPEDFMDEEDG-LLGRDLHTQLPYDTLGVSSKQLLRKEVEKEAVGSSIPGLGMVDELLVPTEVAIGKKLLQMMGWKEGVGVGSRQRRPRKKRGKDSGEGEAGVEEAVDDDVAFLPEHLRDDSTLVQQGKITFARPTLGLTLLPRPKNDRHGLGFDPEKDAPELAAFRRQGPNDWGGEDDSRGVYRMGDVLGKDTSSRAGRRNASGF---ALDEDED-DVYDQVTERAGQGERGGREGGATGKEGGRESMYLSTLGEPDDEEEESRSGQASTLMAGAAKRVALEAWISGGGGGGRGAEIPGAVGLRCPTDSRPVLEGFVLGVKDLGYQPP--AWPLPTPPRGFVPYHSFETEQGGVE---------GRGEDHAG---TVRRHRDANQGRLRAETRGGLLGEAPVQAAAGTSSIFDLMSEADRARIETFKTQGAPALAHAAASEAAESPSAS---FPPVPSAFQGMQGALAKRFSVAEKPATTGPTLPEGLTEGGKGAGGIAPSVALAGPALPKVKTIPAPARSQVLFQPVSLLCKRFNVSVPG 584
            RG  +  EV D +GRRRFHGAFTGGFSAGYYNSVGS+EGW P TF SS    + S    QRPEDFMDEED  LLG+ L T   YDTL   +K+ L+++ ++    +SIPG  + ++ ++P   +IG KLL+ MGWKEG G+G R RR + +  KD+ + +   ++A +D     P+   ++   V   K+   +        P+PK DR+G GFDP  DAPE + +++Q       E   R V    D L    S+    R  +G+   AL+E++D DVY                G  +  E  R    ++ LG   D +    S Q S                       R  E  G     C +D RPVL GF L       +PP       T P  F  YH FE ++   +             D+ G      R R A     + +T G   G   V+++  T S+FDL+ +  +A++     Q    +  ++A  A    SA+     P+ S   G Q       S+A++  ++  T+ E +++          SV++  P   K +      RSQ L+ P SLLCKRF+V   G
Sbjct:    3 RGSIRNQEVTDAQGRRRFHGAFTGGFSAGYYNSVGSEEGWTPRTFSSS--RSSRSSRVEQRPEDFMDEEDDPLLGKRLETTERYDTLQTGAKRQLQQQPDR--TEASIPGFSLPEDWVLPVNDSIGAKLLKQMGWKEGHGIGQRVRRRKYQDEKDTEQPKLLTQDAREDKTKTEPQD--EEEVYVPPRKVFDVQKA-----FPKPKLDRYGAGFDPYSDAPEFSMYKQQQERKQ-KEGSHRQVVSFLDAL---KSTDGSNRATTGYGLSALEENDDIDVY----------------GTVSMAEFDR---VIAPLGARKDVKRLDSSAQES-----------------------RRYEKLGHSRALC-SDGRPVLPGFELAAS--KEKPPKAVNVHLTVPSDFKAYHRFEDDEDQSDTVTALYRKYNFSTDNMGNRMVTARQRAALLEDDKKDTHGDTAGAGEVKSS--TRSVFDLLGDEQKAKLFDAAAQAKQGVPLSSAKRATTDVSAAPRVRQPLVSGSTGDQFRATISASIAKRFVSSKSTVDEEISD----------SVSVEEPQTKKSR------RSQSLWIPKSLLCKRFHVKCAG 526          
BLAST of EWM26205.1 vs. NCBI_GenBank
Match: gi|567977424|gb|ETL27926.1| (hypothetical protein, variant [Phytophthora parasitica] >gi|570938796|gb|ETP04053.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1] >gi|570969058|gb|ETP32177.1| hypothetical protein, variant [Phytophthora parasitica P10297])

HSP 1 Score: 208.379 bits (529), Expect = 1.311e-52
Identity = 193/602 (32.06%), Postives = 279/602 (46.35%), Query Frame = 0
Query:    5 RGKTQKDEVRDEEGRRRFHGAFTGGFSAGYYNSVGSQEGWQPSTFKSSRDNRASSRPSRQRPEDFMDEEDG-LLGRDLHTQLPYDTLGVSSKQLLRKEVEKEAVGSSIPGLGMVDELLVPTEVAIGKKLLQMMGWKEGVGVGSRQRRPRKKRGKDSGEGEAGVEEAVDDDVAFLPEHLRDDSTLVQQGKITFARPTLGLTLLPRPKNDRHGLGFDPEKDAPELAAFRRQGPNDWGGEDDSRGVYRMGDVLGKDTSSRAGRRNASGF---ALDEDED-DVYDQVTERAGQGERGGREGGATGKEGGRESMYLSTLGEPDDEEEESRSGQASTLMAGAAKRVALEAWISGGGGGGRGAEIPGAVGLRCPTDSRPVLEGFVLGVKDLGYQPP--AWPLPTPPRGFVPYHSFETEQGGVE---------GRGEDHAG---TVRRHRDANQGRLRAETRGGLLGEAPVQAAAGTSSIFDLMSEADRARIETFKTQGAPALAHAAASEAAESPSAS---FPPVPSAFQGMQGALAKRFSVAEKPATTGPTLPEGLTEGGKGAGGIAPSVALAGPALPKVKTIPAPARSQVLFQPVSLLCKRFNVSVPG 584
            RG  +  EV D +GRRRFHGAFTGGFSAGYYNSVGS+EGW P TF SS    + S    QRPEDFMDEED  LLG+ L T   YDTL   +K+ L+++ ++    +SIPG  + ++ ++P   +IG KLL+ MGWKEG G+G R RR + +  KD+ + +   ++A +D     P+   ++   V   K+   +        P+PK DR+G GFDP  DAPE + +++Q       E   R V    D L    S+    R  +G+   AL+E++D DVY                G  +  E  R    ++ LG   D +    S Q S                       R  E  G     C +D RPVL GF L       +PP       T P  F  YH FE ++   +             D+ G      R R A     + +T G   G   V+++  T S+FDL+ +  +A++     Q    +  ++A  A    SA+     P+ S   G Q       S+A++  ++  T+ E +++          SV++  P   K +      RSQ L+ P SLLCKRF+V   G
Sbjct:    3 RGSIRNQEVTDAQGRRRFHGAFTGGFSAGYYNSVGSEEGWTPRTFSSS--RSSRSSRVEQRPEDFMDEEDDPLLGKRLETTERYDTLQTGAKRQLQQQPDR--TEASIPGFSLPEDWVLPVNDSIGAKLLKQMGWKEGHGIGQRVRRRKYQDEKDTEQPKLLTQDAREDKTKTEPQD--EEEVYVPPRKVFDVQKA-----FPKPKLDRYGAGFDPYSDAPEFSMYKQQQERKQ-KEGSHRQVVSFLDAL---KSTDGSNRATTGYGLSALEENDDIDVY----------------GTVSMAEFDR---VIAPLGTRKDVKRLDSSAQES-----------------------RRYEKLGHSRALC-SDGRPVLPGFELTAS--KEKPPKAVNVHLTVPSDFKAYHRFEDDEDQSDTVTALYRKYNFSTDNMGNRMVTARQRAALLEDDKKDTHGDTAGAGEVKSS--TRSVFDLLGDEQKAKLFDAAAQAKQGVPLSSAKRATTDVSAAPRVRQPLVSGSTGDQFRATISASIAKRFVSSKSTVDEEISD----------SVSVEEPQTKKSR------RSQSLWIPKSLLCKRFHVKCAG 526          
BLAST of EWM26205.1 vs. NCBI_GenBank
Match: gi|566011230|gb|ETI34141.1| (hypothetical protein F443_19278 [Phytophthora parasitica P1569])

HSP 1 Score: 208.379 bits (529), Expect = 1.666e-52
Identity = 193/603 (32.01%), Postives = 281/603 (46.60%), Query Frame = 0
Query:    5 RGKTQKDEVRDEEGRRRFHGAFTGGFSAGYYNSVGSQEGWQPSTFKSSRDNRASSRPSRQRPEDFMDEEDG-LLGRDLHTQLPYDTLGVSSKQLLRKEVEKEAVGSSIPGLGMVDELLVPTEVAIGKKLLQMMGWKEGVGVGSRQRRPRKKRGKDSGEGEAGVEEAVDDDVAFLPEHLRDDSTLVQQGKITFARPTLGLTLLPRPKNDRHGLGFDPEKDAPELAAFRRQGPNDWGGEDDS-RGVYRMGDVLGKDTSSRAGRRNASGF---ALDEDED-DVYDQVTERAGQGERGGREGGATGKEGGRESMYLSTLGEPDDEEEESRSGQASTLMAGAAKRVALEAWISGGGGGGRGAEIPGAVGLRCPTDSRPVLEGFVLGVKDLGYQPP--AWPLPTPPRGFVPYHSFETEQGGVE---------GRGEDHAG---TVRRHRDANQGRLRAETRGGLLGEAPVQAAAGTSSIFDLMSEADRARIETFKTQGAPALAHAAASEAAESPSAS---FPPVPSAFQGMQGALAKRFSVAEKPATTGPTLPEGLTEGGKGAGGIAPSVALAGPALPKVKTIPAPARSQVLFQPVSLLCKRFNVSVPG 584
            RG  +  EV D +GRRRFHGAFTGGFSAGYYNSVGS+EGW P TF SS    + S    QRPEDFMDEED  LLG+ L T   YDTL   +K+ L+++ ++    +SIPG  + ++ ++P   +IG KLL+ MGWKEG G+G R RR + +  KD+ + +   ++A +D     P+   ++   V   K+   +        P+PK DR+G GFDP  DAPE + +++Q       ++ S R V    D L    S+    R  +G+   AL+E++D DVY                G  +  E  R    ++ LG   D +    S Q S                       R  E  G     C +D RPVL GF L       +PP       T P  F  YH FE ++   +             D+ G      R R A     + +T G   G   V+++  T S+FDL+ +  +A++     Q    +  ++A  A    SA+     P+ S   G Q       S+A++  ++  T+ E +++          SV++  P   K +      RSQ L+ P SLLCKRF+V   G
Sbjct:    3 RGSIRNQEVTDAQGRRRFHGAFTGGFSAGYYNSVGSEEGWTPRTFSSS--RSSRSSRVEQRPEDFMDEEDDPLLGKRLETTERYDTLQTGAKRQLQQQPDR--TEASIPGFSLPEDWVLPVNDSIGAKLLKQMGWKEGHGIGQRVRRRKYQDEKDTEQPKLLTQDAREDKTKTEPQD--EEEVYVPPRKVFDVQKA-----FPKPKLDRYGAGFDPYSDAPEFSMYKQQQERKQKEKEGSHRQVVSFLDAL---KSTDGSNRATTGYGLSALEENDDIDVY----------------GTVSMAEFDR---VIAPLGARKDVKRLDSSAQES-----------------------RRYEKLGHSRALC-SDGRPVLPGFELAAS--KEKPPKAVNVHLTVPSDFKAYHRFEDDEDQSDTVTALYRKYNFSTDNMGNRMVTARQRAALLEDDKKDTHGDTAGAGEVKSS--TRSVFDLLGDEQKAKLFDAAAQAKQGVPLSSAKRATTDVSAAPRVRQPLVSGSTGDQFRATISASIAKRFVSSKSTVDEEISD----------SVSVEEPQTKKSR------RSQSLWIPKSLLCKRFHVKCAG 528          
The following BLAST results are available for this feature:
BLAST of EWM26205.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108204|gb|EWM26205.1|0.000e+0100.00g patch domain-containing protein 1 [Nannochlorops... [more]
gi|553192060|ref|XP_005855507.1|0.000e+0100.00g patch domain-containing protein 1, partial [Nann... [more]
gi|568036787|gb|ETM34389.1|4.504e-5332.06hypothetical protein, variant [Phytophthora parasi... [more]
gi|568036786|gb|ETM34388.1|5.357e-5332.06hypothetical protein L914_18514 [Phytophthora para... [more]
gi|567948778|gb|ETK74518.1|1.009e-5232.06hypothetical protein, variant [Phytophthora parasi... [more]
gi|570315138|gb|ETO63086.1|1.047e-5232.06hypothetical protein, variant [Phytophthora parasi... [more]
gi|566011231|gb|ETI34142.1|1.104e-5232.01hypothetical protein, variant [Phytophthora parasi... [more]
gi|570315137|gb|ETO63085.1|1.185e-5232.06hypothetical protein F444_19224 [Phytophthora para... [more]
gi|567977424|gb|ETL27926.1|1.311e-5232.06hypothetical protein, variant [Phytophthora parasi... [more]
gi|566011230|gb|ETI34141.1|1.666e-5232.01hypothetical protein F443_19278 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4469rna4469Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications