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Properties
| Property Name | Value |
|---|
| Product | RNA binding protein |
| Orig transcript id | gnl|cribi|Naga_100025g25.7538.mrna |
| Orig protein id | gnl|cribi|Naga_100025g25.7538 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:650804..652383 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4464 ID=rna4464|Name=rna4464|organism=Nannochloropsis gaditana|type=mRNA|length=1021bp
GCAGGAGGTTATCTCATCTAATTTCCTAGTCTTTCCTTTATGGAGACAGG
GTCTATCCATGGTGACGCTAGTTGGCCTCATTATTACTACGTAGCTATAC
ACCTTTGAGGAGGCAATTTTACACGCTCTTCATTTGCCCATTGCGTGGTA
TCATGAGCCCACGACCCCATCCCCTCACGAGCGTGCTCTTTCTCGTCCTC
GTCTTCCTCACACCGGGAGTCACCCAGGGGTTCTCTCCATCTCTTCGCCC
ACGGATAGAACGAGGCCTGAAGACATCAATCGCGGCGCTGCCTTTTTCCA
CCGACCCCGCTCCCTTGTCTGGAAAGGAGCCCCTTGTGACCCAGGCTGAA
ATTGAAGCTTGTGCGGCCGCCTTTGGAATCCAGCTTCGACTCTCTACTCT
AGGCCCATTCTACCGCATAATCGCGCGCTTGACAAACGACAAAGAAGGAG
TTGAGCCCATAGGATATACTTCAGGCTTTGTTGCACCCTTCTTCAAGCTT
GTACATTTAGATACCATGCAGGTGCGCCGTCGCTACTGGAAGCAGCTGGA
TGGCAGCAACAGATTTCCCTACGGTTGTGGGCTCCTCTTGGGGGCCGCTG
CAATGCGGTATGCGTACGACAAGGGCTGCAGTAAAGCCGAGCTCCTGGCA
ATCAATGACGACGAAAAGAGCCATCGCCTGCTCCTGGGCTTCTACCGCAC
TGCGGGCTTTGTGAGCGTGAAGGAGGTGACCAATGACCTGCGGTGCGTGC
CAGACCTGCTAGTGTGGGGCGGGGTGGGTACGCGAATGGACATGCCGGTG
GAGGAATATTTGCGCCGGTGGCGGACGGTGATCGTGAGTCGGGGGGAGGA
GTTTCTCAACAGGAGATAAGGCATTGCGTCACGCAGTATAAGGCCAGAAA
AATAGGAATACAAAACTATGTTTCACGTCCGAGAATCCTTATCTTGCACT
GCGCGCTCCAGTTTATTCTTTTGTCGTCAATATGCACCAGGAAAAGACAA
TTAATGCATCAACCAGTTTGT back to topprotein sequence of rna4464 >rna4464-protein ID=rna4464-protein|Name=rna4464|organism=Nannochloropsis gaditana|type=polypeptide|length=407bp
MALKAKKPKDTSLDAGGGKEKTGQKKEVDSRLAKPVKGVKKGSNDAEDRK
SGAEGAIDGSTNSPPETFQTNSADFVALSDAVKKKMAIQAAKDQRKEGKA
KARKAAAAAKASKPNTVIYLGHVPHGFFEDQMRAFFGQFGDVKHIRLSRS
KKTGKSRGYAFLEFAEAEVASVVAETMQGYYLGGRKLVCEVLPPSRVHPK
LFLDADKKWRVIPWRQLEKDRRTAPKTEEEARKCLSRLVRGDNRKRKRLA
GLGIQYDFPGYEATASQAYVKRKKDDLAVEAEKSEGKSGAGGLARRVRGQ
GGDNGGGKGKRRMTEPEAEAAPEEKVKGNTSSKKKAKVGTLDDVSSTPKG
GKRVEKETGGAAATPSTTGKKSHAVLDADQVVKKSAAQTGGVGGKKGGKK
GAASKKK back to topmRNA from alignment at CM002463.1:650804..652383+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4464 ID=rna4464|Name=rna4464|organism=Nannochloropsis gaditana|type=mRNA|length=1580bp|location=Sequence derived from alignment at CM002463.1:650804..652383+ (Nannochloropsis gaditana)
GTGGTACGTTCTTTTACGATGCGGTGCCTTGTAGCAAAGAGGCTGTCGTG
GCGACTTGCCCGCTGTGGCGGTTCTTTTTGCCAACCACTCATTGAGTATC
TTGTCAACATGTAAACAGACATGGCCCTCAAAGCAAAAAAGCCAAAGGAC
ACCTCATTGGatgcagggggggggaaagaaaaaactGGACAGAAGAAAGA
AGTTGATTCCCGCCTAGCAAAGCCAGTAAAGGGCGTAAAGAAGGGTAGCA
ATGATGCAGAAGACCGTAAAAGCGGGGCTGAAGGCGCTATTGATGGTTCC
ACTAACAGCCCTCCTGAGACATTCCAGACCAACAGCGCGGATTTTGTTGC
CTTGTCTGATGCTGtaaagaagaagatggcgaTTCAAGCTGCAAAGGAtc
aaagaaaagaaggaaaagccaAGGCGCGAaaggccgctgccgctgcgaAA
GCAAGCAAACCCAACACAGTCATTTACTTGGGCCACGTCCCCCACGGGTT
CTTCGAGGACCAGATGCGAGCTTTTTTTGGTCAATTTGGAGACGTGAAAC
ATATCCGCTTGAGTCGGTCCAAGAAGACAGGAAAATCTCGCGGGTACGCG
TTCTTGGAATtcgcggaggcggaagtGGCAAGCGTTGTGGCTGAGACGAT
GCAGGGATATTACCTGGGAGGCCGCAAGCTTGTGTGCGAGGTGCTGCCGC
CCAGCAGGGTGCACCCCAAGCTTTTTCTAGATGCCGACAAGAAATGGCGC
GTCATTCCCTGGCGACAATTAGAGAAGGATCGTCGCACAGCGcccaagac
ggaggaggaagcgcggaaATGCCTGAGCCGGTTGGTACGGGGGGATAACC
GTAAACGCAAACGGCTGGCCGGCTTGGGCATTCAATACGACTTCCCTGGT
TACGAGGCGACGGCGTCCCAGGCATATGTGAAACGGAAGAAGGACGATTT
GGctgtggaggcggagaagagtGAAGGGAAGTCGGGTGCCGGAGGGTTGG
CGCGGAGGGTGCgtgggcaggggggagacaatggcggagggaaagggaaa
aggaggatgaCAGAGCCGGAGGCTGAGGCGGcgccggaggagaaggtgaa
agGAAATACgagcagcaagaagaaggccaaggTCGGCACTCTGGACGATG
TTTCCTCGACCCCGAAGGGGGGCAAGCGCGTCGAGAAAGAGActggaggg
gcagcggcTACACCGAGCACCACCGGCAAAAAGTCACATGCCGTCCTTGA
TGCAGACCAAGTAGTCAAGAAATCGGCGGCCCAAACAGGGGGAgtagggg
gaaagaagggcgggaagaaaggcgcagcaagcaaaaaaaagtGAGCTGGT
TGCCTCCCCAGGAGTGATTCCTCGTTTGACGTGCGGCGCCATGCTCTCTA
ACACCTCGTCCTTTGGCACACAAAAGAAAACTACAATATGGCGAAAAGGC
TACAGGCATCCATTCTGCCATGCTTTGTAAATGTGTGGGTGCTTTTTTTG
TTGGGCGCTCCCCTcacagcttcctccccctaGAACAGGGCTAGTCTCAA
GCGATCCCTCGCCTCTGAAGAAGAcctggc back to topCoding sequence (CDS) from alignment at CM002463.1:650804..652383+ >rna4464 ID=rna4464|Name=rna4464|organism=Nannochloropsis gaditana|type=CDS|length=1224bp|location=Sequence derived from alignment at CM002463.1:650804..652383+ (Nannochloropsis gaditana)
ATGGCCCTCAAAGCAAAAAAGCCAAAGGACACCTCATTGGatgcaggggg
ggggaaagaaaaaactGGACAGAAGAAAGAAGTTGATTCCCGCCTAGCAA
AGCCAGTAAAGGGCGTAAAGAAGGGTAGCAATGATGCAGAAGACCGTAAA
AGCGGGGCTGAAGGCGCTATTGATGGTTCCACTAACAGCCCTCCTGAGAC
ATTCCAGACCAACAGCGCGGATTTTGTTGCCTTGTCTGATGCTGtaaaga
agaagatggcgaTTCAAGCTGCAAAGGAtcaaagaaaagaaggaaaagcc
aAGGCGCGAaaggccgctgccgctgcgaAAGCAAGCAAACCCAACACAGT
CATTTACTTGGGCCACGTCCCCCACGGGTTCTTCGAGGACCAGATGCGAG
CTTTTTTTGGTCAATTTGGAGACGTGAAACATATCCGCTTGAGTCGGTCC
AAGAAGACAGGAAAATCTCGCGGGTACGCGTTCTTGGAATtcgcggaggc
ggaagtGGCAAGCGTTGTGGCTGAGACGATGCAGGGATATTACCTGGGAG
GCCGCAAGCTTGTGTGCGAGGTGCTGCCGCCCAGCAGGGTGCACCCCAAG
CTTTTTCTAGATGCCGACAAGAAATGGCGCGTCATTCCCTGGCGACAATT
AGAGAAGGATCGTCGCACAGCGcccaagacggaggaggaagcgcggaaAT
GCCTGAGCCGGTTGGTACGGGGGGATAACCGTAAACGCAAACGGCTGGCC
GGCTTGGGCATTCAATACGACTTCCCTGGTTACGAGGCGACGGCGTCCCA
GGCATATGTGAAACGGAAGAAGGACGATTTGGctgtggaggcggagaaga
gtGAAGGGAAGTCGGGTGCCGGAGGGTTGGCGCGGAGGGTGCgtgggcag
gggggagacaatggcggagggaaagggaaaaggaggatgaCAGAGCCGGA
GGCTGAGGCGGcgccggaggagaaggtgaaagGAAATACgagcagcaaga
agaaggccaaggTCGGCACTCTGGACGATGTTTCCTCGACCCCGAAGGGG
GGCAAGCGCGTCGAGAAAGAGActggaggggcagcggcTACACCGAGCAC
CACCGGCAAAAAGTCACATGCCGTCCTTGATGCAGACCAAGTAGTCAAGA
AATCGGCGGCCCAAACAGGGGGAgtagggggaaagaagggcgggaagaaa
ggcgcagcaagcaaaaaaaagtGA back to top
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