EWM26247.1, cds4453 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26247.1 vs. NCBI_GenBank
Match: gi|585108246|gb|EWM26247.1| (RNA binding protein [Nannochloropsis gaditana]) HSP 1 Score: 808.905 bits (2088), Expect = 0.000e+0 Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 0
Query: 1 MALKAKKPKDTSLDAGGGKEKTGQKKEVDSRLAKPVKGVKKGSNDAEDRKSGAEGAIDGSTNSPPETFQTNSADFVALSDAVKKKMAIQAAKDQRKEGKAKARKAAAAAKASKPNTVIYLGHVPHGFFEDQMRAFFGQFGDVKHIRLSRSKKTGKSRGYAFLEFAEAEVASVVAETMQGYYLGGRKLVCEVLPPSRVHPKLFLDADKKWRVIPWRQLEKDRRTAPKTEEEARKCLSRLVRGDNRKRKRLAGLGIQYDFPGYEATASQAYVKRKKDDLAVEAEKSEGKSGAGGLARRVRGQGGDNGGGKGKRRMTEPEAEAAPEEKVKGNTSSKKKAKVGTLDDVSSTPKGGKRVEKETGGAAATPSTTGKKSHAVLDADQVVKKSAAQTGGVGGKKGGKKGAASKKK 407
MALKAKKPKDTSLDAGGGKEKTGQKKEVDSRLAKPVKGVKKGSNDAEDRKSGAEGAIDGSTNSPPETFQTNSADFVALSDAVKKKMAIQAAKDQRKEGKAKARKAAAAAKASKPNTVIYLGHVPHGFFEDQMRAFFGQFGDVKHIRLSRSKKTGKSRGYAFLEFAEAEVASVVAETMQGYYLGGRKLVCEVLPPSRVHPKLFLDADKKWRVIPWRQLEKDRRTAPKTEEEARKCLSRLVRGDNRKRKRLAGLGIQYDFPGYEATASQAYVKRKKDDLAVEAEKSEGKSGAGGLARRVRGQGGDNGGGKGKRRMTEPEAEAAPEEKVKGNTSSKKKAKVGTLDDVSSTPKGGKRVEKETGGAAATPSTTGKKSHAVLDADQVVKKSAAQTGGVGGKKGGKKGAASKKK
Sbjct: 1 MALKAKKPKDTSLDAGGGKEKTGQKKEVDSRLAKPVKGVKKGSNDAEDRKSGAEGAIDGSTNSPPETFQTNSADFVALSDAVKKKMAIQAAKDQRKEGKAKARKAAAAAKASKPNTVIYLGHVPHGFFEDQMRAFFGQFGDVKHIRLSRSKKTGKSRGYAFLEFAEAEVASVVAETMQGYYLGGRKLVCEVLPPSRVHPKLFLDADKKWRVIPWRQLEKDRRTAPKTEEEARKCLSRLVRGDNRKRKRLAGLGIQYDFPGYEATASQAYVKRKKDDLAVEAEKSEGKSGAGGLARRVRGQGGDNGGGKGKRRMTEPEAEAAPEEKVKGNTSSKKKAKVGTLDDVSSTPKGGKRVEKETGGAAATPSTTGKKSHAVLDADQVVKKSAAQTGGVGGKKGGKKGAASKKK 407
BLAST of EWM26247.1 vs. NCBI_GenBank
Match: gi|672817465|gb|KFH62370.1| (hypothetical protein MVEG_11579 [Mortierella verticillata NRRL 6337]) HSP 1 Score: 188.734 bits (478), Expect = 2.582e-52 Identity = 76/151 (50.33%), Postives = 115/151 (76.16%), Query Frame = 0
Query: 117 VIYLGHVPHGFFEDQMRAFFGQFGDVKHIRLSRSKKTGKSRGYAFLEFAEAEVASVVAETMQGYYLGGRKLVCEVLPPSRVHPKLFLDADKKWRVIPWRQLEKDRRTAPKTEEEARKCLSRLVRGDNRKRKRLAGLGIQYDFPGYEATASQ 267
V+YLG +PHGF+E+QM+A+F QFG V +RLSR+KKTGKS+ YAF+EFA EVA +VA+TM Y L G +L C+ L PS++HP +F+ A+KK++ IPW+++ KD+ A K+ + ++ +L++ ++ KR +LA LGI+YDFPGY+A+ +
Sbjct: 231 VVYLGRIPHGFYEEQMQAYFTQFGKVLRLRLSRNKKTGKSKHYAFIEFASQEVADIVADTMDNYLLFGHQLKCKALQPSQIHPAMFVGANKKFKAIPWQKISKDKHNADKSASQIKQVSKKLLKNESAKRAKLADLGIEYDFPGYKASVVE 381
BLAST of EWM26247.1 vs. NCBI_GenBank
Match: gi|1032644962|gb|OAQ26284.1| (FHA domaininteracting nucleolar phospho protein putat [Mortierella elongata AG-77]) HSP 1 Score: 181.8 bits (460), Expect = 1.401e-51 Identity = 75/151 (49.67%), Postives = 112/151 (74.17%), Query Frame = 0
Query: 117 VIYLGHVPHGFFEDQMRAFFGQFGDVKHIRLSRSKKTGKSRGYAFLEFAEAEVASVVAETMQGYYLGGRKLVCEVLPPSRVHPKLFLDADKKWRVIPWRQLEKDRRTAPKTEEEARKCLSRLVRGDNRKRKRLAGLGIQYDFPGYEATASQ 267
V+YLG +PHGF+EDQM A+F QFG V +RLSR+KKTGKS+ YAF+EFA EVA +VA+TM Y L G +L C+ L P+++HP +FL A+KK++ IPW+++ K++ A K+ + ++ +L++ ++ KR +LA LGI Y+FPGY+A +
Sbjct: 70 VVYLGRIPHGFYEDQMNAYFSQFGKVLRLRLSRNKKTGKSKHYAFIEFASQEVADIVADTMDNYLLFGHQLKCKALQPTQIHPAMFLGANKKFKAIPWQKISKEKHNAEKSAAQMKQVAKKLLKNESAKRAKLAELGIDYEFPGYKANIQE 220
BLAST of EWM26247.1 vs. NCBI_GenBank
Match: gi|1183354286|gb|ORX82090.1| (RNA-binding domain-containing protein [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 182.185 bits (461), Expect = 3.802e-51 Identity = 86/176 (48.86%), Postives = 118/176 (67.05%), Query Frame = 0
Query: 89 QAAKDQRKEGKAKARKAAAAAKAS--KPNT-VIYLGHVPHGFFEDQMRAFFGQFGDVKHIRLSRSKKTGKSRGYAFLEFAEAEVASVVAETMQGYYLGGRKLVCEVLPPSRVHPKLFLDADKKWRVIPWRQLEKDRRTAPKTEEEARKCLSRLVRGDNRKRKRLAGLGIQYDFPGY 261
A D + E K K + KA K +T VIYLG +PHGF+ED+MRA+FGQFG V +RLSR+KKTGKS+ YAF+EF +VA +VAETM Y L G L C+V+P ++HPKLF A+KK++VIPW ++ ++ PKT E + + +L++ + + R +L LGI YDFPGY
Sbjct: 86 HIALDPQDEAKLKKKLEQLDQKAHTEKVDTGVIYLGRIPHGFYEDEMRAYFGQFGTVTRLRLSRNKKTGKSKHYAFIEFKSMDVAEIVAETMNNYLLYGHLLKCKVIPEDKLHPKLFDGANKKFKVIPWNKIAREEHNKPKTRESRNRVVKKLLKKEAKTRAKLQELGIDYDFPGY 261
BLAST of EWM26247.1 vs. NCBI_GenBank
Match: gi|1183504461|gb|ORZ28044.1| (hypothetical protein BCR41DRAFT_317809 [Lobosporangium transversale]) HSP 1 Score: 183.341 bits (464), Expect = 1.135e-50 Identity = 76/151 (50.33%), Postives = 111/151 (73.51%), Query Frame = 0
Query: 117 VIYLGHVPHGFFEDQMRAFFGQFGDVKHIRLSRSKKTGKSRGYAFLEFAEAEVASVVAETMQGYYLGGRKLVCEVLPPSRVHPKLFLDADKKWRVIPWRQLEKDRRTAPKTEEEARKCLSRLVRGDNRKRKRLAGLGIQYDFPGYEATASQ 267
V+YLG +PHGF+E+QM+A+F QFG V +RLSR+KKTGKS+ YAF+EFA EVA +VA+TM Y L G +L C+ L PS++HP +F A+KK++ IPW ++ K++ A KT ++ + +L++ + KR +LA LGI YDFPGY+A+ +
Sbjct: 189 VVYLGRIPHGFYEEQMKAYFSQFGKVLRLRLSRNKKTGKSKHYAFIEFASQEVAEIVADTMNNYLLFGHQLKCKALQPSQIHPAMFSGANKKFKAIPWLKIAKEKHNAEKTTVQSNQIKKKLLKNEAAKRAKLAELGIDYDFPGYKASVPE 339
BLAST of EWM26247.1 vs. NCBI_GenBank
Match: gi|156397983|ref|XP_001637969.1| (predicted protein [Nematostella vectensis] >gi|156225085|gb|EDO45906.1| predicted protein [Nematostella vectensis]) HSP 1 Score: 178.333 bits (451), Expect = 1.632e-50 Identity = 87/191 (45.55%), Postives = 125/191 (65.45%), Query Frame = 0
Query: 86 MAIQAAKDQRKEGKAKARKAAAAAKASKPNTVIYLGHVPHGFFEDQMRAFFGQFGDVKHIRLSRSKKTGKSRGYAFLEFAEAEVASVVAETMQGYYLGGRKLVCEVLPPSRVHPKLFLDADKKWRVIPWRQLEKDRRTAPKTEEEARKCLSRLVRGDNRKRKRLAGLGIQYDFPGYEATASQAYVKRKKDD 276
+A+ + K + E K K K P VIYLGH+PHGFFE++++ FF QFG V IRLSRSKK+ +S+GYAF+EFA EVA + A+TM Y + GR L C+V+P ++HP+L+ +++K+R +P RQ++ DR KT+ E K +S L++ + RKRK+L LGI Y+FPGY A + K K+ D
Sbjct: 17 LALDSDKQKEFEDKVKKIKPKGDEDELSPG-VIYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFACDEVAKIAADTMHNYMMFGRLLKCKVVPNEKIHPRLWKGSNRKFRHVPRRQIDIDRHNKVKTQNEHEKQVSNLLKKETRKRKKLEKLGIPYEFPGYAGEAEETQPKHKRFD 206
BLAST of EWM26247.1 vs. NCBI_GenBank
Match: gi|1028563576|gb|OAJ32768.1| (hypothetical protein BDEG_28648 [Batrachochytrium dendrobatidis JEL423]) HSP 1 Score: 181.415 bits (459), Expect = 8.121e-50 Identity = 82/172 (47.67%), Postives = 118/172 (68.60%), Query Frame = 0
Query: 117 VIYLGHVPHGFFEDQMRAFFGQFGDVKHIRLSRSKKTGKSRGYAFLEFAEAEVASVVAETMQGYYLGGRKLVCEVLPPSRVHPKLFLDADKKWRVIPWRQLEKDRRTAPKTEEEARKCLSRLVRGDNRKRKRLAGLGIQYDFPGYEATASQAYVKRKKDDLAVEAEKSEGKS 288
V+YLGH+PHGF+E +M ++F QFG+V +RLSR+KKTG S+ YAF+EF + EVA +VA+TM Y + R L C+V+ ++H F D+K+RVIPW +L++DR+ PKT EE ++L + D++KRK+L LGI Y+FPGY A++ +K LA AEK+ KS
Sbjct: 185 VVYLGHIPHGFYEAEMLSYFSQFGEVTRLRLSRNKKTGHSKHYAFVEFKDIEVAKIVADTMDNYLMFNRMLKCKVVSADKLHADTFKGCDRKFRVIPWNKLQRDRQNKPKTAEEWDTIQTKLEKRDSKKRKQLEELGIDYEFPGYAGAAAE-----RKAKLAASAEKTLKKS 351
BLAST of EWM26247.1 vs. NCBI_GenBank
Match: gi|983146233|gb|KWU44203.1| (RNA-binding domain-containing protein, partial [Rhodotorula sp. JG-1b]) HSP 1 Score: 175.637 bits (444), Expect = 1.538e-49 Identity = 84/175 (48.00%), Postives = 121/175 (69.14%), Query Frame = 0
Query: 118 IYLGHVPHGFFEDQMRAFFGQFGDVKHIRLSRSKKTGKSRGYAFLEFAEAEVASVVAETMQGYYLGGRKLVCEVLPPSRVHPKLFLDADKKWRVIPWRQLEKDRRTAPKTEEEARKCLSRLVRGDNRKRKRLAGLGIQYDFPGYEATASQAYVKRKKDDLAVEAEKSEGKSGAGG 292
IYLG +P GF+ED+MR++F QFG+V +RLSR+KKTG S+ YAF+EF A VA +V ETM Y L G LVC+V+P ++HPKL++ A++K+RV+P + + RR PKT+E+ K RL+ +++KRK+LA LGI+YDF GY + V+ K ++ A K +G+ AGG
Sbjct: 3 IYLGRIPKGFYEDEMRSYFSQFGEVTRLRLSRNKKTGASKHYAFIEFKYASVAQIVQETMDNYLLLGHILVCKVVPDDQIHPKLWVGANRKFRVVPKSRKDAARRNKPKTDEQKEKIKKRLLSREDKKRKQLAELGIEYDFAGYRGAGKEEQVEAKVEEAAKPTPKKKGRKSAGG 177
BLAST of EWM26247.1 vs. NCBI_GenBank
Match: gi|568009610|gb|ETL83810.1| (hypothetical protein L917_16289, partial [Phytophthora parasitica]) HSP 1 Score: 171.014 bits (432), Expect = 6.340e-47 Identity = 99/255 (38.82%), Postives = 146/255 (57.25%), Query Frame = 0
Query: 17 GGKEKTGQKKEVDSRLAKPVKG-VKKGSNDAEDRKSGAEGAIDGSTNSPPETFQTNSADFVALSDAVKKKMAIQAAKDQRKEGKAKARKAAAAAKA-------SKPNTVIYLGHVPHGFFEDQMRAFFGQFGDVKHIRLSRSKKTGKSRGYAFLEFAEAEVASVVAETMQGYYLGGRKLVCEVLPPSRVHPKLFLDADKKWRVIPWRQLEKDRRTAPKTEEEARKCLSRLVRGDNRKRKRLAGLGIQYDFPGYEA 263
GG + K+ ++ ++K + ++K D D S +E +TN TF S D V L A + + K +RK + ++AAA AK ++P+ VIYLG +PHGF+E QM FF QFG V+ +RLSR+K+TG S+ YAF++F E EVA +VA TM Y L L C ++P VH ++F+ A+K+++ +P + + ++R A KT E+ RLV + +KRK L LGI YDFPGYEA
Sbjct: 7 GGVCHSSDKRLAETMVSKKIAAQLEKLQGDEWDSDSDSE-----TTNVVSNTFDA-SNDLVTLPTAAEAAASASTGK-KRKSKMQRKKEAAALAKVQQEEKKKNQPSNVIYLGRIPHGFYEKQMLGFFKQFGTVRRVRLSRNKRTGNSKHYAFIQFDEPEVAQIVANTMNEYRLFDHTLSCHIVPSHAVHERMFIGANKEFKPLPRQAINRNRHNAEKTYEQTVINNKRLVTKERQKRKVLKALGIDYDFPGYEA 254
BLAST of EWM26247.1 vs. NCBI_GenBank
Match: gi|1183456103|gb|ORY80162.1| (RNA-binding domain-containing protein [Neocallimastix californiae]) HSP 1 Score: 171.014 bits (432), Expect = 6.431e-47 Identity = 74/149 (49.66%), Postives = 104/149 (69.80%), Query Frame = 0
Query: 117 VIYLGHVPHGFFEDQMRAFFGQFGDVKHIRLSRSKKTGKSRGYAFLEFAEAEVASVVAETMQGYYLGGRKLVCEVLPPSRVHPKLFLDADKKWRVIPWRQLEKDRRTAPKTEEEARKCLSRLVRGDNRKRKRLAGLGIQYDFPGYEATA 265
VI+L H+PHGF+E QM+ +F QFGDV +RLSR+KKTGKS+ YAF+EF A+VA +VAETM Y L L C V+P ++ P F+ A+KK++VIPW ++E+ ++ K+ + RK + L++ D +KRKRL LGI Y+F GY A
Sbjct: 107 VIFLSHIPHGFYEKQMKEYFTQFGDVTRLRLSRNKKTGKSKHYAFIEFKNAQVAQIVAETMNNYLLYSHVLKCSVIPEDKLDPNTFVGANKKFKVIPWAEIERKKKQELKSGAKYRKNVKNLLKKDEKKRKRLQELGIDYEFNGYAANV 255 The following BLAST results are available for this feature:
BLAST of EWM26247.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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