rna4461, rna4461 (mRNA) Nannochloropsis gaditana

Overview
Namerna4461
Unique Namerna4461
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1293
Alignment locationCM002463.1:646868..648484 -

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Properties
Property NameValue
Productconserved unknown protein
Orig transcript idgnl|cribi|Naga_100025g29.7503.mrna
Orig protein idgnl|cribi|Naga_100025g29.7503
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:646868..648484 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100025g29gene4303Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4461rna4461-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26212.1cds4450Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4461 ID=rna4461|Name=rna4461|organism=Nannochloropsis gaditana|type=mRNA|length=1293bp
ATGACGGACGGCGACATCCTGGCTTGCTTGAGAAGAAAACGAAGCATTGC
GCCGGACGTGCCGGTAGACCCTCCAAACGCACAACCTCCCCCCTCTCCCT
CCTTGTCACTTCCATCGCCCCACTTCCTTCGCCGGCTGCGGCATACCAAC
CCACCATGTCTCCTCTTGGCTATTGTTGTCCTCCTGTTGAATTTCGTTTG
CGCAGTTCATGCTGCTCTTGAAAGTGGAAACAACGGAGGGCGCCGCCTCG
TCGAAGTCTATCATCCTTTCCCGTATACACCTGAAGGCCTCATTCGACAG
CTCACGCACGCCCAGCAAGCCGTTAATAAAGGAAGTTTAGCCATGGCTCT
CGTAGCCAAAGACGGGGTTGTCCTTGTTGGGTCACGTCGTAACCTATCTC
CTCTACTGGTCGGCCCTACACCCAAAATCGGTCAGATGGACCAGCATATT
GCGTACGTGATGGCAGGCCTGGTGCCAGACGGGCGATACGTTGTTCGACG
AGGCCGTCTACTCTCACAACAGCATTGGTTTGTGTACGGCGAAGAAGTAG
GACTTCCAGGTTTGCTAATGGACCTGAGCAAGGTCTTGACGTCTGCTCAC
TACCGTCTACCACCCGAGGGTCCGCTTGGAGAAAAGAAAGGCGCTTCTTT
CTTCGAGGAAATCAGGCCGAAGCCGTCGGTAGACCCGATTGGGGATGCAG
AGGCGGAGCTGAAAAAAGAAGGCCTACCAGCTCGCTATTTTGGGGTGGGT
TTCTTGTTCGCAGGGCCGCTGACTGCCAGCAGGGCTCCGACACCTGTAGA
TGAGATGAACGGGGGCGACAATCCTGCGTCGTCGGCCGACGTAGACACAA
CCAGGCCTACGGAGGAAGCGTCTTCGACCTACCCCCCTTGGGCGGTGTAC
GAGATGGGGCCCTCCGGACTCTTCGTCCGCTGGTCCGCCCGGGCAATCGG
AGAGCGTGGTGATCGCGCCGAGGCCCTCCTGGAGTCCCGGTACCGCCCAG
GATTGACCTTAGAGGAGTGTCAACGCCTGGCGATCCATATATGTGACTCC
GTCATGGAAGATTCCTCCAGCTCGCGCGTCCAGACTCGGCCGCAGCACAG
GCACGAGCAGGCGGGGAGATCCCAAGTCACGGACCCCTCGAGAGAGACCT
GCGCCGTCTTCCCCTTCCCTGACCAGCTGGAGATGGCCTCGGCTGACACT
GGACAGCCGCCAGGGACAGGGAATTTTCATCGGCCTACGCAGCAATTTAA
TGAAACATCAAAGCCCTCAATACATGTGAAAAGCAACAACTGA
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protein sequence of rna4461

>rna4461-protein ID=rna4461-protein|Name=rna4461|organism=Nannochloropsis gaditana|type=polypeptide|length=268bp
MQVAQPLWPAYPLRVMANGPSYHETQRRLCCGTHTLNNLYQHHWIDTATM
DHLASSLGAADKASSGQHKGSGWLESALRRASDPFAPTAYRSWVPGLGGY
DVSVLVEALKMRNARFDMHVLKNGRLEEDLAVLHVRLSGVAGRGPGATED
EGRGERAIGVILNRKSRTWAARWLLEGRHWLALIPWPSGSAASGGEQIRW
WMMDSKLPAPVLVGGAEHAVASVREAVCGEEGQAFLVVEAVGAGERGSGG
RGVGGGEESHGGNRSDGE
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mRNA from alignment at CM002463.1:646868..648484-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4461 ID=rna4461|Name=rna4461|organism=Nannochloropsis gaditana|type=mRNA|length=1617bp|location=Sequence derived from alignment at CM002463.1:646868..648484- (Nannochloropsis gaditana)
GCGAATAGACGAGGGGAGTGTCATGTATTTCCACACGGAGCCGTCACAAG
AAATGGCGAGCTCCGCGAGTGGAGCGACGATGACATGACCAAGTCCGCTG
TGCTCTTGCTGGTTTTTGCCTCCCTCGAGCAGACATGCACGTCGTGGAAA
TATTCAACCCAGCCCTCTGACAAGATTTTCATGCCATTCCTAGGTGCGCG
CGGTTTATAGTCATGCAGGGCGAGGAGCTGTCCTGCCTATAGTGTGCTCG
TGAAGCGAGGGCAAGAGCAAAATGCATGTAAGCAAAATTTTATTTCTCCG
ATGCAAAGTCAAGCGTACCAAGAGAAAGGGAGGGTCAACAGCAGCTGTGG
GTGCCGTCCTTCGTCGTGCATGTGCATGACAGCAAGGGACGGGACGTCGT
GGGGGCCCTCTGAGAGTCTTTTTCGGATCCCCCAGCTTGCCCTAGTGCCT
GTCCACCTCCAAAAGTGAAGGCGACATCATAGTGCATGCAGGTGGCACAG
CCCTTATGGCCAGCATACCCCTGTGAGTCTCCATTTAGTCGCAAAATTCG
TGGTCCTTGTCCTCAGACAACGACAGCTTGGGCGTGCATTCGCAGTGTAA
TTTGGCTTGCTCCCCCCGAGTGCCGTGTGAGCATGCCTGTGCAAATGAAG
TCGCGGTGAAGTGGCGGTATCTCAACCCGACACTTTGGTCCTATTCCCAT
TATATTCTTCTTGTGATGTCAGTGAGAGTGATGGCGAATGGACCCTCCTA
CCACGAAACCCAGCGTCGGCTCTGTTGCGGAACCCACACCCTCAATAACC
TCTACCAACACCATTGGATCGACACGGCCACGATGGACCATCTGGCGAGC
TCGCTTGGAGCGGCTGATAAAGCTAGCAGTGGCCAACACAAGGGCTCGGG
CTGGCTAGAGAGCGCCCTGCGCCGCGCGTCCGACCCGTTCGCCCCCACGG
CCTACCGGAGTTGGGTCCCGGGCTTGGGAGGCTACGACGTGTCGGTGCTG
GTGGAGGCCTTGAAGATGCGCAACGCGCGCTTCGACATGCACGTGCTGAA
GAACGGGCGTTTGGAGGAGGACCTGGCCGTCTTGCATGTCCGGCTCTCTG
GCGTGGCGGGGCGGGGACCGGGAGCGACCGAGGACGAGGGTCGAGGAGAG
CGGGCGATAGGCGTCATCTTGAATCGGAAGTCACGCACGTGGGCAGCGCG
CTGGCTCCTGGAAGGGCGACATTGGTTGGCGCTTATTCCTTGGCCTTCAG
GGTCGGCTGCGTCGGGAGGGGAGCAGATCAGGTGGTGGATGATGGACTCG
AAGCTCCCGGCGCCTGTGCTTGTCGGCGGGGCGGAGCACGCGGTGGCTTC
CGTAAGGGAGGCAGTGTGTGGGGAGGAAGGGCAGGCCTTCCTGGTGGTGG
AGGCCGTGGGGGCGGGGGAAAGGGGTTCGGGAGGAAGGGGGGTGGGAGGG
GGGGAGGAATCTCATGGAGGAAACCGAAGCGACGGCGAGTGATGAATCCT
CGTCTTGTACAGGCCATAAGGACTCAGACAGTCAGCGTCCGTGTAAATAG
CTTCGGAACACACCGCTTCTTGCACCCACTTATAATGCAAAAGAAAGCTT
AGGATGGACCGGTGCCA
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Coding sequence (CDS) from alignment at CM002463.1:646868..648484-

>rna4461 ID=rna4461|Name=rna4461|organism=Nannochloropsis gaditana|type=CDS|length=1614bp|location=Sequence derived from alignment at CM002463.1:646868..648484- (Nannochloropsis gaditana)
TGAGAGTGATGGCGAATGGACCCTCCTACCACGAAACCCAGCGTCGGCTC
TGTTGCGGAACCCACACCCTCAATAACCTCTACCAACACCATTGGATCGA
CACGGCCACGATGGACCATCTGGCGAGCTCGCTTGGAGCGGCTGATAAAG
CTAGCAGTGGCCAACACAAGGGCTCGGGCTGGCTAGAGAGCGCCCTGCGC
CGCGCGTCCGACCCGTTCGCCCCCACGGCCTACCGGAGTTGGGTCCCGGG
CTTGGGAGGCTACGACGTGTCGGTGCTGGTGGAGGCCTTGAAGATGCGCA
ACGCGCGCTTCGACATGCACGTGCTGAAGAACGGGCGTTTGGAGGAGGAC
CTGGCCGTCTTGCATGTCCGGCTCTCTGGCGTGGCGGGGCGGGGACCGGG
AGCGACCGAGGACGAGGGTCGAGGAGAGCGGGCGATAGGCGTCATCTTGA
ATCGGAAGTCACGCACGTGGGCAGCGCGCTGGCTCCTGGAAGGGCGACAT
TGGTTGGCGCTTATTCCTTGGCCTTCAGGGTCGGCTGCGTCGGGAGGGGA
GCAGATCAGGTGGTGGATGATGGACTCGAAGCTCCCGGCGCCTGTGCTTG
TCGGCGGGGCGGAGCACGCGGTGGCTTCCGTAAGGGAGGCAGTGTGTGGG
GAGGAAGGGCAGGCCTTCCTGGTGGTGGAGGCCGTGGGGGCGGGGGAAAG
GGGTTCGGGAGGAAGGGGGGTGGGAGGGGGGGAGGAATCTCATGGAGGAA
ACCGAAGCGACGGCGAGTGAATGCAGGTGGCACAGCCCTTATGGCCAGCA
TACCCCTTGAGAGTGATGGCGAATGGACCCTCCTACCACGAAACCCAGCG
TCGGCTCTGTTGCGGAACCCACACCCTCAATAACCTCTACCAACACCATT
GGATCGACACGGCCACGATGGACCATCTGGCGAGCTCGCTTGGAGCGGCT
GATAAAGCTAGCAGTGGCCAACACAAGGGCTCGGGCTGGCTAGAGAGCGC
CCTGCGCCGCGCGTCCGACCCGTTCGCCCCCACGGCCTACCGGAGTTGGG
TCCCGGGCTTGGGAGGCTACGACGTGTCGGTGCTGGTGGAGGCCTTGAAG
ATGCGCAACGCGCGCTTCGACATGCACGTGCTGAAGAACGGGCGTTTGGA
GGAGGACCTGGCCGTCTTGCATGTCCGGCTCTCTGGCGTGGCGGGGCGGG
GACCGGGAGCGACCGAGGACGAGGGTCGAGGAGAGCGGGCGATAGGCGTC
ATCTTGAATCGGAAGTCACGCACGTGGGCAGCGCGCTGGCTCCTGGAAGG
GCGACATTGGTTGGCGCTTATTCCTTGGCCTTCAGGGTCGGCTGCGTCGG
GAGGGGAGCAGATCAGGTGGTGGATGATGGACTCGAAGCTCCCGGCGCCT
GTGCTTGTCGGCGGGGCGGAGCACGCGGTGGCTTCCGTAAGGGAGGCAGT
GTGTGGGGAGGAAGGGCAGGCCTTCCTGGTGGTGGAGGCCGTGGGGGCGG
GGGAAAGGGGTTCGGGAGGAAGGGGGGTGGGAGGGGGGGAGGAATCTCAT
GGAGGAAACCGAAGCGACGGCGAGTGAATGCAGGTGGCACAGCCCTTATG
GCCAGCATACCCCT
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Synonyms
Publications