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Properties
| Property Name | Value |
|---|
| Product | histone family protein dna-binding protein |
| Orig transcript id | gnl|cribi|Naga_100025g36.7531.mrna |
| Orig protein id | gnl|cribi|Naga_100025g36.7531 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:630613..632119 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4454 ID=rna4454|Name=rna4454|organism=Nannochloropsis gaditana|type=mRNA|length=1931bp
GGAGTTTCCTCAACTTGACCCCTCGCGGCCTTAGCTCAACTCAATCGTAC
CAAAGCCATCCTTCCCTCAGGAATGCCATACCGCGGATACACACACACAG
GATCACTTAAAAGCATAGCATGCCAGTGCTGCAAGATGAACGTCAGCATC
ACTCGTCGGAAACGTTCTCGGGGTCCAGCTGTCCGAGCCCTCCGTCACCT
CCCCTCTCTCCACCTGCTCTACTTGTTTCAAGTGCTGCCGCAGAGGAATG
CGCACGAAAGACATCGAATCATTCAGCAAGATTGCAAGATTTGTCGGAGG
TATCCATGAATCCCGAAAACGTACAGGCTGAGGAGGAAGAGGACGGGGGG
CAGCCACAGTGCGCTCCGGAAGCGGGACCTTATCAGGCTGCAGGTAGCCT
CGGCAAGCAACGTAGAGCTGTTTCGTCCCTCAAGTTCTCAGGCTCCGGAG
AGCTTCTGGCCGCAGCCTCGGCTGACACGACCATCAGCATATGGGACCCG
AAAAAGCGATTGCTAGTGAGGGAGTTGAAAGGGGGTCATACGCAAGGCGT
CTCCGATGTGGCATGGGCGCGCGACAGCCAATATCTTGCCTCTGCTAGCG
ACGACAAGACTGTCCGGATCTGGGACACGGAGACCGGCCAGGAATTAGGG
AGGTTTATCGGGCATACGGGGTACGTGTTTTGCGTGACTTTCAATGCTCA
AGGCTCCCTTCTGGCCTCGGGCTCGGCCGACGAGAGTGTCCACCTCTGGG
ACTTGCGGGCCGGGAGCTGCTTGCGGACGCTGGCGGCACACGCTGAGCCC
GTGACGGGGGTCGATTTTAACGAAGAGGGCACGTGTTTGGTCTCGGGATC
GTACGACGGCCTGGTGCGGCTGTGGAACGTAGGTATGGGGCACTGCCTCA
AGACCCTCTTCGCTGAGGGGGCGCCCGCCGTCTCCCACGTGAGGTATGCA
CCCAACGGGAGAAGTGTCCTGGTTTCCACGTTGGATTCGACCGTCAGGCT
CTGGAAGGTGGCCAGTCCCAGTGCCGTGACGAAGACCTATCAAGGCCATC
AAAACCTGCGGCTTTGTACCTTCGCTTGCTATTGCGCACCGGACGGGGCG
GCGGCTTCGGGGCAGGGACATAAGAATGGGCCTCAATATGTATCTAGCGG
ATCCGAGGACGGCAAGGTTTATGTGTGGGATGTGCAAAGCCAGGCTCTCG
TTCAGACGCTGGGCGGGCATCAGGATGCGGTGTTGAGCCTAGCAGCCCAC
CCCACCGACGGAGTCTTGGCCTCGGGGGGAACGACAGCAGACAGGTCGAT
ACGGCTTTGGCGCCCACGATGTAACGGGGCCGATTGAAAGTGAAATTACG
GTTTGGCCGATTGAAAGTGAAATTACGGTTTCGGATGTGTGCAGGTCGGG
AGGGGCTGGCAGCCGCAGCGAAGAAAAGCTGGGGTCAGTGTTGTGGAGAA
CGGAGACTGGCGCGGCCTCCACGAATGTACAAAGAAATTAGAAACATGCA
AGTATCGAACATGTGGGCTTCTTGCTTGATTTGCATGCGGACGGCGGTTT
GATGCATAGCTTTCACGTAAGAGTCGTCGTTTTAAGCCTGATGGCAGCAT
GAGATGCAGCGGCAGCCGCACCGTGACATGCGCACAGAGGGGTGGACTGT
TCCTTAGGAACCTGGCCAGGGATAACACGTCCGAAGGAAAGCATGCCGCC
CGAAACCCGTCAGCCTTGGGTGGGGGTAACAGGACCTGCATGGTCTATTC
ACGTTGAGGGATTTTGATTCTTTCACGGGCGCTTATCACGAGCATGCCCC
ATGGCCGCAGTTTCACGGGCTTTCTAAAATTTAGCATCCTTTGTAGGCAA
AATGCCTTTTAATCGGCTACACGCCGTCTGCTCTCTATCCATCCACTCTA
TCTATGCATTCCCCTCAGGCGCTCTCGCACG back to topprotein sequence of rna4454 >rna4454-protein ID=rna4454-protein|Name=rna4454|organism=Nannochloropsis gaditana|type=polypeptide|length=140bp
MLRSSTSFFLLFLALTASIIHAFLHVNIPTPSRGQPLMMATKAETSLKKT
ELLDQVVQKSGVTKAVADKVLAAVTDSIAESMADGKKVSLVGFGSFGTSV
RSARMARNPRTGEPIQVPETTVATFAPSKVLKDKINHRAS back to topmRNA from alignment at CM002463.1:630613..632119+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4454 ID=rna4454|Name=rna4454|organism=Nannochloropsis gaditana|type=mRNA|length=1507bp|location=Sequence derived from alignment at CM002463.1:630613..632119+ (Nannochloropsis gaditana)
GCGGCAAGAGGCAGTCAGGTTATGCGTATCTAATGACTGCCTTGACGTAT
GGTCGGGCTGATtgcatcctccttcttcaattTTCGTCCCTTCCTGCAGA
CCCACCTTTTTCCTCGTTAGCATCATGCTtcgctcttccacctccttctt
cctcctctttttggcCTTGACTGCTTCCATCATCCATGCTTTCCTTCACG
TCAACATCCCAACGCCTTCCCGAGGACAACCACTTATGATGGCGACGAAA
GCCGAGACGGTACGTTCAGTAATGGGAAGATCAATcagggtgggacggag
agagatatgaggggaagggacgacGGCAGGAAAGGACCTGTCAGAGGCCT
TCTACGATCACTGTTACTTCAACACCCGACCCACTCGTACCAATCACAGT
CCTTGAAGAAGACTGAGCTCCTGGACCAGGTCGTGCAAAAATCGGGCGTG
ACCAAGGCAGTGGCCGACAAGGTTTTGGCTGCGGTCACTGACTCGATCGC
GGAGTCCATGGccgatgggaagaagggtgaGTGTGGGGGAAGCTTGAGGA
GAACATTTGCTATACACGTGAGTGAATGCCGTAAAAAGCGTTTATATGCG
AAGATGCGTAGCTCATATTCTTTCTTGAGCCGGAGGTGCACATTCGCCAT
CCTGACCCTCCGTGCCACTACATTCTCTCcctgcatccctccctctggca
GTGTCACTGGTGGGCTTCGGTTCTTTCGGGACGTCCGTGCGGTCGGCTCG
CATGGCTCGCAACCCGCGGACTGGCGAGCCCATCCAGGTGCCCGAGACTA
CTGTAGCCACTTTTGCGCCGTCCAAGGTACTCAAGGACAAGGTAGGTGCT
TTGCATCCCGGCAGTAATATGAGCAGGCGTGCAGAGTACACATCCATATT
CACGTGCTGACGATACCCGACGCACCGCCAGATCAACCACCGCGCCAGCT
AAACAGTAGAAGGGGCCGTGAAagcgatgacgaggaggcgtgaggaaagg
aaagggaggctgTCACAGCACAGACTGTTCACTACTTTTTGGACGGGAAT
GGGAACGCTGTAATTATGGGCTCTAAGACGAAGGCTggacggagaaggtg
gcAGCTTAGCGGTCTCGAGCCGCGAAGAGGGGATGGCGCCGGGGTGCTCT
AAATCTTCTAACCTGGCGTGCAGTGCGATGGTACGGTCAAGGGCGCATGA
CGTGCGAGAGggtaaaaaaggaggaacggggaaggtgggcgtGAAGGCGG
TTCGCAGGGGGCGACCTAGGCGACCTGCAAGAGAAGGCTCAAACCGACCA
GCTGCATGGGGGACACTCCAAAGAACACTAAGAAAAGACCTTTAGGATGC
ACGTGGGGGGTGACGCCGAGACGTCGGGCAACAACCTTTTTCCTTTGATC
CTCCTTACGTGAGATTGCACGTGGCATGCAGCCCtagcccctccgcccac
ccaGTCACTCCTCTAGGAGAAATTGTGTACCCGGCCATCCTGAAAGGATA
GCGTCCC back to topCoding sequence (CDS) from alignment at CM002463.1:630613..632119+ >rna4454 ID=rna4454|Name=rna4454|organism=Nannochloropsis gaditana|type=CDS|length=1692bp|location=Sequence derived from alignment at CM002463.1:630613..632119+ (Nannochloropsis gaditana)
ATGCTtcgctcttccacctccttcttcctcctctttttggcCTTGACTGC
TTCCATCATCCATGCTTTCCTTCACGTCAACATCCCAACGCCTTCCCGAG
GACAACCACTTATGATGGCGACGAAAGCCGAGACGTCCTTGAAGAAGACT
GAGCTCCTGGACCAGGTCGTGCAAAAATCGGGCGTGACCAAGGCAGTGGC
CGACAAGGTTTTGGCTGCGGTCACTGACTCGATCGCGGAGTCCATGGccg
atgggaagaaggTGTCACTGGTGGGCTTCGGTTCTTTCGGGACGTCCGTG
CGGTCGGCTCGCATGGCTCGCAACCCGCGGACTGGCGAGCCCATCCAGGT
GCCCGAGACTACTGTAGCCACTTTTGCGCCGTCCAAGGTACTCAAGGACA
AGATCAACCACCGCGCCAGCTAAATGCTtcgctcttccacctccttcttc
ctcctctttttggcCTTGACTGCTTCCATCATCCATGCTTTCCTTCACGT
CAACATCCCAACGCCTTCCCGAGGACAACCACTTATGATGGCGACGAAAG
CCGAGACGTCCTTGAAGAAGACTGAGCTCCTGGACCAGGTCGTGCAAAAA
TCGGGCGTGACCAAGGCAGTGGCCGACAAGGTTTTGGCTGCGGTCACTGA
CTCGATCGCGGAGTCCATGGccgatgggaagaaggTGTCACTGGTGGGCT
TCGGTTCTTTCGGGACGTCCGTGCGGTCGGCTCGCATGGCTCGCAACCCG
CGGACTGGCGAGCCCATCCAGGTGCCCGAGACTACTGTAGCCACTTTTGC
GCCGTCCAAGGTACTCAAGGACAAGATCAACCACCGCGCCAGCTAAATGC
TtcgctcttccacctccttcttcctcctctttttggcCTTGACTGCTTCC
ATCATCCATGCTTTCCTTCACGTCAACATCCCAACGCCTTCCCGAGGACA
ACCACTTATGATGGCGACGAAAGCCGAGACGTCCTTGAAGAAGACTGAGC
TCCTGGACCAGGTCGTGCAAAAATCGGGCGTGACCAAGGCAGTGGCCGAC
AAGGTTTTGGCTGCGGTCACTGACTCGATCGCGGAGTCCATGGccgatgg
gaagaaggTGTCACTGGTGGGCTTCGGTTCTTTCGGGACGTCCGTGCGGT
CGGCTCGCATGGCTCGCAACCCGCGGACTGGCGAGCCCATCCAGGTGCCC
GAGACTACTGTAGCCACTTTTGCGCCGTCCAAGGTACTCAAGGACAAGAT
CAACCACCGCGCCAGCTAAATGCTtcgctcttccacctccttcttcctcc
tctttttggcCTTGACTGCTTCCATCATCCATGCTTTCCTTCACGTCAAC
ATCCCAACGCCTTCCCGAGGACAACCACTTATGATGGCGACGAAAGCCGA
GACGTCCTTGAAGAAGACTGAGCTCCTGGACCAGGTCGTGCAAAAATCGG
GCGTGACCAAGGCAGTGGCCGACAAGGTTTTGGCTGCGGTCACTGACTCG
ATCGCGGAGTCCATGGccgatgggaagaaggTGTCACTGGTGGGCTTCGG
TTCTTTCGGGACGTCCGTGCGGTCGGCTCGCATGGCTCGCAACCCGCGGA
CTGGCGAGCCCATCCAGGTGCCCGAGACTACTGTAGCCACTTTTGCGCCG
TCCAAGGTACTCAAGGACAAGATCAACCACCGCGCCAGCTAA back to top
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