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Properties
| Property Name | Value |
|---|
| Product | ubiquitin ribosomal protein s27ae fusion protein |
| Orig transcript id | gnl|cribi|Naga_100025g47.7520.mrna |
| Orig protein id | gnl|cribi|Naga_100025g47.7520 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:606967..608702 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4444 ID=rna4444|Name=rna4444|organism=Nannochloropsis gaditana|type=mRNA|length=7146bp
ATGTCTTCTGCCGCCCCGAGCGCTGCGGGCAACGAGGAGGGCATATGCGT
GGCCATTCGGGCCCGTCCTCTGAGCAGCAGGGAGAAGATCCAGGGACAAC
GTGCGCTGTGGAGGTGCTTGCCGGCACACGATTCGATCACTTTGACGGGA
CCCGATGGAAACCCCTTGCCAGATCGCAGTCCGGGCCTGAGCTTCTTCAC
CTACGACAAGGTCTTCTCCGAGAATTCCAGCACCAGCGACGTGTACCACG
CCATCGGCCGGCCCATTGTCTCATCCGTGCTGCAAGGCTTCAATGGCACC
ATATTTGCGTACGGGCAGACCAGCTCAGGGAAGACGTACACCATGGTGGG
GGACGAGACCGGCGGGGAGGAGGGGGTCCTGCACCTGGCCGCCCGGGACA
TATTTCGCCTCATCTCCGAGACCAACGACCGGGACTTTCTCCTGCGCGTG
TCCTTCGTGGAAATTTACAACGAGAACATCCGCGACCTGCTCGACCCCGA
GACCCCATCCCTCTCGATCCGGGAGGATCCCCGCAAGGGCGTGTACCTGG
AGGCGCACGAGAGCATCATCACCGACTTCGACTCGATCATGACGGCGCTC
AAGACGGGATCCAGGCACCGACGCGTGGAGTCGACGGCCATGAACGAGCG
TTCCTCCCGTTCCCACACCATCTTCCGGATGATCGTGGAGAGGGATGGCG
ATGTGGACGGTGCCGTGCTGGTGGCCACCCTGAACTTGGTGGACCTGGCA
GGCTCCGAAAGCGTGCGACACACGGGGGCGACGGGCAACCGGGCCAAGGA
AGGAGGAAAAATCAACCAAAGCCTGCTCACGCTCAGCCGCGTCATCCACG
CGCTGGGCCAGGACGGAAGCGTGCACAAGGGCTTCCGGGACTCCAAACTC
ACCCGGATCCTCCAGCCCAGTCTGTCGGGGAACGCGAAGATGGCCGTCGT
GTGCTGCATCACGGCCGCCGAGAGGTACTTGGAGGAGACGCGGAGCACCC
TCCAGTTCGCCTCCAGGGCGAAAATGGTCCGAACACGGGCGGTCGTGAAC
GAGGTGCTCGATGACCGGGCGCAACTCAAGCGCCTGAAGAAAGAGCTACA
GGATCTCAAGGGCCGACAGCGGCAACTGGAGGAATGTGAGGCGGCCGGCG
GCCTGGGGGCAAGGGGGGGGGAAGGTGGTGGGGTCGACGAGGAGCAAATG
CACCGTTTGGAGGCGGAGAAGCAACTGATGACGGGGAAGGTGGAAGAACT
CGAAGCTGTGCGTGAGGAGCAGGCGAACAAAATCGCGCGCCTCAAGACGC
TGATTTTGCAGGGCGGGGGGTTGCTTGAGGCGACCGCGGAGACAGAGGGA
GCGGAGACGGGAGGCAAAATCCGTCGACCGAAACGGACGCGTGAGACGTG
GTGCCCGGGGGAGTCGGGCGTGCCCCTCCCACCGGGTGCCCTTGTCAAAG
GCTTGCGAGGATTAGCGCGTGAAGGGAGGGAAAGCGCGGAGTGTGGGGCT
TCCAGGGGGTCCGGGGCCAGCTCTCAGAGACCCCGCACGGAACTGCTGCA
GGACAGTGAAGTGGAGGAGGCGGGCGCTCGAGTCGTGGCGGGGGTGAGCG
GGCATGAGAAAGGCGTTTCGCCCATGTCTACTGAAGCCGAATGGAGGGAG
CAGGCGGCGGCGCTGGAGGAAATGGCACAGGTCCGGGAGGTACTTTCAGT
GTACAAGCGGCACTGCCAGGCAGAAGCAGGGAAAGAGGAAGAGAGCGAGG
CCCCTTCTTCTGTGCTTGAAACGATCAAGTCATTGGTCGCGATGGGCAAC
CAAGCGGCTTCCAGACCGTATCCCTGCCTGTATGGAGACATGCTCCACAA
GGAGGAGGAGGACGACCAGGAGGACGCCACGGTCCAACTCCCCTCCCTCA
GCGAAATGGAGAAGCTCGCGGCCGTGGTGGAAGACAAGGACCAGGAAGTC
GCGAGGCTCGTGGAAGAGCGCGACCAGCTCAAGACTGTCATTGCTGAGCA
AACAAAGGAATTGGACGCCGCCGTCACGGCCCTGGCGGATGTAAAAGCGG
CGGGAGCCCAAGGCCTAGGGGTCTCCCTCACGGACGACGACGGGGACGCC
ACCGTCTCGCTGGATCCTGAGGTGCAAGGGCTCATGACGAGCATGGCAGA
GCGAAACGCGGAATTGCGCGAGCTCCAAACTGCCTTGCAGGCGGCAGGAG
AGCGGGACCAGACCTACGAAGCCGAGGTAGCCTCGCTGCAGCAGCAGCTG
GCGGACGCGATCACCGCCATCGCGGGCATGATGGGTCCAGAGCAGGCAGA
CGCCCTTCGGAGGGAGCATGAGGACGCTGTGGGCAATCTGCAGGCGCGGG
TAGCGGAGCTGGAGGAAAGCCACGCCATGGCTGGGGCAGAAGTGGAAAGG
TTGGTGGCGAAACAGACCATGACGGTGGACAAAGCCGAGGTGGCGGCCCT
CGAGGCATCTCACGAAAGCGCTTGGGCGTCGTTGCAGGCGCAGCTTGCCG
AAGCCGAGGAGAGCAAAGCGGCCGCCTTGGCAGAAATAGAGGCTGTGCGT
GCGGCGCAAGCCGGCATGATGGGCGAGGAAGACTTGCACGCCCTCCGCAC
AAATCATGAAGACGCTCTTGCCGAGCTCCAACGCCGGGTCGTTGACGTGA
CAGAGCAGCACGCCGCTGCTAGTAAGGAGATTCAGAACTTGATTGCCGCT
CAAAGCGCGATGATCAGCAAGGAAGAGGTGCAACTTATACAGGAAAACCA
CGAAAGGGCCCTAGCGGAGATGCAAAGGCAGATTGCTGAGCTGGAGGAGG
CCAAGGGGGCGGCAATGGCAGAGGTGGACGACTTATCCACCGCTCGAAAG
ACCATGCTGGATGAAGATGAAGTGAACTGCCTCCGCCTCATCCATGAGCA
GGCGATAGAAGCGCTGCGGTCGGAGAACAAGGTGCTGGAGGAGGGGAAAA
TGCATGCGGTTGCCGAGATGGAGAAGGTGTTGGCAGCAAAAAGGGTAGCG
GAGGCACAAGTTGAGGAGCTTCGGGAAGAATTGTCTGGCATGGAAGCACA
AAGGGAAGAACTCCAGAGGCGCGTGGAAGTGGCTGATGCCGAGCACGCGG
CTTTCGAGGATGAGAAGGCTCGTCATGAATCGAGCTTGTGTGCGCTCAGG
TCGGAGATCGAGGCACTAAGAGAAGAGGGAAGGCAGCAGATGACCGCACT
TCAAGAGATGGTTGCAGTGTTGAAGGCGCAGGGCACGGAGGGGAGTGCCC
CATCCTGTGATAAGAATTTAACCGATCAGAGTAGTGAAGATGAGGGGCCC
GAGCAAGGAGCAGCGACGGTGACAGCATCACTACAAGAGCTGGTCCAGCG
TCTAACGGCCGCAAATGTGCAGCTCCAGGCGCGCGCCACAACGGCGGAAA
TAGAGGCTCGCGGGCACGCAGAAGAGAACGCGCACTTGAAGGGAAGGTTG
GGCAAGGTCCTGCGTCGACGCGTCTCCTCCCTTCCTCCGCTCAATGGGGC
GGAGGATGGGCACGTCCAGGTAATGCGCGCCGTGCGTCGCCGTCAAGGGG
GCGGGACGGGTGCGAGTAACGTCGAGTCCATGAGTCCATCAAAGCAATTG
AATGCCTTCGCTCCGGCCGAGGTAGAGGAGGAGGATGTCGAAGAGGCCAA
GGAGGCTTATGGCCTGGTGGAGCGCATGACAGACATGACGCATGAAATGG
AGCAGCTTGAAGAAGAATTGGAGGGCATGACAGAGGCACTCAAAGGTAAA
GAGGCCGAGCTGAGCGAGGTGAAGGCTGCGCTTGAATGCAAGGAGGAGGA
TTGTAAACGCCTCACTATCGAGCTGGAGACTGCCACGGAGACGGCACATG
GCGCTGAGGTGAAAGCAGCACAGAAAGTAGAGGAGCAAACCGAGCGATTA
GCAGCAGAATTAGTCACGGCTCGATCGGAAATCGAAGCACTTAAGACCAT
TCAACTAGCTTTTCCAAATGATGACGTTACAATCGCAATGCAGCAGCCTG
GTGAAGACCCGCCTGCCATCGCCGCACATGAAGAGGCCCTGGAGGAGGCA
AGCAAGCGGCTCGAGGCGTTGACTGCCGAGGTCGCTGTAGTCAAGGCCCA
GTTGGAGGAGAAAGACGGCGAAGTTGAAAAGCTTAGATGCGACGCTTTTC
ATTATCAGAGGCAATTTCAGCAGATTAAAGAGAAGGAGGTGGACGCCGAC
GGAAAGGAAGCTACCGTTGAGAACCAAAACAAGCTTCAGGGACAGCTTCT
CAATGAGAAAAACGCGCGAGCTGAGGCTGAGGGTCAACTGGCGTCAGCTA
TGGCGGACTTGAATCAGACCCGTGATGACTTGAGACGGGCGGTGGAGCGA
CTTCGGGCGAGTGACGAACTGTTGGAGGAGACGCAAGAGGCAGCACGCAA
AGAGCGTGAGCGAATCGAGAACGAGTTGGCCGTGCGAGAGGCGGAAGTGG
CCGCGCTCAAAGGGGAAGCCCAAGAGCTTTCCCGGGAGATCAAGCACGCA
CAGGAGTCCTTATCTCAAAGGCAGACGGCTGCGCAAGGGGCGGAGCAAAC
CGACGAATCCCTCCGCAAACGCCTGTCGCAAATTCAAACCCAGCTCGATC
TTGCGCAATCATTGGTGGATCGAAACGAAGCCCGCATCAAAGAGTTGGAG
GCGGAAAATTGCCGTGTCATTCGCGTGGCAGAAGACGACGTCCAAAAAAT
TCGAGGTGAGCTGGAGAGGGCGACAAAGGGACAGTCTGAAGCCACAGCAC
GTGAAGCAGAGGTACAGATGCTGCAGGAAGCACAGCAGGCGCTCACGAAA
AAGGTGACCCTGCTCCAAGCCGAAAGAGATGACGCTGAACAGCGTGCAAC
CGCTGCTGTTGACGCTTTAGAGAGTCTGGAGAAGGATGTGGAGGCCTCAA
AAGCCGCGCCGGCCGGTCAAGAAGGCCACGTCGGTGAAATGGAGAGGTTG
CGGGAAGAGCTTCAGAAGGCATGCGAGCAAGAAACCGAGAGTCGCCAAGA
AGTGCAAGAGCAGCGTGTGCGACAAAAGCGTTTGCAAAACGAGGTTGCGG
CTCTGCAAGACGAGTGCAGCCGGGCCCGCGATGAGCTCGAAAGTGTCAGG
GCGGAACTAGCGGCCGCCACAGCCGCACAGAGCGACCAATACAGGGCTGC
TGCTGCCGCGACCGCCGAGGTGGACATGCTCCGCGAGAAGTTGGCACAGG
CTCAAAACGCAGAGGACGCTCGCACTCTGGAGGTTCAGGAGGCGTGTGCT
TTAGCCAAGGCCCGGACGAACGAGTTCGCATTGGAGCTAGAGGGCGCGCA
GGCACGCCTCGCCGCAGTCGAAGCTGAGTTGGAGACGACGAAGGCTACGG
CGGAAAAGGCCGATAGATCTCGTGCTGAGCTCCTCAAGGAGTTAAACGCA
ATATTTGAGGCCAAATTCGAGGCAGAATCTAGGGTGGCGGCACTGGAGGA
CGAGATCCATCAACTCAAGAACAAGGTGGCTGAAGCAGCGGGCGCCGAAG
CGAAGGAGAGTGAGATCGAGGAACTTCGGGCAGCTTTGGCACAGAAAGAA
GACGATGGCTATCGTACAAAGCGGGAATTGGCCGAGTTAAAAGAAGCCGC
AGAGGCAGCCGAAGAGGCCATGGGGACGCAGCAGGCGGAAGTAGCTCGCC
TGCAAGCGGAAAGTCGTGCCCAGGATGAGCGCATCAGGAAATTGGACGCG
GAAAGTCGTGCCAAGGATGAGCGCATCAGGAAATTGGACGCGGTGAAACT
CACGACAGACCAGGTGGAGAAACTCAGAAAGATTAAGGCCGAGCACGCAC
AGTTCAGCACAACCAATAAGATGCTGAGAAAAGAATTAGAGGCCTTGCGT
CAGCAACAAGAAGCCAAGACAGTCGCCCCCGGCAGAAGCTCTGGACAGGC
TTTGGAGGCTCAGTCTCACACAATTTCGGATCTCATGGCCACTCGCGACA
GCCTCCAAGAAAAGTTACACGCGAGCATGGCAGCATGTCGAAAGCTGGAC
TTGGAGCGCCTGAGCGTGCAAGAGACGCTCCGAGAACTTCCTTTATTCGA
AAACGACGGGGAAGCAGGTCTGGGGTTTGAGGATGATGTTCCGGATGACC
TGGGGGTGGCGGTGGGGGTGGTGGTAGAAAAGGCGCGTTTGCGTCTCCTT
GCAAAGCATACCGGCGGTGCACATCAAGCGGAAGAAAGGGCAATGATGCT
CAAGGAAATTGAGACCCTGAAAGTGGAAAAAGACACCCTCAAAGCGCGGT
TGGAGGACACGGAGGCCGGGGTAGACGGAGCACACGAGGCAGAAGGTGTT
TTCCGGGAAAAGTTTGCCGCGGCCAGTGAGAAAATAAAGGCACTTGAGGA
AAGTAACGAAACGGCTGCGATGAAAATGAAAGAGGCGGAAATGGACAGAC
AAATGGCTGCGGAGGAGACCGCAAGGAATATCAGGTTTTTAGAGAAGGAA
AACTTGGAGCTGATGATGGAATTGAAGAAGCTGCGGGAACAAACGTCCAA
ATTACAGGCTGAATTAGATAGAGGAGCGTCATCAAGTGGATTGATATGCG
GTATAAACGCACTCAGACCTATTTACAGCCAAAACCCCAACGTGGACGCG
GGTTTGTCAACGTCTCAGGTGTCGGTGGCGGATGTGAATCCTCTTAAAGC
GGAGACAACCTCTTCCTCCAATATTTCGTGCCCTCTGCCGTCTTCTAAGA
CGCTTCCGGGAAAGACCTCTCTCTCAGCTGCGGACAAGGAAAATGTGATG
GCAGTCGGACAAAACCTGCTCCCCGTGAAACACGACGAGACGGCACCACC
CTTCCAGTCCCTTGCTGACGACGAGACGCATGACACCAACCAGTGCAAGC
AGTCGTAAGGAGCGACGAAAGGGGAAGTGGTGTGACGGACATAAATCGGG
CCTGAAGGGTGGACAAGTACCGGCATTTAATCGAGTTGGCTAGTAATGAG
GAACTAGAAAGAAAGGAAAGACAAGCCGGATCTAAACTGTCCCACATGGG
CGGAAGAGGTTGTGTGCCGAGTTTGGTCAGGAGTCGCTAGTTTTCGTGAC
TTTCCTGGATCTGTGCCATGGAGAGAATCGCTAGGGGGCGACCAATGCAT
AGATAGGGACAGACGACAACATCAAATCAAACGTATGGAGAGATGT back to topprotein sequence of rna4444 >rna4444-protein ID=rna4444-protein|Name=rna4444|organism=Nannochloropsis gaditana|type=polypeptide|length=175bp
MQIFVKTLTGKTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIFAGKQL
EDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSLARAGKVKGQTPKVEKQE
KRKTPRGRAKKRVLYSRRFLNVATGVGGKRLGPNRWVGREGEGIWQRRCG
RHECEAGIGKVLNNLGVCLHHALCT back to topmRNA from alignment at CM002463.1:606967..608702- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4444 ID=rna4444|Name=rna4444|organism=Nannochloropsis gaditana|type=mRNA|length=1736bp|location=Sequence derived from alignment at CM002463.1:606967..608702- (Nannochloropsis gaditana)
ATGGCAGAGAGCCAGCGGGGTCCGAGTCCCTTCTTTTTGTGCTGGCGCGA
GCTTCCATGGCTTATCATGTGTGACGATGTTTGAGATGATTCCAGCAAAT
TTTCTACGGGAGTGACGGATATTGCTGTCACCCTAGCACTTTACCGCAAG
TCCTGTAGAAATCTCCCGCTGCCATCCAACCTTCTGCCTTGCCGGCAGCA
CGCTGGGCTATCAAGGAAGGACTTTTTGTGATGGATAAGGCGCAAGACTG
TGGTCTTCGTGGCTCACAAAGGCATGAATGTTTCAATCTTAAAACATCGG
TTTGCTAAATTTTATTCTTCTCTGTGGTTGTGACCCTACGGAGGACGAGA
GTCTCCCTTCGCCCTACTCCATCGCCTTCTTGCCTCTGGACGAAAGGGTG
GGAAATAAGTGTACACGGCAACATCCTGTACAGACGAGCGTACTTGTCGC
ATTATCGAGTACTTAGCCCGCTCACTGCAAATATTTGTTTCATCCTCGCC
CTCCTTCGCGTTGATACATAAACAGCCATGCAAATTTTCGTTAAGACCCT
GACGGGCAAGACCATTACTTTGGACGTGGAGCCCAGCGACACCATTGAGA
ATGTGAAGCAAAAGATCCAGGACAAGGAGGGGATCCCCCCTGATCAGCAG
CGCCTCATTTTTGCCGGCAAGCAGCTCGAGGATGGGAGGACACTCAGGTG
GGTGATGGGAGAGGGAATTGGCGGTGGGAGGGGCACTGAGGAATGGCGCC
GGTAGAATGGTTTGGTCGATCAAGTTATGCGTGGAGTGCGGACGATGGAA
TATGTCTGTAGCTGAAGCTTGATAAAGCAATGCGTTGTGTATGGACCACG
GAATGCCTTTGTTACTGAAGCTTGAGGTGTCCTTTAGAAACGCTCTACAC
AGTCCCCTCCCTGACTGTCATGGCTGTAATCTGCTGGCTTGAGGGCTCAC
ACTTTCAATCTGTTGGTCCTCCACCGCCAATACGCCCCGATGCACGCCAT
CTTACATGAATGACTTCCCCTTCCCCCTACGTCTCCAGCGACTACAACAT
TCAGAAGGAGTCCACCCTACACCTGGTACTACGCTTGCGTGGAGGTGGCA
AAGTGCACGGCTCCTTGGCGCGTGCCGGTAAGGTGAAGGGCCAGACGCCC
AAGGTGGAAAAGCAGGAGAAGCGCAAGACCCCCCGGGGCCGGGCAAAGAA
GCGCGTGCTCTACTCCCGTCGCTTTTTGAACGTGGCCACCGGGGTGGGCG
GCAAGCGGTTGGGGCCCAACAGGTGGGTAGGCAGAGAGGGTGAGGGCATT
TGGCAAAGACGGTGTGGCAGACATGAATGTGAGGCGGGGATTGGAAAGGT
GCTCAACAATCTGGGGGTGTGCTTACATCACGCCCTATGCACATAATCAC
ACAGCAACGCCGACAAGATGCAGAAGTAAAATACTATGGAACGTATAGGA
GGGATAGTGCACGTACCACTGACTTCAACATGCGTGTATGCGACGGGAAG
GACAAAAGACGCGGCCTGTTTGCATCCTGGGTGGATGAGGGGTGGGAAGT
GTTTGTGCTCACAGATTTGAAAGAAATCTTGAAGGAAACATAACATCTCT
CCATACGTTTGATTTGATGTTGTCGTCTGTCCCTATCTATGCATTGGTCG
CCCCCTAGCGATTCTCTCCATGGCACAGATCCAGGAAAGTCACGAAAACT
AGCGACTCCTGACCAAACTCGGCACACAACCTCTTC back to topCoding sequence (CDS) from alignment at CM002463.1:606967..608702- >rna4444 ID=rna4444|Name=rna4444|organism=Nannochloropsis gaditana|type=CDS|length=1056bp|location=Sequence derived from alignment at CM002463.1:606967..608702- (Nannochloropsis gaditana)
CGACTACAACATTCAGAAGGAGTCCACCCTACACCTGGTACTACGCTTGC
GTGGAGGTGGCAAAGTGCACGGCTCCTTGGCGCGTGCCGGTAAGGTGAAG
GGCCAGACGCCCAAGGTGGAAAAGCAGGAGAAGCGCAAGACCCCCCGGGG
CCGGGCAAAGAAGCGCGTGCTCTACTCCCGTCGCTTTTTGAACGTGGCCA
CCGGGGTGGGCGGCAAGCGGTTGGGGCCCAACAGGTGGGTAGGCAGAGAG
GGTGAGGGCATTTGGCAAAGACGGTGTGGCAGACATGAATGTGAGGCGGG
GATTGGAAAGGTGCTCAACAATCTGGGGGTGTGCTTACATCACGCCCTAT
GCACATAAATGCAAATTTTCGTTAAGACCCTGACGGGCAAGACCATTACT
TTGGACGTGGAGCCCAGCGACACCATTGAGAATGTGAAGCAAAAGATCCA
GGACAAGGAGGGGATCCCCCCTGATCAGCAGCGCCTCATTTTTGCCGGCA
AGCAGCTCGAGGATGGGAGGACACTCAGCGACTACAACATTCAGAAGGAG
TCCACCCTACACCTGGTACTACGCTTGCGTGGAGGTGGCAAAGTGCACGG
CTCCTTGGCGCGTGCCGGTAAGGTGAAGGGCCAGACGCCCAAGGTGGAAA
AGCAGGAGAAGCGCAAGACCCCCCGGGGCCGGGCAAAGAAGCGCGTGCTC
TACTCCCGTCGCTTTTTGAACGTGGCCACCGGGGTGGGCGGCAAGCGGTT
GGGGCCCAACAGGTGGGTAGGCAGAGAGGGTGAGGGCATTTGGCAAAGAC
GGTGTGGCAGACATGAATGTGAGGCGGGGATTGGAAAGGTGCTCAACAAT
CTGGGGGTGTGCTTACATCACGCCCTATGCACATAAATGCAAATTTTCGT
TAAGACCCTGACGGGCAAGACCATTACTTTGGACGTGGAGCCCAGCGACA
CCATTGAGAATGTGAAGCAAAAGATCCAGGACAAGGAGGGGATCCCCCCT
GATCAGCAGCGCCTCATTTTTGCCGGCAAGCAGCTCGAGGATGGGAGGAC
ACTCAG back to top
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