EWM26229.1, cds4433 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26229.1 vs. NCBI_GenBank
Match: gi|585108228|gb|EWM26229.1| (ubiquitin ribosomal protein s27ae fusion protein [Nannochloropsis gaditana]) HSP 1 Score: 354.755 bits (909), Expect = 7.834e-124 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
Query: 1 MQIFVKTLTGKTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSLARAGKVKGQTPKVEKQEKRKTPRGRAKKRVLYSRRFLNVATGVGGKRLGPNRWVGREGEGIWQRRCGRHECEAGIGKVLNNLGVCLHHALCT 175
MQIFVKTLTGKTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSLARAGKVKGQTPKVEKQEKRKTPRGRAKKRVLYSRRFLNVATGVGGKRLGPNRWVGREGEGIWQRRCGRHECEAGIGKVLNNLGVCLHHALCT
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSLARAGKVKGQTPKVEKQEKRKTPRGRAKKRVLYSRRFLNVATGVGGKRLGPNRWVGREGEGIWQRRCGRHECEAGIGKVLNNLGVCLHHALCT 175
BLAST of EWM26229.1 vs. NCBI_GenBank
Match: gi|1173929453|gb|OQR82681.1| (ubiquitin [Achlya hypogyna]) HSP 1 Score: 233.417 bits (594), Expect = 2.757e-76 Identity = 114/135 (84.44%), Postives = 123/135 (91.11%), Query Frame = 0
Query: 1 MQIFVKTLTGKTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSLARAGKVKGQTPKVEKQEKRKTPR-GRAKKRVLYSRRFLNVATGVGGKRLGPN 134
MQIFVKTLTGKTITLDVEPSD+I+NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSL+RAGKVK QTPKV K E + P+ GRAKKR+ Y+RRF+NV GGK+LGPN
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSLSRAGKVKNQTPKVAKAEDKSKPKTGRAKKRIQYNRRFVNVVANAGGKKLGPN 135
BLAST of EWM26229.1 vs. NCBI_GenBank
Match: gi|1173945127|gb|OQR93793.1| (ubiquitin [Thraustotheca clavata]) HSP 1 Score: 231.876 bits (590), Expect = 9.722e-76 Identity = 115/135 (85.19%), Postives = 123/135 (91.11%), Query Frame = 0
Query: 1 MQIFVKTLTGKTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSLARAGKVKGQTPKVEKQE-KRKTPRGRAKKRVLYSRRFLNVATGVGGKRLGPN 134
MQIFVKTLTGKTITLDVEPSD+I+NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSL+RAGKVK QTPKV K E K+K GRAKKR+ Y+RRF+NV GGK+LGPN
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSLSRAGKVKNQTPKVAKAEDKKKQKTGRAKKRIQYNRRFVNVVANAGGKKLGPN 135
BLAST of EWM26229.1 vs. NCBI_GenBank
Match: gi|698807230|ref|XP_009836644.1| (polyubiquitin [Aphanomyces astaci] >gi|574108200|gb|ETV73708.1| polyubiquitin [Aphanomyces astaci]) HSP 1 Score: 231.876 bits (590), Expect = 1.171e-75 Identity = 115/135 (85.19%), Postives = 124/135 (91.85%), Query Frame = 0
Query: 1 MQIFVKTLTGKTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSLARAGKVKGQTPKVEKQEK-RKTPRGRAKKRVLYSRRFLNVATGVGGKRLGPN 134
MQIFVKTLTGKTITLDVEPSD+I+NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSL+RAGKVK QTPKV K+E +K RGRAKKR+ Y+RRF+NV G G K+LGPN
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSLSRAGKVKNQTPKVAKKEDTKKQKRGRAKKRIQYNRRFVNVVGGAGAKKLGPN 135
BLAST of EWM26229.1 vs. NCBI_GenBank
Match: gi|669149542|ref|XP_008610333.1| (50S ribosomal protein L40e [Saprolegnia diclina VS20] >gi|530737985|gb|EQC36227.1| 50S ribosomal protein L40e [Saprolegnia diclina VS20]) HSP 1 Score: 231.106 bits (588), Expect = 1.836e-75 Identity = 114/135 (84.44%), Postives = 123/135 (91.11%), Query Frame = 0
Query: 1 MQIFVKTLTGKTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSLARAGKVKGQTPKVEKQEKRKTPR-GRAKKRVLYSRRFLNVATGVGGKRLGPN 134
MQIFVKTLTGKTITLDVEPSD+I+NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSL+RAGKVK QTPKV K E +K R GRAKKR+ Y+RRF+NV GGK++GPN
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSLSRAGKVKNQTPKVAKAEDKKKQRAGRAKKRIQYNRRFVNVVANAGGKKVGPN 135
BLAST of EWM26229.1 vs. NCBI_GenBank
Match: gi|855304118|ref|XP_012894980.1| (uncharacterized protein [Blastocystis hominis] >gi|855304197|ref|XP_012895008.1| uncharacterized protein [Blastocystis hominis] >gi|300175621|emb|CBK20932.2| unnamed protein product [Blastocystis hominis] >gi|300175649|emb|CBK20960.2| unnamed protein product [Blastocystis hominis]) HSP 1 Score: 229.18 bits (583), Expect = 1.761e-74 Identity = 114/136 (83.82%), Postives = 121/136 (88.97%), Query Frame = 0
Query: 1 MQIFVKTLTGKTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSLARAGKVKGQTPKVEKQEKRKTPRGRAKKRVLYSRRFLNVATGVGGKRLGPNRW 136
MQIFVKTLTGKTITLDVE SDTIENVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSL RAGKVK QTPKV+KQEK K+ GRAKKR Y+RR++NV G KR+GPN +
Sbjct: 1 MQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSLTRAGKVKNQTPKVDKQEKAKSHVGRAKKREQYNRRYVNVVLAPGAKRVGPNNF 136
BLAST of EWM26229.1 vs. NCBI_GenBank
Match: gi|1032152311|gb|OAO15762.1| (ubiquitin [Blastocystis sp. ATCC 50177/Nand II] >gi|1032153064|gb|OAO16434.1| Ubiquitin [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 228.024 bits (580), Expect = 5.268e-74 Identity = 114/136 (83.82%), Postives = 120/136 (88.24%), Query Frame = 0
Query: 1 MQIFVKTLTGKTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSLARAGKVKGQTPKVEKQEKRKTPRGRAKKRVLYSRRFLNVATGVGGKRLGPNRW 136
MQIFVKTLTGKTITLDVE SDTIENVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSL RAGKVK QTPKVEKQEK K+ GRAKKR +Y+RR++NV G KR PN +
Sbjct: 1 MQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSLTRAGKVKNQTPKVEKQEKGKSHVGRAKKREIYNRRYVNVVLAPGAKRQSPNSF 136
BLAST of EWM26229.1 vs. NCBI_GenBank
Match: gi|1032150468|gb|OAO14234.1| (Ubiquitin [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 235.728 bits (600), Expect = 6.071e-74 Identity = 119/158 (75.32%), Postives = 127/158 (80.38%), Query Frame = 0
Query: 1 MQIFVKTLTGKTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSLARAGKVKGQTPKVEKQEKRKTPRGRAKKRVLYSRRFLNVATGVGGKRLGPNRWVGREGEGIWQRRCGRH-ECEAG 157
MQIFVKTLTGKTITLDVE SDTIENVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSL RAGKVK QTPKVEKQEK K+ GRAKKR +Y+RR++NV G KR PN + R+ R + E EA
Sbjct: 1 MQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSLTRAGKVKNQTPKVEKQEKGKSHVGRAKKREIYNRRYVNVVLAPGAKRQSPNSFAMRQARITSTRNAYKAVESEAS 158
BLAST of EWM26229.1 vs. NCBI_GenBank
Match: gi|673031502|ref|XP_008869712.1| (polyubiquitin [Aphanomyces invadans] >gi|574474863|gb|ETW01864.1| polyubiquitin [Aphanomyces invadans]) HSP 1 Score: 225.713 bits (574), Expect = 2.569e-73 Identity = 113/135 (83.70%), Postives = 123/135 (91.11%), Query Frame = 0
Query: 1 MQIFVKTLTGKTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSLARAGKVKGQTPKVEKQEK-RKTPRGRAKKRVLYSRRFLNVATGVGGKRLGPN 134
MQIFVKTLTGKTITLDVEPSD+I+NVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSL+RAGKVK QTPKV K+E +K RGRAKKR+ Y+RRF+NV G K++GPN
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSLSRAGKVKNQTPKVAKKEDTKKQKRGRAKKRIQYNRRFVNVV--AGAKKMGPN 133
BLAST of EWM26229.1 vs. NCBI_GenBank
Match: gi|635372420|emb|CCI39223.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 222.246 bits (565), Expect = 6.162e-72 Identity = 115/135 (85.19%), Postives = 123/135 (91.11%), Query Frame = 0
Query: 1 MQIFVKTLTGKTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKVHGSLARAGKVKGQTPKVEKQE-KRKTPRGRAKKRVLYSRRFLNVATGVGGKRLGPN 134
MQIFVKTLTGKTITL+VE +DTI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGGKVHGSLARAGKVKGQTPKV KQE K+K GRAKKR Y+RRF+NV T GGKR+GPN
Sbjct: 1 MQIFVKTLTGKTITLEVESADTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLNDYNIQKESTLHLVLRLRGGGKVHGSLARAGKVKGQTPKVNKQEGKKKALTGRAKKRWQYNRRFVNVVT--GGKRVGPN 133 The following BLAST results are available for this feature:
BLAST of EWM26229.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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