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Properties
| Property Name | Value |
|---|
| Product | vesicle transport protein sft2a |
| Orig transcript id | gnl|cribi|Naga_100025g61.7517.mrna |
| Orig protein id | gnl|cribi|Naga_100025g61.7517 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:578795..579964 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4432 ID=rna4432|Name=rna4432|organism=Nannochloropsis gaditana|type=mRNA|length=207bp
ATGGAGCGGTCAATAGGTCGTGTGAACCATATCAGATGGAACCAAGGAAC
CCCCCACCTGCATGACAGCAGCATGGGAGAGTTGCACCTGAAAGGTCAGC
TTCCGTGGCACAGTATTGAAGGCGTACGCGTCTTTCCGCATCTTTCACTT
TCTGCTTCTCATATTTTAAGTCGAGATGACCCTGGCAGTCACCTCACATG
GGCATGA back to topprotein sequence of rna4432 >rna4432-protein ID=rna4432-protein|Name=rna4432|organism=Nannochloropsis gaditana|type=polypeptide|length=264bp
MSSLYSLSLRYTGNTMKAIQNMLPGAQEESVTEEVCAMCPSLTYQQRMIG
FVGCFCLGYLLSFIGTLSLISMTADGIRNFAALYVVGNIIALCSTGFLVG
PKSQCKKMFDKTRRYSTILYIIMLIVVFAVALARQNVFLVLFLLIIQVLV
AVWYTLSYVPFGRQAVVGCMQNTLFKPCPGAIAGMVAKKSCHHLRQRNHL
WKTTTPFIYCNVVCRKPTDSAMITSTSCSSEKHRRSVDGTMPVTPSSMCL
LSRQRESKRWTIHI back to topmRNA from alignment at CM002463.1:578795..579964- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4432 ID=rna4432|Name=rna4432|organism=Nannochloropsis gaditana|type=mRNA|length=1170bp|location=Sequence derived from alignment at CM002463.1:578795..579964- (Nannochloropsis gaditana)
ATGTCAAGTCTGTACTCACTTTCCCTCCGCTACACAGGCAATACCATGAA
GGCCATTCAAAATATGCTGCCTGGTGCTCAGGAGGAGTCTGTCACGGAGG
AGGTCTGTGCCATGTGCCCGTCCTTGACTTATCAACAGCGCATGATTGGT
TTCGTGGGCTGTTTTTGCCTTGGCTATCTACTCTCTTTCATTGTAAGTGG
TGGGATGCTATCATGATCGTGCAGAGGGAATGCAGTCATTTATTCTCACT
TCCCCGTGTGATGTGACTGTGCTGTCACAATTGAAAGCGTCATGCTCTCA
CTGGTCAGTCGTCTTCGCCTGCGTTGTTCCTTGGTTCCTTTATTTCTCTT
CGACTGGCTCTCTCTGATGCTCTTTACTTGTTCATCTCCACCCTTACTTC
AAAATGTGACAACGTATTGCCCGGCGTTGATGGTCGCTAAACCCTCTCCG
TGTGCCTTTCACAACCATCTCACTACATTTTCCCCACTACACATATCGGA
ACCGAAATTTGCACCCTTAGGGGACACTATCGTTAATATCGATGACAGCA
GATGGTATTCGCAATTTTGCCGCTTTGTACGTGGTTGGGAACATCATCGC
CTTGTGCTCAACTGGCTTCCTCGTCGGGCCCAAGAGCCAATGCAAGAAGA
TGTTCGACAAAACTCGGCGCTACTCTACCATCCTTTACATCATCATGCTC
ATCGTCGTTTTCGCCGTGGCACTGGCCCGTCAGAACGTCTTTCTGGTCCT
CTTCCTCCTGATCATCCAGGTATTGGTGGCAGTGTGGTATACCTTGTCCT
ACGTGCCTTTCGGGCGCCAGGCAGTTGTCGGTTGTATGCAAAACACCCTC
TTCAAGCCCTGTCCAGGAGCCATCGCGGGAATGGTGTGAATTGGGTCGTA
AAAAGGGAGAAGATATGAACAGGTAAAGAAAGGGCAAAGAAGAGCTGTCA
TCACCTCCGGCAGCGAAACCATTTATGGAAGACAACCACACCATTTATAT
ATTGTAATGTAGTCTGCAGGAAGCCCACAGATTCGGCAATGATAACTTCG
ACTTCTTGCTCGTCTGAAAAGCACCGCCGTTCTGTCGACGGAACCATGCC
CGTGACGCCGTCTTCCATGTGTCTGCTTTCTCGACAGCGCGAGAGTAAGC
GATGGACGATACATATTTAA back to topCoding sequence (CDS) from alignment at CM002463.1:578795..579964- >rna4432 ID=rna4432|Name=rna4432|organism=Nannochloropsis gaditana|type=CDS|length=2385bp|location=Sequence derived from alignment at CM002463.1:578795..579964- (Nannochloropsis gaditana)
GGCAAAGAAGAGCTGTCATCACCTCCGGCAGCGAAACCATTTATGGAAGA
CAACCACACCATTTATATATTGTAATGTAGTCTGCAGGAAGCCCACAGAT
TCGGCAATGATAACTTCGACTTCTTGCTCGTCTGAAAAGCACCGCCGTTC
TGTCGACGGAACCATGCCCGTGACGCCGTCTTCCATGTGTCTGCTTTCTC
GACAGCGCGAGAGTAAGCGATGGACGATACATATTTAAGGGACACTATCG
TTAATATCGATGACAGCAGATGGTATTCGCAATTTTGCCGCTTTGTACGT
GGTTGGGAACATCATCGCCTTGTGCTCAACTGGCTTCCTCGTCGGGCCCA
AGAGCCAATGCAAGAAGATGTTCGACAAAACTCGGCGCTACTCTACCATC
CTTTACATCATCATGCTCATCGTCGTTTTCGCCGTGGCACTGGCCCGTCA
GAACGTCTTTCTGGTCCTCTTCCTCCTGATCATCCAGGTATTGGTGGCAG
TGTGGTATACCTTGTCCTACGTGCCTTTCGGGCGCCAGGCAGTTGTCGGT
TGTATGCAAAACACCCTCTTCAAGCCCTGTCCAGGAGCCATCGCGGGAAT
GGTATGTCAAGTCTGTACTCACTTTCCCTCCGCTACACAGGCAATACCAT
GAAGGCCATTCAAAATATGCTGCCTGGTGCTCAGGAGGAGTCTGTCACGG
AGGAGGTCTGTGCCATGTGCCCGTCCTTGACTTATCAACAGCGCATGATT
GGTTTCGTGGGCTGTTTTTGCCTTGGCTATCTACTCTCTTTCATTGGCAA
AGAAGAGCTGTCATCACCTCCGGCAGCGAAACCATTTATGGAAGACAACC
ACACCATTTATATATTGTAATGTAGTCTGCAGGAAGCCCACAGATTCGGC
AATGATAACTTCGACTTCTTGCTCGTCTGAAAAGCACCGCCGTTCTGTCG
ACGGAACCATGCCCGTGACGCCGTCTTCCATGTGTCTGCTTTCTCGACAG
CGCGAGAGTAAGCGATGGACGATACATATTTAAGGGACACTATCGTTAAT
ATCGATGACAGCAGATGGTATTCGCAATTTTGCCGCTTTGTACGTGGTTG
GGAACATCATCGCCTTGTGCTCAACTGGCTTCCTCGTCGGGCCCAAGAGC
CAATGCAAGAAGATGTTCGACAAAACTCGGCGCTACTCTACCATCCTTTA
CATCATCATGCTCATCGTCGTTTTCGCCGTGGCACTGGCCCGTCAGAACG
TCTTTCTGGTCCTCTTCCTCCTGATCATCCAGGTATTGGTGGCAGTGTGG
TATACCTTGTCCTACGTGCCTTTCGGGCGCCAGGCAGTTGTCGGTTGTAT
GCAAAACACCCTCTTCAAGCCCTGTCCAGGAGCCATCGCGGGAATGGTAT
GTCAAGTCTGTACTCACTTTCCCTCCGCTACACAGGCAATACCATGAAGG
CCATTCAAAATATGCTGCCTGGTGCTCAGGAGGAGTCTGTCACGGAGGAG
GTCTGTGCCATGTGCCCGTCCTTGACTTATCAACAGCGCATGATTGGTTT
CGTGGGCTGTTTTTGCCTTGGCTATCTACTCTCTTTCATTGGCAAAGAAG
AGCTGTCATCACCTCCGGCAGCGAAACCATTTATGGAAGACAACCACACC
ATTTATATATTGTAATGTAGTCTGCAGGAAGCCCACAGATTCGGCAATGA
TAACTTCGACTTCTTGCTCGTCTGAAAAGCACCGCCGTTCTGTCGACGGA
ACCATGCCCGTGACGCCGTCTTCCATGTGTCTGCTTTCTCGACAGCGCGA
GAGTAAGCGATGGACGATACATATTTAAGGGACACTATCGTTAATATCGA
TGACAGCAGATGGTATTCGCAATTTTGCCGCTTTGTACGTGGTTGGGAAC
ATCATCGCCTTGTGCTCAACTGGCTTCCTCGTCGGGCCCAAGAGCCAATG
CAAGAAGATGTTCGACAAAACTCGGCGCTACTCTACCATCCTTTACATCA
TCATGCTCATCGTCGTTTTCGCCGTGGCACTGGCCCGTCAGAACGTCTTT
CTGGTCCTCTTCCTCCTGATCATCCAGGTATTGGTGGCAGTGTGGTATAC
CTTGTCCTACGTGCCTTTCGGGCGCCAGGCAGTTGTCGGTTGTATGCAAA
ACACCCTCTTCAAGCCCTGTCCAGGAGCCATCGCGGGAATGGTATGTCAA
GTCTGTACTCACTTTCCCTCCGCTACACAGGCAATACCATGAAGGCCATT
CAAAATATGCTGCCTGGTGCTCAGGAGGAGTCTGTCACGGAGGAGGTCTG
TGCCATGTGCCCGTCCTTGACTTATCAACAGCGCATGATTGGTTTCGTGG
GCTGTTTTTGCCTTGGCTATCTACTCTCTTTCATT back to top
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