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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100003g39.1774.mrna |
| Orig protein id | gnl|cribi|Naga_100003g39.1774 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1095387..1099340 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna442 ID=rna442|Name=rna442|organism=Nannochloropsis gaditana|type=mRNA|length=4494bp
ATGCCCGGTGGTGCACGACGTCGCCAGCGACGTAGGGATGGCGGGAGCTT
TTGGGGTGATTTCGCACGGGCAGGATTAGACTATATTTTACCTGTGATAC
GAGACAATCTGTCGCGACCGGCCCCTGCAGCATGCCACCCCGGTAAGTTT
CCTCAAAGTAATCCTTTTCAGCGACAACCAGGGCGAGACTACAACCGTTC
AAATGGTGGGTCTGCCCACAGGAGGCCTCCGGAGGTTGGCGGAGGGACAG
GGGATGAGTCAATGGGGAGGGGAGGCAGTAGGGAGGATGTCGGGGCTCCC
CATGAGTGGGAAGATGGCGAGGAGGCGCAGGAGGAGATGCGTGAGCTGAC
AGCACTCTACGATGGAGACGACGACGACGCCACGGATGGTACGGACGGTG
TGAATGAAGAGTACCGGCCGGCTCGACTTAAGGGCGGCGTTCCTCATCCC
GGCAATGTGGTGCAGTCCGTCGCCATGGCCGCTGCCGTGCCCCCGCCGAT
CACCTACAAACTAGGCTTGCCCCGGAGACTCGTGGAGTCTGGAGCTCTAT
CCTTGTTGCAGGTGGAGGCTGTACTGTATTGCATGCAAATGCACGAAACG
AGGCTTCCCACGGGGGCGCGGGCTGGCTGGATGCTCGGGGATGGCACGGG
CATCGGGAAAGGCCGCATCTTGGCGGCCATCATCTTGGAGAACCTCATCC
GGGGCCGGGACCGGGCAATATGGGTCACAGCATCTCCTTTCTTGGCGACG
CAGATCCGTCGGGATGCGCGGGATGTCGGATTGAAAACGAGAATCTGGGA
GCTCTCCGACCAGAAACTAAAGGACAATCACGACCTGTCCGACCTGGGCC
CCGGCCTCATGATCTGCACCTACCGCACGCTCCTCGGGCGGGAGGCTGGG
GGCTCGGTGACCCGGGTGAACCAGCTCCTGAGTTGGGTGGGGGGGGACGG
GTGGGACGGGGTCTTGGCACTGGACGAGGCGCACAGGGCCAAGAACCTCC
ACGCCCAGGGCGGGGGCAAGCCCAGCAAGACGGCTGTCGTCATCGACGCC
CTCCAAAGCCAACTTGGGGATGCCCGCGTCATCTATGCCTCGGCGACCAT
TGCCACCGAGCCCCGGAACATGCAGTGCCTCTCCAGACTGGGCCTGTGGG
GTCCGGGCACGGCTTTCGATTCCTCCACGCGCTTCGCCAAGGCCATGACC
GACGCCGGTCTCCCCGGCTTGGAGCTCCTTTCCGTGAATCTGAAGCTGGC
AGGCAAGTACTTTGCAAGGACCTTGGGCTTCAAGGGATGCGAGTTCCAGG
TGGTGAAAGTCCCGATGGACCCGAACTTTGCGGCGGTGTACGATGCCTGT
GCGAGGCAGTGGATGGAGCTGCAGCAAGACTTGCGGTTGCTGGTGCCGTG
CGGTCCTGTCTGGCGGAAAAGGAAGAAGAGGTCCGAGAAGCAGAAACGGG
GGGCCATGGGCCTGAACGGGATGGAAGAGGCAGATGGAGAAGAGGGAAGA
AGGACTGCTACCACGGATGAGGAGAAAGCCAAGCAAATGATTTGGATGTT
GTTCTGGGCGACGCAGCAACGCTTTTTTAGGAGTTTGTACGTGGCTGCGA
AGGTGCCTACGGTCATTGCTCTGGCGCAAGAGGCGATTGCCAACGGGTAC
GCACCCGTGATTGGACTCCAAACCACTGGCGAGAGCCAGATTCGCGTGGA
AAGAGAAAGGACGGCGGAGCGGCGGAAGCGGGCAGCAGGCCTGGGCCCGG
TGGGGGACAGCGAGGTCCAGGATTTAGAGGAGCTGTCGCAGTGTCGCGGT
CAAATGGAGCGCTTCTTGACAGTCCATATGAGCGACGCTTTGGGGCCAGG
GACGGCAGAGGTTCGATCCCGCCATCTCTCCTGGCTGGATCGTATAGGCC
CCCGCTTGCCACCCAACCCCTTGGACCAGCTCGTGGAGGGCCTGGGAGGG
GCGAAGGTGGTAGCAGAACTGACAGGGCGACAGTTCCGGAGAAAGCATGG
CCGGTACGAGCAGACCGCTACCTCGCAAAGGTTGCACGAGGCGGAGCGGA
CGGCCTTCCAGCGGGGTGCAAAGCTCGCAGCCGTCATCTCCGAGGCGGCC
TCTGTTGGGATTTCCTTGCACAGTGACCGGAGGGAGCCGACGGCGCACAA
ACGTCGGGTACACTTCTGCCTGGAGCTTGCCTGGGGCGCCGATCGCGTTA
TGCAGCAACTAGGGCGGACGCATCGTACCAACGCGATGACGGGCCCGCTG
TACAAGTTTGTTGTCACCGAGAAAGTGGGCGCCGACATACGGTTTATCAG
CACGGTCGCTCGTCGCCTGCAGTCACTGGGTGCCATATGCCACGGTCATG
AGGGAGCCACGACCAAGACGATGGATCTGCGCGAGTACAACGTGGAGTCA
AAGCATGGGAACGAGGCCTACACAAGACTTTGGTCCGTCGAGGATCCCAG
CCCGCGCTATCGCAAGGCCCTGCGAATCTTGGAGGCTGTGGCCCTGAATA
GGGATGATGATACCAGAAAATTTCTTAATCGTTGTTTAAGCTTTGAACTG
GAAATTCAGCATGTTCTGATGGACAAATTTTTCGAATTGTTCAACAAGGT
AGTACATGCCGCCAAAATGGATGGCACATATGAGTCACAAGGCATAATAA
ACATCCGAGGGGAGACTGTTGAAGTGCATGGGCCCATCAAGAAGTATAAA
ACTTCAGACGATGTCCTGCAGCTGTCTCTTCCACGACCTTCTTTGACTGA
GACAGTCGCAGCTGGAGCGTCTCACGTCGCTCCTTGCATTGTTGATGGAG
GCGACAATCATGCAAGCAAAGCTGTGCTCGCCAACAAGGGTCTCACAAAC
GGAGTTTGCCACCAGGACATGAAGAGGGCAAAAAGTTTGCATGAGGAGAC
GACCATGTCTCTAGTCACCCTCACTCTGGACCGAGGTCTGCGTTTCGACC
GGGCCCTTGAGATGCTGAAGGGGGCAGACGCGGGCGGTGAGGGTCATCTC
GGTGGAAACGGCTTTTATCTTTACCCGGACTCGGTCAGGCCTTTTTTGGC
CCTCGATCGTGGAGGGGGTTGTTCGTTTAAGATCATTTTCCCTGACGTGG
GCCGTCAAGCATTCGTGGACAAGAGGCCTGAATACTTGCTCCGGGCGCAA
TACCTTCGACCCCACGAGGCGGAAATAGCCTGGACACGCTGCTACAATGC
CGCTCTCGTTCGCTGCTTCCCTCATGGTCGACAAGCACCCTCCGATAGCG
TAGGCCTACGGATTCACAAAGCTTTCATGTTGACGTTCGACGTTATCAGA
CACTGGCAGCTAGTTCAAAAATTGGCACGTAGGAAGCGGCTGCGTGTTGT
AAGAGCGGCAATCACATCAAAACCGAAGAAGCATTTCATGGGGGTTATGC
TCTCGGAAAAAGCATTAAGAAGGTTGGAGGGGCAAGGTCTGCCTGTGGTA
GATGAAGAGGGAGAGGCAGCGGCCGTGGAGGAAGGTTTTGAAGACAAGCA
ATTGGATGTAGTAACGTTTTTTGAAGAATGGGAGAGAGGAGTTAAAGAAA
GGGCAATGAGTGGCATGCTTGATGGCAGGAACGGAAAGGAAAGTGTGGAA
GAGCAGTGTAAATATGATGAAATGGAGGTCGTAAGGACTGAATCAAACAC
CATGGATGGAAGGACCGCAGAGGGGCATGACCTAGAGCATGAAGAGCAAA
ATGTCATATATTTGGATAGCGATTTGGATTCGGAAGTTCTCACCGAAAAT
TGTGGCTTGGGGGAGCATCATGGAAGAAGGATGCTTCATGGATCAAAAGA
GAAGTGGAGTCGGGAGGACCCTGTGGACTCTGCAGGTGCGAGTACATTGG
ATATTGCTCATGAGGACGACGACAAAATGGATTTATTGAGCACCGAGAGT
CCTTGTATTTGTGCCCAGGTGTCTTCAATCTCGGAAGCATCAAATGATGA
TGTATACGCGCGTAAAGGCAGTGAGAATGCTTTCAAAGGAATCGTCGATT
TGTCACAAGGCTGCGTACTGGAGGATGGAAAGGAGGACTCCGTGGGCGAA
AGTGAGAAATCGCGCGTGTACTCGAACGTGCATGATCATAAGACCGTGAT
CGATGTCGATGCTTTGGACGACAAAGGACTGGGAAGAAAGAGAGGTGGGT
ATGAACATGACAGCAATACTGCTGCCCGCAACAGTGCAAGCTGTGAGGCT
TGTCGCAATGGCGAAGGTTTTGTGAAGATCCGAAACCCGATTGATTTAAG
TATAGAGACGGGAAGTTCCCGAGCGGGGGACATGGAAGATGAGGACGCTT
TGGTTATGGATGTCTTGGATATGCTGGATGAGCTTAAAGATGAAGACATC
ATCACGAAGCAGGAAGCGCGAGGACTCCGTGCGCGGGCAGTGAACAGGGA
TGCGCTTGTCGTGGAGGCATTTTACAAAGCACGTGAATGCAATACAGCCT
ACACAGGCGGGCAAGTTTTTCGAAAAATTGCGTTGGGAATGTGA back to topprotein sequence of rna442 >rna442-protein ID=rna442-protein|Name=rna442|organism=Nannochloropsis gaditana|type=polypeptide|length=392bp
MRFHRRSLFARQLLDQIMNGFLSMRKVAPVVALAVVTVCYSFATVKHDIL
EQSLLFRNSSSNATAFRTYTAASGIIDAAATIDCCSTFSMLGLEDTVNTT
GDWYHYRSPKNFTASDLTLLRADIAQALAPPKRCAARQSTTNKSATLRLS
FLHVPKTGGESVEINLGLGNHKSHSLGQDRLGYLDRDQLDALSVFTTIRD
PHDRMLSWFKFCLAGYAPPNTFEKRRMPSTKERKTQTCTKAHNLTNGVRT
KEDLKMAFASFVEYVTTNKEGRDLWLIGTYARYLLNDEGRFLPRWVIRFD
QLEEDWERVVQCGLGFTDAILTHENDSGDLKRSLPPRMTAMFNEERDFHY
WYLPKPWCLVQQAFQIDFELFPMMNWAGMSGYHVSSEAECFV back to topmRNA from alignment at CM002455.1:1095387..1099340+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna442 ID=rna442|Name=rna442|organism=Nannochloropsis gaditana|type=mRNA|length=3954bp|location=Sequence derived from alignment at CM002455.1:1095387..1099340+ (Nannochloropsis gaditana)
ACTGATAGGCAATGCAGGATGAGATGCTACGCATCCAAAGCCAATCAGAA
TTCGGCATGACATCTCTCAGATTCTGTTTCAACAAGGAATCAGGAATGAT
GGTCTACCCTTTATGAAAAATGCACTGTAGGTATACTGTATGGGAATAAC
CCACATCTATATCCATATCTATTAGATCTAGTGCCCAGTCGATTCCAACA
AGATGAGATTTCACCGCCGTTCACTCTTTGCTCGTCAGCTATTAGACCAG
ATCATGAACGGGTTCTTGTCGATGCGTAAAGTGGCGCCTGTGGTAGCTCT
CGCGGTTGTGACTGTCTGCTATTCTTTTGCAACCGTCAAGCATGACATCC
TCGAGCAATCCTTGTTGTTtcgcaacagcagcagcaacgccACCGCTTTT
CGCACCTACACTGCCGCAAGTGGCATTATTGATGCAGCAGCAACGATTGA
CTGTTGTTCGACATTCAGCATGCTTGGATTGGAGGACACAGTGAACACGA
CAGGAGACTGGTACCACTACAGGTCCCCAAAAAACTTTACGGCAAGCGAC
TTGACCTTGCTGCGAGCAGACATTGCACAAGCATTGGCGCCTCCCAAACG
CTGCGCTGCTCGCCAGAGTACTACGAACAAAAGTGCGACACTACGATTGT
CCTTTCTTCATGTCCCAAAGACTGGGGGAGAGTCCGTGGAGATAAATTTG
GGGTTAGGGAACCACAAGAGTCATTCCTTGGGCCAGGATAGACTTGGATA
TCTCGACCGAGATCAGTTAGATGCCCTAAGCGTATTCACGACAATTCGCG
ACCCGCACGATCGCATGTTGAGCTGGTTTAAATTCTGTTTAGCCGGGTAT
GCCCCGCCGAATACCTTCGAGAAACGCCGCATGCCATCCACAAAAGAACG
CAAAACGCAAACCTGCACCAAAGCTCACAATTTGACGAACGGTGTTCGTA
CAAAGGAAGATCTCAAAATGGCCTTTGCCTCATTTGTGGAGTATGTCACT
ACaaacaaggagggcagagatCTTTGGTTAATTGGAACCTACGCTCGATA
TCTTCTGAATGACGAGGGGCGTTTCTTGCCACGGTGGGTGATTCGGTTTG
ATCAGCTGGAAGAAGATTGGGAGCGGGTCGTTCAGTGTGGATTGGGTTTC
ACGGATGCAATATTGACTCACGAGAATGATAGTGGCGATCTCAAGAGAAG
TCTCCCCCCGAGAATGACGGCCATGTTCAACGAGGAAAGGGATTTTCATT
ATTGGTACCTACCAAAGCCTTGGTGCTTGGTACAACAAGCTTTTCAAATT
GACTTTGAGCTATTTCCGATGATGAACTGGGCTGGAATGTCTGGCTATCA
CGTGTCATCCGAGGCTGAATGTTTTGTGTGAAGTTCCTATTGATTGTCTT
CTGTCTCTTTTTGATGCGTTGGCAGATACCAAGGTAGCTTTGACTTGCAT
TGTGCCTGAAGCGTATGGCTGTTGCTGGCAAAGAGAGCTAGCTAGTAGCT
GGAGAAGTGTTCTGACACTCTGAATCTAGAGCCCTGCGTACTTGTAGCTA
TCTATGCTTTGCGCCTTGCAAAGTGTCTCAATCCAATCGCTAATGCTGGC
AACGGGTGCTCTAGATGATAACTGCTAGGGCATTCTACTGATCTAATAAG
AGCTACTAGAAACCTGCTGGTTGCTAGGTACTGATGCTTTGCCCTTCAAT
GGTCTTGAGTATAGTGCTCTTACAGTCAAAGACTACTATCCAGTAGCTAG
AGTATTGTTCTACTATTCTATAGCTAATATAGGTACTCTGACTAGATATA
TCTAAACTTTGTGTCTTGCAATGTGTCTCAGTCCTATCACTTTTTGCTGA
CCATGAGTGCTCTATGTATAGGTACTAGAGAGCATTCTACTTATCTAGAG
GGGAGAGCTAGAGGCCTGCATGAAACTACTGATACCTTGCCTTGCAATGT
GTCTCAAGCGTATGACTGTTGCTAGTAAAGAGTGCTAGCTCATAGCTAGA
ATAGTGCTCTACTATTTTTAATCAACTAGAACATGATTGCAATACAGCCA
ACACAAGCGGGCAAGTGATTGCGTTGGGAATGTGATACTTCTGTAGAGCC
GTTGGATTGTTATTTGAATGATAGAGGTAGACTCACGAGACTGAAAATGA
TAGATGTAGACTCGCTGAGTTGTCAAATAAATATGGCTTTTAGTAAAAAC
TTGATTTATGCGGCAAAAAACTGTTTGTGTGCTCCAAGAAGCCGAAGGCA
GGATCAACGATAAGCCACAATAGTGCCTTCATTCAACAAGCTTTCTTTCT
ATCGTGAATTCCCAGAGCCAACGGAGAACACGGCGTCAAGGATCATTTTG
CACGCTTTCATCCTTAATGTGACATTTTACAAAAGGCGAAATCTTTCGCC
CACCATGTACACTACACAGTCATTTTGCAATTGTCTCACGCATCCACGGA
GCGTATTTTCTTGTGCAGTATTGTGGGCGAGGTCAAGGTGCGCCAACATT
TCACCAACAGTCAATCCATTCGGCCGGGCAGTCAACAACTTGATCACTTC
TGCAGTGCTTGGTAGTAATTTCTGCTCTGGGACACGAATACTCGTAGCAG
TAACTTGCACGGATGCGTCTTGCTTTTTTGGCGTCATTTTTGCAGTCTCA
GCCTTTGTTTGAACGTGGCCTCGcgcaggagagggtgagaTGGAAGGCTT
CAGAGCACCTGGTGTGGAGTTGACTGAGATTGGCGTCTGTCGCTGTGTCC
ATGAATCAACCGCACTATAAAGACGTGATGTGTCATTAAGTCTTTTTCCT
TGTGCAGCATTACTATCAGCAGACACGCCGTCTTCGCAAGAACCTCCCCC
AATATCCATAAGTGATCGACAAATGTCCCTGGCGCTATCATTCTGCAGGT
AACTGGGTTGGTAAGGCTTCTTGGTATCGCTTCCGTGGGGTAAGGCGCTG
TCCGTCTTGCTGTCTTGACTACCCTTGCTATTCGTACAGCGTCCCTGCAA
TGCATTGTCCATGGCAAGAGAGGCTGGACGCTTCCGTGTAGTCATCCACT
CGCCATCTCCTGCCGAGCCTACTAAAGATTGAGACGAATCCGGCGCCCGA
GAAGGAGGTCGAGTATGCGCCTGACGCGCATGCGTCGTGTTCTGTTGACA
GGTGAGGAATATGCGACACGTTTCCACATCACCCCAGGacgcttcttttc
cttgccaAAATTCTGGGACGGCTATCTTGATGTCCCTGGTCATGTATATA
TCAAAAGGTctgctgcttcctccgcggccTCCACAGGGAGGAGTATCATT
CGGAAGTGAAACTAATCGTGCTGCAGTTGGAGTCTCGATTGCAGCAGGGG
GACTTTTCATCGCGTCGTGTGTTTTTGTCTTTGTGCTCTGTAATGTGGCC
ATTGCCTGAACCACCGCGTCTAGGAGTCCCGGTGGGAAGGCTATGCGGCT
CCAGTCTAAAGGCAAACCGTGCAAGAAGCATTGAGCCAAGTAATTCCGCA
CAGTTCCCTCTTGAATGGGTTTCCGTCTGTTGTTCGCAATTTCACGTATA
CTCTTGCCTTGTTCCATGTACAAATGGTGTGCCTCCAAATAACTAGGTCG
CAAGACGCCTGTCGCTGCTGTCTTGTCGGCAGGGACGGCCTCTCCTACCC
GAACATCTGCCGCACCAGAAAGGGCCGACGTTAGAAGAAGACAATCGGTC
GTCAAACCCAGttccttgctcttcttttgAATCACGTCCAAGAACGCCTG
TCCGTAGCGTTGTATCTTTGTTTCCGGCCACCCCCCTacttcgcgcaatt
tttccacGGTGGTGGGACGAACCAAGGCCAACTGTCGGAGAAAGGATTCG
TCGGAAATCTGATACGCCTTGGTCCCATCCGGCGCATTTCGGGCTTGCTG
AGCTCGCACTTGCATCAAAGCTTGAAgcacattttcttcctttaccCGTG
CCGC back to topCoding sequence (CDS) from alignment at CM002455.1:1095387..1099340+ >rna442 ID=rna442|Name=rna442|organism=Nannochloropsis gaditana|type=CDS|length=1179bp|location=Sequence derived from alignment at CM002455.1:1095387..1099340+ (Nannochloropsis gaditana)
ATGAGATTTCACCGCCGTTCACTCTTTGCTCGTCAGCTATTAGACCAGAT
CATGAACGGGTTCTTGTCGATGCGTAAAGTGGCGCCTGTGGTAGCTCTCG
CGGTTGTGACTGTCTGCTATTCTTTTGCAACCGTCAAGCATGACATCCTC
GAGCAATCCTTGTTGTTtcgcaacagcagcagcaacgccACCGCTTTTCG
CACCTACACTGCCGCAAGTGGCATTATTGATGCAGCAGCAACGATTGACT
GTTGTTCGACATTCAGCATGCTTGGATTGGAGGACACAGTGAACACGACA
GGAGACTGGTACCACTACAGGTCCCCAAAAAACTTTACGGCAAGCGACTT
GACCTTGCTGCGAGCAGACATTGCACAAGCATTGGCGCCTCCCAAACGCT
GCGCTGCTCGCCAGAGTACTACGAACAAAAGTGCGACACTACGATTGTCC
TTTCTTCATGTCCCAAAGACTGGGGGAGAGTCCGTGGAGATAAATTTGGG
GTTAGGGAACCACAAGAGTCATTCCTTGGGCCAGGATAGACTTGGATATC
TCGACCGAGATCAGTTAGATGCCCTAAGCGTATTCACGACAATTCGCGAC
CCGCACGATCGCATGTTGAGCTGGTTTAAATTCTGTTTAGCCGGGTATGC
CCCGCCGAATACCTTCGAGAAACGCCGCATGCCATCCACAAAAGAACGCA
AAACGCAAACCTGCACCAAAGCTCACAATTTGACGAACGGTGTTCGTACA
AAGGAAGATCTCAAAATGGCCTTTGCCTCATTTGTGGAGTATGTCACTAC
aaacaaggagggcagagatCTTTGGTTAATTGGAACCTACGCTCGATATC
TTCTGAATGACGAGGGGCGTTTCTTGCCACGGTGGGTGATTCGGTTTGAT
CAGCTGGAAGAAGATTGGGAGCGGGTCGTTCAGTGTGGATTGGGTTTCAC
GGATGCAATATTGACTCACGAGAATGATAGTGGCGATCTCAAGAGAAGTC
TCCCCCCGAGAATGACGGCCATGTTCAACGAGGAAAGGGATTTTCATTAT
TGGTACCTACCAAAGCCTTGGTGCTTGGTACAACAAGCTTTTCAAATTGA
CTTTGAGCTATTTCCGATGATGAACTGGGCTGGAATGTCTGGCTATCACG
TGTCATCCGAGGCTGAATGTTTTGTGTGA back to top
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