EWM30257.1, cds442 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30257.1 vs. NCBI_GenBank
Match: gi|585112916|gb|EWM30257.1| (hypothetical protein Naga_100003g39 [Nannochloropsis gaditana]) HSP 1 Score: 824.313 bits (2128), Expect = 0.000e+0 Identity = 392/392 (100.00%), Postives = 392/392 (100.00%), Query Frame = 0
Query: 1 MRFHRRSLFARQLLDQIMNGFLSMRKVAPVVALAVVTVCYSFATVKHDILEQSLLFRNSSSNATAFRTYTAASGIIDAAATIDCCSTFSMLGLEDTVNTTGDWYHYRSPKNFTASDLTLLRADIAQALAPPKRCAARQSTTNKSATLRLSFLHVPKTGGESVEINLGLGNHKSHSLGQDRLGYLDRDQLDALSVFTTIRDPHDRMLSWFKFCLAGYAPPNTFEKRRMPSTKERKTQTCTKAHNLTNGVRTKEDLKMAFASFVEYVTTNKEGRDLWLIGTYARYLLNDEGRFLPRWVIRFDQLEEDWERVVQCGLGFTDAILTHENDSGDLKRSLPPRMTAMFNEERDFHYWYLPKPWCLVQQAFQIDFELFPMMNWAGMSGYHVSSEAECFV 392
MRFHRRSLFARQLLDQIMNGFLSMRKVAPVVALAVVTVCYSFATVKHDILEQSLLFRNSSSNATAFRTYTAASGIIDAAATIDCCSTFSMLGLEDTVNTTGDWYHYRSPKNFTASDLTLLRADIAQALAPPKRCAARQSTTNKSATLRLSFLHVPKTGGESVEINLGLGNHKSHSLGQDRLGYLDRDQLDALSVFTTIRDPHDRMLSWFKFCLAGYAPPNTFEKRRMPSTKERKTQTCTKAHNLTNGVRTKEDLKMAFASFVEYVTTNKEGRDLWLIGTYARYLLNDEGRFLPRWVIRFDQLEEDWERVVQCGLGFTDAILTHENDSGDLKRSLPPRMTAMFNEERDFHYWYLPKPWCLVQQAFQIDFELFPMMNWAGMSGYHVSSEAECFV
Sbjct: 1 MRFHRRSLFARQLLDQIMNGFLSMRKVAPVVALAVVTVCYSFATVKHDILEQSLLFRNSSSNATAFRTYTAASGIIDAAATIDCCSTFSMLGLEDTVNTTGDWYHYRSPKNFTASDLTLLRADIAQALAPPKRCAARQSTTNKSATLRLSFLHVPKTGGESVEINLGLGNHKSHSLGQDRLGYLDRDQLDALSVFTTIRDPHDRMLSWFKFCLAGYAPPNTFEKRRMPSTKERKTQTCTKAHNLTNGVRTKEDLKMAFASFVEYVTTNKEGRDLWLIGTYARYLLNDEGRFLPRWVIRFDQLEEDWERVVQCGLGFTDAILTHENDSGDLKRSLPPRMTAMFNEERDFHYWYLPKPWCLVQQAFQIDFELFPMMNWAGMSGYHVSSEAECFV 392
BLAST of EWM30257.1 vs. NCBI_GenBank
Match: gi|585100192|gb|EWM20514.1| (hypothetical protein Naga_100235g3 [Nannochloropsis gaditana]) HSP 1 Score: 209.92 bits (533), Expect = 1.607e-63 Identity = 111/189 (58.73%), Postives = 124/189 (65.61%), Query Frame = 0
Query: 90 MLGLEDTVNTTGDWYHYRSPKNFTASDLTLLRADIAQALAPPKRCAARQSTTNKSATLRLSFLHVPKTGGESVEINLGLGNHKSHSLGQDRLGYLDRDQLDALSVFTTIRDPHDRMLSWFKFCLAGYAPPNTFEKRRMPSTKERKTQTCTKAHNLTNGVRTKEDLKMAFASFVEYVTTNKEGRDLWLIG 278
MLGLEDT TTGDWYH+R P N+ ASDLTLLRAD A+ALA P++ +KS+ L QDRL DRDQL+AL VFTTIRDPHDR LSWFKFCL +A PNTF K MP T E+KTQ CTKAH LTNG+RTKEDLK+AFASFV Y+T NKEGRDL L G
Sbjct: 1 MLGLEDTAKTTGDWYHFRFPNNYAASDLTLLRADTARALAHPEK-------------------------------------NKSYFLSQDRLENPDRDQLNALGVFTTIRDPHDRTLSWFKFCLVRWATPNTFAKLIMPHTDEQKTQICTKAHTLTNGIRTKEDLKLAFASFVVYLTANKEGRDLRLSG 152
BLAST of EWM30257.1 vs. NCBI_GenBank
Match: gi|551655066|ref|XP_005830308.1| (hypothetical protein GUITHDRAFT_110743 [Guillardia theta CCMP2712] >gi|428174432|gb|EKX43328.1| hypothetical protein GUITHDRAFT_110743 [Guillardia theta CCMP2712]) HSP 1 Score: 92.0485 bits (227), Expect = 7.911e-18 Identity = 66/204 (32.35%), Postives = 97/204 (47.55%), Query Frame = 0
Query: 134 CAARQSTTNKSATLRLSFLHVPKTGGESVEINLGLGNHKSHSLGQDRLGYLDRDQLDALSVFTTIRDPHDRMLSWFKFCLAGYAPPNTFEKRRMPSTKERKTQTCTKAHNLTNGVRTKEDLKM---AFASFVEYVTTNKEGRDLWLIGTYARYLLNDEGRFLPRWVIRFDQLEEDWERVVQCGLGFTDAILTHENDSGDLKRSL 334
C S + L FLH+PKTGGE++E L L HK+H DR R + F+ IR+P DRMLSWF+FCL G+ + ++P K++ C AH L N K ++ AF +++E + E W+ YA +L + +++RF+ L D V+ L +L HEN S D KR +
Sbjct: 13 CGRSTSAIPLAERSELIFLHIPKTGGETIERALDL--HKNHLPAVDRAREYARPHVS----FSVIRNPFDRMLSWFRFCLHGW-------RGQLPDPKKQ----CMLAHRLINAFPGKHNVSTVGRAFEAWLETTLGSPEWLHYWIFFPYAIFLGGPNLKV--DFLLRFEHLSSD-LLVLAAALQRNVTMLPHENSSSDWKRGM 196
BLAST of EWM30257.1 vs. NCBI_GenBank
Match: gi|676379865|ref|XP_009033211.1| (hypothetical protein AURANDRAFT_61459 [Aureococcus anophagefferens] >gi|323456258|gb|EGB12125.1| hypothetical protein AURANDRAFT_61459 [Aureococcus anophagefferens]) HSP 1 Score: 89.3521 bits (220), Expect = 6.185e-16 Identity = 71/232 (30.60%), Postives = 98/232 (42.24%), Query Frame = 0
Query: 149 LSFLHVPKTGGESVEINLGLGNHKSHSLGQDRLGYLDRDQLDALSVFTTIRDPHDRMLSWFKFCLAGYAPPNTFEKRRMPS---TKERKTQTCTKAHNLTNGVRTKEDLKMAFASFVEYVTTNKEGRDLWLIGTYARYLLNDE-GRFLPRWVIRFDQLEED---WERVVQCGLGFTDAILTHENDS--GDLKRSLPPRMTAMFNEERDFHYWYLPKPWCLVQQAFQIDFELF 371
L F+HVPKTGG SVE K+H+L DR L SV IRDP+DR LSWF+FC+AG+ + K P+ K R+ K + MAF ++ V + +LW+ A YL + G FL ++RF++L D W C EN S GD LP + Y P+ +V A+ +D +LF
Sbjct: 177 LRFVHVPKTGGTSVEKAFKPRFPKNHALA------YDRSDLAGASVVAVIRDPYDRALSWFRFCIAGF-----YGKLPHPTAHCAKARRFHADAKKRKIRPPASPTARAAMAFERWLALVHGDAAYANLWVTTPLAVYLTHPATGEFLVDALVRFERLAADVAAWCAPRGCAAAAAKLASVQENPSRIGDDPLDLP------------YGALYTPRARAIVDAAWGVDADLF 385 The following BLAST results are available for this feature:
BLAST of EWM30257.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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