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Properties
| Property Name | Value |
|---|
| Product | mucolipin-like protein |
| Orig transcript id | gnl|cribi|Naga_100073g1.10383.mrna |
| Orig protein id | gnl|cribi|Naga_100073g1.10383 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:522666..525020 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4408 ID=rna4408|Name=rna4408|organism=Nannochloropsis gaditana|type=mRNA|length=3154bp
AGGACCCTCGGCGTCTGTTCCAGCGGACGATCATTGGCCCTGCAGCTCCT
CCATTGCACATGTACGAAGCGCGCGGCAAGGCCGGCCCGGGTTGGGGAGG
CACGGAGAGGAAAGAGGTCTCCCATGCTTTGGTCATTGGGTTGCATCGAA
AGCGAATGACCGTGTACATTATCCTCGAGCTGATCCTGACAGTAGGACTC
TTTCAGTTTATGGCTAGCTGGCTACGAGGGCGTATTTTGGATTGGGCCGG
GTCTGTAATAGTTCAGGGATTGGAATGCTGTCACATGTTTTTGCGGTTGC
GGCTACAATCCTGGTGTGTGTGCTGCCTCCGCCTGGGAGCTTCTGTACTG
GCAGGGAGCTGGGTCATGCCGCAAGGCCCTGGAGATTGGACTGCGCTGTT
CATGGTGATCGCTGGTCAGGTCTTGAGCCTAAGTTCGCGATACCACTGCA
TGTTTGGCGGCGCTGAGCGTCCTATGGCCAAGACGTATCTAATCGGAAGC
CATGTGGTGAGTGGCCTTTTGATCAGTGGTGCTTTTCTGAGTCGAGCAGG
TGGGCCTGGTGGGGAGGGAATGTTGAGTGCCTGCGAGCTTCGCCACCACG
GGATCGCTGTGGCGTTGGCCGGAGTGTTGTCTTGCTTGATTGATGCCCTG
GCATATTATAACCGCGGATACCAGTCCACCCGGGGCATTGGGCCTTTCAG
ACGCCCTCCTTCCGGTGGGCGAAGAAGGCGTCTGGTCCTGGCTCGGGGTT
ATGATCAGGATCTCTTCGATTTGCACCACTTCCTGTCGGGGCCGGGGGAG
GCCTCTCAATGGGAAGGGGGGCTCTCAAGCCCGCATTCCAGCATGCTTAT
TCCCGATTTGCCACCTAGCCAGTCGCTCCCTTCTTTCCTGGGCCCGGAGG
CGTCGCAGTGGGCCAGGCGGTGCGGTCACCTCTGGATGCGCTTGTCGGCT
CTGTGGGAGGAAATGGGAGGCCGAGAGCTTGCCGGCCGCCTCCTTCTCAC
AAGTGTCGGGGTGGCTGCATCGGCGGGGCCTGCCGAGACGTTGCTCGCGA
AGGCGAGCGCGCTGATTTTTGGGGAGGACCATCAGTACCACGGCCTTCCC
CCGGTGGGATCCTCTTGGCAGGCTCTGCCCAAGGTCGCGTTCACCACAGT
GGCCGTTGCGGTCTACGGGTTCTTCACGCTTGGCCGTAGCACCTTGTTGC
TCTGCCACCTGCTCCGCCAGCCGGTGGATTTTTCGGCGCTGGGTAAAGGG
GAGAGAGGAGGCGCGGAAAGCCTCCTGCATGGGTGGCTGGAGAAAGGCTG
GGCAGTGATTTTGCGGGAGCCGAGGCTCGAGCATCCAAACAGGGGGGGGG
GGCGGCGCCAGAGTGCGGAAAGCGCCTTCGAAGCCCCGGAGAAGGACATG
TGGCGCGGAGAAATGGAGGAGACCCAGCGCATGTTGTACAGGACGGCAGT
ATTGGCGAGTTGGAGCGTCTTCCCGCCGCGCCTCGAGATGTTTGACGTCT
CGCGGCAGCCCCTAGGCCCAACGGATAGACTCTACCGCGCACAGGCATTC
TTGGACTTGGCTATCCTGGCCCACGGCCAGGTCGAACGGCGACGCCAGGC
GTGCTTCAAGGATCGCGGGGTGTGGCGGGCCACGTGCCGGCCTCTGGTCA
TGGTGGTGAACGCCCTGACCCTACAGATCGAGCTGGAAATGGAGGGGTGC
GGGCGGGTGGAGGGGGGAATGCCGTCCCCCTTGAAGAAGCTGCATGCGCG
CCTGGGGCTGGTAGAGCCAGAGGAAGGGAACAGCCTCGCTGGCCTGATTG
TCGACGCAGAGGTGCAGCGACGGATGGAGGAAGTATGGTCCCGTCGGCGC
AGCCATGGACAGCCGATTGCACAAGAGGATCTGGACTCCGACCCTCACAA
ATGGCTGTTGCCGGCCAAGGGGGAGTGGAGGGGGGGCACGCACCTGTCAC
CTGACCAGGAGGGGAAGATGGCGCCGGGAAGGCCGCCAAAGCCCCTAGAA
ATCCCCACCTTGGACTTGCAGGTGGTGGAGTTGGCAGCATCTGCCTTAGG
CGCTTTGTACCGGAACGCGGTGAGTGTGGTCGAAGAAGAAGAGAGGTTTG
AAGACCCACGGGGCTGCTCCCGGCACAGTATCCCTGCAGTAGTGGGAAGT
TTGGTCGGCTGCCAGCTTGCGCTGCATCTGTACAGCGCCATGGTGTTGTG
TGCAGCGGATGGTGGGGGTGGGAATGGAAGGGGGACGGGGGGATGGGCCG
GATGGGTGAGTGGCAAGGACACAGGGATGACGGAAGCAGGCATGCAAGGC
GCCGTGCCGCGGTTTCAGGTGATTTTCGACCGGCCAAGCGTGGTACTGCC
TCAGCTTGCGGGGGTATCGATGGCCGTTGACGAGGCGATCGAATCTATCC
TCGGCACCTATTATGAATCAGATTTGATGACATTCAGCTTTGCGCCCCTG
TATGCTCGCTGCCTGAAGATGTACATTGAGTGCTGGAGGAGGAAAGATGA
AGAGCGCATGGACAAGGAAATAAGGGACCGTCAAAGCTCAGAGAGGGAGG
GCGGGGAGGACGGGCAGGCGTGGTTGGAGACGAAGCTTTCGAAGGGTAGT
AGGTGGGAGGGTAACGGGAGCCCGTCCTTGCTTCTACAGCGGAGGGGAAA
ATGGAGAAAGTCATAAGCTTGGGAGAAATACAAGAAATGAGCAAAATAAT
GCCGTTCCCCGGAAGGTGGCCAGTTGAATGGAGGTCTCTTGCAACTTTGC
GGGATTCGCAGTTCAGATTCAAGATGCCGAAAGCCTTTTCATTGCTTTTT
ACACCCACGAAATACTTGTCATGCTATGTACAGAGGCCGTGTCGCCACCC
GGGACTACTGTTCCTCGTCCTTCTCGTCCTCCGCCTCCCTGTGACTCGAG
AGGAGGCTGGATGCAGACGATGAGCGTCGCATGCCTTGAGAGGGCCGCCG
ACGGATCTTGGACCTAGCCTCCCCGATCGCCTGCTTGATCTCCGCGGATA
CGCCCCCCCCCCGCTCGTCTCCCTTGCTTGTCTTGGTCTCTTTGTCGCGG
GCCACGTGCCGAAGCAATCGCGTCTCCAGCTCACCCAAGGCCTCGGACAG
GTACAATTGCAGGTCTTCCTCCCTGTGCCACCCTGCTTCTCCCCCTTCAC
CACC back to topprotein sequence of rna4408 >rna4408-protein ID=rna4408-protein|Name=rna4408|organism=Nannochloropsis gaditana|type=polypeptide|length=754bp
MRGLGPRLLVRSERGRSVSSGYVILAPVPVLALPLQGRLRLALPRDRPVG
HLLPTPALPLSLGTLSNPEALAGAHGCVFPEAPRGFKPGPRGSRDRARAS
QPRHATRERGGQGSRDLDTNTGSHCFRCSGAWACGPRRGRVGGRHSFACR
AGSTRALECRCQGGIPHHGSRRSRPQPCPTPPTPRCLPPPPSTPTPPLSN
AYHTLTCLDKLEIFGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRL
LLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLG
YALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIG
EIYVSLYVMLFSYVVLMTCIAIVEEAFFSAAAYAHQLWTQEAEGDKATQD
PLYQPLPPPYHHIEDARRRGERGYGPEEVEDQKELQWATSSHPRALRSDE
AFRPVLLPQDVHHDEYAGSSSAPPLESALSSSSSSSLHYPASTPSSSNPP
APTPSIGSVQQHYAGSAGNVPLGTLPVASPLLPLRNSPAPRPPPLSTSRL
SQVAGTSPSSGSSSPSFPSSLHPSVAPPVSGIKRNASGSRVMSAKLRQLI
HEADAVLAHGGQAHGAVGGGGGGGYASHSSDSRGGPRSDAMSMSPVHRGG
KGEGGGGEGGEAGWHREEDLQLYLSEALGELETRLLRHVARDKETKTSKG
DERGGGVSAEIKQAIGEARSKIRRRPSQGMRRSSSASSLLSSHREAEDEK
DEEQ back to topmRNA from alignment at CM002463.1:522666..525020- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna4408 ID=rna4408|Name=rna4408|organism=Nannochloropsis gaditana|type=mRNA|length=2355bp|location=Sequence derived from alignment at CM002463.1:522666..525020- (Nannochloropsis gaditana)
ATGCGTGGCTTGGGACCTCGTCTTCTTGTACGATCTGAGCGTGGGAGGTC
AGTTTCAAGTGGGTATGTCATATTGGCCCCGGTCCCTGTGCTCGCGCTCC
CTCTTCAAGGGCGGCTACGGCTGGCTCTGCCTCGTGATCGGCCTGTGGGC
CATTTGCTACCAACTCCTGCTCTTCCGCTCAGCCTGGGAACGCTTTCAAA
TCCTGAGGCTCTTGCAGGCGCGCATGGGTGCGTCTTCCCAGAGGCGCCTC
GGGGATTCAAGCCTGGACCTCGGGGCAGTCGGGACAGGGCCCGGGCCTCC
CAGCCAAGACATGCGACAAGGGAAAGGGGAGGACAAGGATCTAGAGACCT
GGACACGAACACAGGCAGCCATTGCTTCCGATGCAGCGGGGCGTGGGCGT
GCGGGCCAAGGCGGGGACGGGTGGGAGGAAGGCACTCCTTTGCTTGCCGC
GCGGGGTCCACACGGGCGCTTGAGTGCAGGTGCCAGGGAGGGATACCGCA
CCATGGAAGCAGAAGAAGCCGCCCGCAACCCTGCCCAACCCCTCCAACCC
CCCGTTGCCTCCCCCCCCCCCCCTCCACCCCCACGCCGCCACTTTCGAAT
GCCTACCACACCCTGACCTGCCTGGATAAACTCGAGATCTTCGGTCTTTG
GCCCGCTGTGGCTGTGTTGGGCAACACCTTCGCCTTGGCCTGCACCCTCC
AATCTCTGACCACCCACGTGGATATCTTTGTCGACCCCTCCCTCCGCCTC
CTGCTCGGGCTCGCGTGTCTGATGCTCTGGCTCGCCCTCGTCCAGTACCT
GGAGTTCGAGGCGCGTCACTACGTCATGATCCTCACCCTCAAGCGGGCTG
TGCCGCGCATTGGCCAATTCCTCTTTGGGATTGCGCCCATGTTCTTGGGA
TACGCCCTCCTGGGCATGATCCTTTTTGGAGACCATAACCCTTACTTTGG
CTCTCTCTCAGCGACGGCGGGTACGCTCTTCTGCGTCGTCAACGGGGATT
CCATCAAGGCCGTCCTCGACAGCTTGCGGGACACGCCTTGGGGCATTGGG
GAGATCTACGTGAGTTTGTATGTGATGCTCTTTTCCTACGTGGTGCTCAT
GACCTGTATCGCCATCGTAGAGGAAGCCTTCTTCAGCGCCGCCGCGTACG
CCCATCAACTATGGACTCAGGAGGCGGAGGGTGATAAAGCAACTCAGGAC
CCTTTGTATCAGCCCTTGCCGCCGCCCTATCATCACATTGAGGACGCGCG
GCGTCGAGGGGAACGTGGTTATGGCCCAGAGGAAGTGGAAGATCAGAAGG
AGCTGCAGTGGGCAACGTCCAGTCATCCGCGGGCTCTCCGTTCTGACGAG
GCATTTAGGCCTGTGTTGCTCCCACAGGATGTTCATCACGACGAATACGC
TGGCTCTTCCTCAGCACCGCCTCTCGAAAGCGCACTCTCGTCTTCTTCTT
CCTCCTCTCTCCATTATCCTGCCTCTACCCCTTCCTCCTCCAACCCTCCC
GCGCCTACGCCGTCCATCGGGAGTGTGCAGCAACACTACGCTGGCAGCGC
TGGAAATGTTCCCCTTGGAACATTACCCGTGGCATCTCCCCTCCTTCCTC
TTCGAAATTCACCAGCCCCCCGTCCTCCACCTCTCTCCACCTCCCGCCTG
TCACAAGTCGCAGGCACTTCGCCCTCGAGCGGCTCCTCCTCTCCTTCCTT
TCCCTCTTCCTTGCATCCATCCGTCGCCCCACCAGTTTCTGGAATTAAGC
GAAACGCCAGTGGTTCGCGTGTCATGTCGGCAAAATTGCGTCAACTGATC
CATGAAGCAGACGCGGTCCTCGCCCACGGCGGGCAGGCGCACGGAGCTGT
TGGTGGCGGAGGAGGGGGGGGCTATGCGTCTCACTCGTCAGACTCAAGAG
GAGGACCAAGGAGTGATGCAATGTCTATGAGTCCAGTCCATCGGGGAGGG
AAAGGAGAAGGAGGAGGTGGTGAAGGGGGAGAAGCAGGGTGGCACAGGGA
GGAAGACCTGCAATTGTACCTGTCCGAGGCCTTGGGTGAGCTGGAGACGC
GATTGCTTCGGCACGTGGCCCGCGACAAAGAGACCAAGACAAGCAAGGGA
GACGAGCGGGGGGGGGGCGTATCCGCGGAGATCAAGCAGGCGATCGGGGA
GGCTAGGTCCAAGATCCGTCGGCGGCCCTCTCAAGGCATGCGACGCTCAT
CGTCTGCATCCAGCCTCCTCTCGAGTCACAGGGAGGCGGAGGACGAGAAG
GACGAGGAACAGTAGTCCCGGGTGGCGACACGGCCTCTGTACATAGCATG
ACAAGTATTTCGTGGGTGTAAAAAGCAATGAAAAGGCTTTCGGCATCTTG
AATCT back to topCoding sequence (CDS) from alignment at CM002463.1:522666..525020- >rna4408 ID=rna4408|Name=rna4408|organism=Nannochloropsis gaditana|type=CDS|length=2265bp|location=Sequence derived from alignment at CM002463.1:522666..525020- (Nannochloropsis gaditana)
ATGCGTGGCTTGGGACCTCGTCTTCTTGTACGATCTGAGCGTGGGAGGTC
AGTTTCAAGTGGGTATGTCATATTGGCCCCGGTCCCTGTGCTCGCGCTCC
CTCTTCAAGGGCGGCTACGGCTGGCTCTGCCTCGTGATCGGCCTGTGGGC
CATTTGCTACCAACTCCTGCTCTTCCGCTCAGCCTGGGAACGCTTTCAAA
TCCTGAGGCTCTTGCAGGCGCGCATGGGTGCGTCTTCCCAGAGGCGCCTC
GGGGATTCAAGCCTGGACCTCGGGGCAGTCGGGACAGGGCCCGGGCCTCC
CAGCCAAGACATGCGACAAGGGAAAGGGGAGGACAAGGATCTAGAGACCT
GGACACGAACACAGGCAGCCATTGCTTCCGATGCAGCGGGGCGTGGGCGT
GCGGGCCAAGGCGGGGACGGGTGGGAGGAAGGCACTCCTTTGCTTGCCGC
GCGGGGTCCACACGGGCGCTTGAGTGCAGGTGCCAGGGAGGGATACCGCA
CCATGGAAGCAGAAGAAGCCGCCCGCAACCCTGCCCAACCCCTCCAACCC
CCCGTTGCCTCCCCCCCCCCCCCTCCACCCCCACGCCGCCACTTTCGAAT
GCCTACCACACCCTGACCTGCCTGGATAAACTCGAGATCTTCGGTCTTTG
GCCCGCTGTGGCTGTGTTGGGCAACACCTTCGCCTTGGCCTGCACCCTCC
AATCTCTGACCACCCACGTGGATATCTTTGTCGACCCCTCCCTCCGCCTC
CTGCTCGGGCTCGCGTGTCTGATGCTCTGGCTCGCCCTCGTCCAGTACCT
GGAGTTCGAGGCGCGTCACTACGTCATGATCCTCACCCTCAAGCGGGCTG
TGCCGCGCATTGGCCAATTCCTCTTTGGGATTGCGCCCATGTTCTTGGGA
TACGCCCTCCTGGGCATGATCCTTTTTGGAGACCATAACCCTTACTTTGG
CTCTCTCTCAGCGACGGCGGGTACGCTCTTCTGCGTCGTCAACGGGGATT
CCATCAAGGCCGTCCTCGACAGCTTGCGGGACACGCCTTGGGGCATTGGG
GAGATCTACGTGAGTTTGTATGTGATGCTCTTTTCCTACGTGGTGCTCAT
GACCTGTATCGCCATCGTAGAGGAAGCCTTCTTCAGCGCCGCCGCGTACG
CCCATCAACTATGGACTCAGGAGGCGGAGGGTGATAAAGCAACTCAGGAC
CCTTTGTATCAGCCCTTGCCGCCGCCCTATCATCACATTGAGGACGCGCG
GCGTCGAGGGGAACGTGGTTATGGCCCAGAGGAAGTGGAAGATCAGAAGG
AGCTGCAGTGGGCAACGTCCAGTCATCCGCGGGCTCTCCGTTCTGACGAG
GCATTTAGGCCTGTGTTGCTCCCACAGGATGTTCATCACGACGAATACGC
TGGCTCTTCCTCAGCACCGCCTCTCGAAAGCGCACTCTCGTCTTCTTCTT
CCTCCTCTCTCCATTATCCTGCCTCTACCCCTTCCTCCTCCAACCCTCCC
GCGCCTACGCCGTCCATCGGGAGTGTGCAGCAACACTACGCTGGCAGCGC
TGGAAATGTTCCCCTTGGAACATTACCCGTGGCATCTCCCCTCCTTCCTC
TTCGAAATTCACCAGCCCCCCGTCCTCCACCTCTCTCCACCTCCCGCCTG
TCACAAGTCGCAGGCACTTCGCCCTCGAGCGGCTCCTCCTCTCCTTCCTT
TCCCTCTTCCTTGCATCCATCCGTCGCCCCACCAGTTTCTGGAATTAAGC
GAAACGCCAGTGGTTCGCGTGTCATGTCGGCAAAATTGCGTCAACTGATC
CATGAAGCAGACGCGGTCCTCGCCCACGGCGGGCAGGCGCACGGAGCTGT
TGGTGGCGGAGGAGGGGGGGGCTATGCGTCTCACTCGTCAGACTCAAGAG
GAGGACCAAGGAGTGATGCAATGTCTATGAGTCCAGTCCATCGGGGAGGG
AAAGGAGAAGGAGGAGGTGGTGAAGGGGGAGAAGCAGGGTGGCACAGGGA
GGAAGACCTGCAATTGTACCTGTCCGAGGCCTTGGGTGAGCTGGAGACGC
GATTGCTTCGGCACGTGGCCCGCGACAAAGAGACCAAGACAAGCAAGGGA
GACGAGCGGGGGGGGGGCGTATCCGCGGAGATCAAGCAGGCGATCGGGGA
GGCTAGGTCCAAGATCCGTCGGCGGCCCTCTCAAGGCATGCGACGCTCAT
CGTCTGCATCCAGCCTCCTCTCGAGTCACAGGGAGGCGGAGGACGAGAAG
GACGAGGAACAGTAG back to top
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