EWM26275.1, cds4398 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26275.1 vs. NCBI_GenBank
Match: gi|585108276|gb|EWM26275.1| (mucolipin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 1510.74 bits (3910), Expect = 0.000e+0 Identity = 754/754 (100.00%), Postives = 754/754 (100.00%), Query Frame = 0
Query: 1 MRGLGPRLLVRSERGRSVSSGYVILAPVPVLALPLQGRLRLALPRDRPVGHLLPTPALPLSLGTLSNPEALAGAHGCVFPEAPRGFKPGPRGSRDRARASQPRHATRERGGQGSRDLDTNTGSHCFRCSGAWACGPRRGRVGGRHSFACRAGSTRALECRCQGGIPHHGSRRSRPQPCPTPPTPRCLPPPPSTPTPPLSNAYHTLTCLDKLEIFGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAAAYAHQLWTQEAEGDKATQDPLYQPLPPPYHHIEDARRRGERGYGPEEVEDQKELQWATSSHPRALRSDEAFRPVLLPQDVHHDEYAGSSSAPPLESALSSSSSSSLHYPASTPSSSNPPAPTPSIGSVQQHYAGSAGNVPLGTLPVASPLLPLRNSPAPRPPPLSTSRLSQVAGTSPSSGSSSPSFPSSLHPSVAPPVSGIKRNASGSRVMSAKLRQLIHEADAVLAHGGQAHGAVGGGGGGGYASHSSDSRGGPRSDAMSMSPVHRGGKGEGGGGEGGEAGWHREEDLQLYLSEALGELETRLLRHVARDKETKTSKGDERGGGVSAEIKQAIGEARSKIRRRPSQGMRRSSSASSLLSSHREAEDEKDEEQ 754
MRGLGPRLLVRSERGRSVSSGYVILAPVPVLALPLQGRLRLALPRDRPVGHLLPTPALPLSLGTLSNPEALAGAHGCVFPEAPRGFKPGPRGSRDRARASQPRHATRERGGQGSRDLDTNTGSHCFRCSGAWACGPRRGRVGGRHSFACRAGSTRALECRCQGGIPHHGSRRSRPQPCPTPPTPRCLPPPPSTPTPPLSNAYHTLTCLDKLEIFGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAAAYAHQLWTQEAEGDKATQDPLYQPLPPPYHHIEDARRRGERGYGPEEVEDQKELQWATSSHPRALRSDEAFRPVLLPQDVHHDEYAGSSSAPPLESALSSSSSSSLHYPASTPSSSNPPAPTPSIGSVQQHYAGSAGNVPLGTLPVASPLLPLRNSPAPRPPPLSTSRLSQVAGTSPSSGSSSPSFPSSLHPSVAPPVSGIKRNASGSRVMSAKLRQLIHEADAVLAHGGQAHGAVGGGGGGGYASHSSDSRGGPRSDAMSMSPVHRGGKGEGGGGEGGEAGWHREEDLQLYLSEALGELETRLLRHVARDKETKTSKGDERGGGVSAEIKQAIGEARSKIRRRPSQGMRRSSSASSLLSSHREAEDEKDEEQ
Sbjct: 1 MRGLGPRLLVRSERGRSVSSGYVILAPVPVLALPLQGRLRLALPRDRPVGHLLPTPALPLSLGTLSNPEALAGAHGCVFPEAPRGFKPGPRGSRDRARASQPRHATRERGGQGSRDLDTNTGSHCFRCSGAWACGPRRGRVGGRHSFACRAGSTRALECRCQGGIPHHGSRRSRPQPCPTPPTPRCLPPPPSTPTPPLSNAYHTLTCLDKLEIFGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAAAYAHQLWTQEAEGDKATQDPLYQPLPPPYHHIEDARRRGERGYGPEEVEDQKELQWATSSHPRALRSDEAFRPVLLPQDVHHDEYAGSSSAPPLESALSSSSSSSLHYPASTPSSSNPPAPTPSIGSVQQHYAGSAGNVPLGTLPVASPLLPLRNSPAPRPPPLSTSRLSQVAGTSPSSGSSSPSFPSSLHPSVAPPVSGIKRNASGSRVMSAKLRQLIHEADAVLAHGGQAHGAVGGGGGGGYASHSSDSRGGPRSDAMSMSPVHRGGKGEGGGGEGGEAGWHREEDLQLYLSEALGELETRLLRHVARDKETKTSKGDERGGGVSAEIKQAIGEARSKIRRRPSQGMRRSSSASSLLSSHREAEDEKDEEQ 754
BLAST of EWM26275.1 vs. NCBI_GenBank
Match: gi|695452558|ref|XP_009535996.1| (hypothetical protein PHYSODRAFT_526427 [Phytophthora sojae] >gi|348668000|gb|EGZ07824.1| hypothetical protein PHYSODRAFT_526427 [Phytophthora sojae]) HSP 1 Score: 144.821 bits (364), Expect = 2.386e-33 Identity = 74/168 (44.05%), Postives = 103/168 (61.31%), Query Frame = 0
Query: 214 FGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAA 381
F W +AV N + C L + + +D +L C + W +LV+YL+ R +++ LTL+R +PR+ QFL G+ P+F+G+ L G ++FG P F S SATA TLF V NGD I + + TPW IG+IYV Y++LFSYVVLM CI I+E+AFFSA
Sbjct: 285 FWFWFVLAV--NFMTVMCLLATWRHAYRLSLDDTLCFTFASCCALQWGSLVRYLQVNTRFHILGLTLRRGLPRVMQFLVGVLPIFVGFVLFGTVMFGAKVPRFQSASATATTLFSVANGDEIHDTFNDVAYTPW-IGQIYVYSYMILFSYVVLMVCIGIIEDAFFSAV 449
BLAST of EWM26275.1 vs. NCBI_GenBank
Match: gi|301089633|ref|XP_002895097.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262102220|gb|EEY60272.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 144.05 bits (362), Expect = 4.285e-33 Identity = 71/168 (42.26%), Postives = 105/168 (62.50%), Query Frame = 0
Query: 214 FGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAA 381
F W +AV N + C L + + ++ +L L L C + W +LV+Y++ R +++ LTL+R +PR+ QFL G+ P+F+G+ L G ++FG P F + S+TA TLF V NGD I + + TPW +G+IYV Y++LFSYVVLM CI I+E+AFFSA
Sbjct: 280 FWFWFVLAV--NFATVTCLLATWRHAYRLSLNDTLCLTFALCCALQWCSLVRYMQVNTRFHILGLTLRRGLPRVMQFLVGVLPIFVGFVLFGTVMFGAKVPRFQTASSTATTLFSVANGDEIHDTFNDVAYTPW-VGQIYVYSYMILFSYVVLMVCIGIIEDAFFSAV 444
BLAST of EWM26275.1 vs. NCBI_GenBank
Match: gi|566021248|gb|ETI44159.1| (hypothetical protein F443_11119 [Phytophthora parasitica P1569] >gi|567958608|gb|ETK84195.1| hypothetical protein L915_10836 [Phytophthora parasitica] >gi|567987325|gb|ETL37632.1| hypothetical protein L916_10729 [Phytophthora parasitica] >gi|568016601|gb|ETL90778.1| hypothetical protein L917_10633 [Phytophthora parasitica] >gi|568046971|gb|ETM44073.1| hypothetical protein L914_10679 [Phytophthora parasitica] >gi|570324887|gb|ETO72835.1| hypothetical protein F444_11190 [Phytophthora parasitica P1976] >gi|570948753|gb|ETP14010.1| hypothetical protein F441_11028 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 144.436 bits (363), Expect = 7.489e-33 Identity = 72/168 (42.86%), Postives = 103/168 (61.31%), Query Frame = 0
Query: 214 FGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAA 381
F W +AV N + C L + + ++ +L C + W +LV+YL+ R +++ LTL+R +PR+ QFL G+ P+F+G+ L G ++FG P F S S+TA TLF V NGD I + + TPW IG+IYV Y++LFSYVVLM CI I+E+AFFSA
Sbjct: 347 FWFWLVLAV--NVATVVCLLATWRHAYRLSLNDALCFTFASCCALQWGSLVRYLQMNTRFHILGLTLRRGLPRVMQFLVGVLPIFVGFVLFGTVMFGAKVPRFQSASSTATTLFSVANGDEIHDTFNDVAYTPW-IGQIYVYSYMILFSYVVLMVCIGIIEDAFFSAV 511
BLAST of EWM26275.1 vs. NCBI_GenBank
Match: gi|570981692|gb|ETP42059.1| (hypothetical protein F442_11021 [Phytophthora parasitica P10297]) HSP 1 Score: 144.436 bits (363), Expect = 7.773e-33 Identity = 72/168 (42.86%), Postives = 103/168 (61.31%), Query Frame = 0
Query: 214 FGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAA 381
F W +AV N + C L + + ++ +L C + W +LV+YL+ R +++ LTL+R +PR+ QFL G+ P+F+G+ L G ++FG P F S S+TA TLF V NGD I + + TPW IG+IYV Y++LFSYVVLM CI I+E+AFFSA
Sbjct: 347 FWFWLVLAV--NVATVVCLLATWRHAYRLSLNDALCFTFASCCALQWGSLVRYLQMNTRFHILGLTLRRGLPRVMQFLVGVLPIFVGFVLFGTVMFGAKVPRFQSASSTATTLFSVANGDEIHDTFNDVAYTPW-IGQIYVYSYMILFSYVVLMVCIGIIEDAFFSAV 511
BLAST of EWM26275.1 vs. NCBI_GenBank
Match: gi|675196429|ref|XP_008907099.1| (hypothetical protein PPTG_13118 [Phytophthora parasitica INRA-310] >gi|568093013|gb|ETN07814.1| hypothetical protein PPTG_13118 [Phytophthora parasitica INRA-310]) HSP 1 Score: 143.665 bits (361), Expect = 1.092e-32 Identity = 72/168 (42.86%), Postives = 103/168 (61.31%), Query Frame = 0
Query: 214 FGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAA 381
F W +AV N + C L + + ++ +L C + W +LV+YL+ R +++ LTL+R +PR+ QFL G+ P+F+G+ L G ++FG P F S S+TA TLF V NGD I + + TPW IG+IYV Y++LFSYVVLM CI I+E+AFFSA
Sbjct: 326 FWFWLVLAV--NVATVVCLLATWRHAYRLSLNDALCFTFASCCALQWGSLVRYLQMNTRFHILGLTLRRGLPRVMQFLVGVLPIFVGFVLFGTVMFGAKVPRFQSASSTATTLFSVANGDEIHDTFNDVAYTPW-IGQIYVYSYMILFSYVVLMVCIGIIEDAFFSAV 490
BLAST of EWM26275.1 vs. NCBI_GenBank
Match: gi|970659965|gb|KUF97560.1| (hypothetical protein AM588_10006732 [Phytophthora nicotianae]) HSP 1 Score: 143.28 bits (360), Expect = 1.900e-32 Identity = 72/168 (42.86%), Postives = 103/168 (61.31%), Query Frame = 0
Query: 214 FGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAA 381
F W +AV N + C L + + ++ +L C + W +LV+YL+ R +++ LTL+R +PR+ QFL G+ P+F+G+ L G ++FG P F S S+TA TLF V NGD I + + TPW IG+IYV Y++LFSYVVLM CI I+E+AFFSA
Sbjct: 351 FWFWLVLAV--NVATVVCLLATWRHAYRLSLNDALCFTFASCCALQWGSLVRYLQMNTRFHILGLTLRRGLPRVMQFLVGVLPIFVGFVLFGTVMFGAKVPRFQSASSTATTLFSVANGDEIHDTFNDVAYTPW-IGQIYVYSYMILFSYVVLMVCIGIIEDAFFSAV 515
BLAST of EWM26275.1 vs. NCBI_GenBank
Match: gi|1214698756|gb|OWZ11701.1| (Mucolipin [Phytophthora megakarya]) HSP 1 Score: 140.969 bits (354), Expect = 6.773e-32 Identity = 72/168 (42.86%), Postives = 103/168 (61.31%), Query Frame = 0
Query: 214 FGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAA 381
F LW + V N + C L + + ++ +L C + W +LV+YL+ R +++ LTL+R +PR+ QFL G+ P+F+G+ L G ++FG P F S S+TA TLF V NGD I + + TPW IG+IYV Y++LFSYVVLM CI I+E+AFFSA
Sbjct: 300 FWLWFVLVV--NFVTVGCLLATWHHAYRLSMNDTLCFTFASCCALQWGSLVRYLQVNTRFHILGLTLRRGLPRVMQFLVGVLPIFVGFVLFGTVMFGAKVPRFQSASSTATTLFSVANGDEIHDTFNDVAYTPW-IGQIYVYSYMILFSYVVLMVCIGIIEDAFFSAV 464
BLAST of EWM26275.1 vs. NCBI_GenBank
Match: gi|970631933|gb|KUF78371.1| (Folate-Biopterin Transporter (FBT) Family [Phytophthora nicotianae]) HSP 1 Score: 142.895 bits (359), Expect = 2.494e-31 Identity = 72/168 (42.86%), Postives = 103/168 (61.31%), Query Frame = 0
Query: 214 FGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAA 381
F W +AV N + C L + + ++ +L C + W +LV+YL+ R +++ LTL+R +PR+ QFL G+ P+F+G+ L G ++FG P F S S+TA TLF V NGD I + + TPW IG+IYV Y++LFSYVVLM CI I+E+AFFSA
Sbjct: 326 FWFWLVLAV--NVATVVCLLATWRHAYRLSLNDALCFTFASCCALQWGSLVRYLQMNTRFHILGLTLRRGLPRVMQFLVGVLPIFVGFVLFGTVMFGAKVPRFQSASSTATTLFSVANGDEIHDTFNDVAYTPW-IGQIYVYSYMILFSYVVLMVCIGIIEDAFFSAV 490
BLAST of EWM26275.1 vs. NCBI_GenBank
Match: gi|1173955657|gb|OQS02592.1| (hypothetical protein THRCLA_05056 [Thraustotheca clavata]) HSP 1 Score: 136.732 bits (343), Expect = 6.552e-31 Identity = 67/155 (43.23%), Postives = 95/155 (61.29%), Query Frame = 0
Query: 248 LRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAAAYAHQLWTQEAEGDKATQDPL 402
L L C + W+ ++YL R ++ LT++R +PR+ +FL G+ P+F+GY L G ++FG+H P F L TA TLF + NGD ++ DSL PW +G+IY+ Y+MLF+YVVLM CI I+E+AFFS+A LW Q T D L
Sbjct: 242 LSLTFATVCALAWITSLRYLHSNERFRILGLTIRRGLPRVIEFLIGVGPLFVGYVLFGSVMFGNHVPRFQGLMTTATTLFAIANGDEVRMTFDSLSTMPW-LGQIYLYSYIMLFTYVVLMVCIGIIEDAFFSSA--FPTLWKQPVALSPDTIDQL 393 The following BLAST results are available for this feature:
BLAST of EWM26275.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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