EWM26275.1, cds4398 (CDS) Nannochloropsis gaditana

Overview
NameEWM26275.1
Unique Namecds4398
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:522756..525020 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26275.1
Productmucolipin-like protein
Orig transcript idgnl|cribi|Naga_100073g1.10383.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:522756..525020 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR013122PKD1_2_channel
Homology
BLAST of EWM26275.1 vs. NCBI_GenBank
Match: gi|585108276|gb|EWM26275.1| (mucolipin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 1510.74 bits (3910), Expect = 0.000e+0
Identity = 754/754 (100.00%), Postives = 754/754 (100.00%), Query Frame = 0
Query:    1 MRGLGPRLLVRSERGRSVSSGYVILAPVPVLALPLQGRLRLALPRDRPVGHLLPTPALPLSLGTLSNPEALAGAHGCVFPEAPRGFKPGPRGSRDRARASQPRHATRERGGQGSRDLDTNTGSHCFRCSGAWACGPRRGRVGGRHSFACRAGSTRALECRCQGGIPHHGSRRSRPQPCPTPPTPRCLPPPPSTPTPPLSNAYHTLTCLDKLEIFGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAAAYAHQLWTQEAEGDKATQDPLYQPLPPPYHHIEDARRRGERGYGPEEVEDQKELQWATSSHPRALRSDEAFRPVLLPQDVHHDEYAGSSSAPPLESALSSSSSSSLHYPASTPSSSNPPAPTPSIGSVQQHYAGSAGNVPLGTLPVASPLLPLRNSPAPRPPPLSTSRLSQVAGTSPSSGSSSPSFPSSLHPSVAPPVSGIKRNASGSRVMSAKLRQLIHEADAVLAHGGQAHGAVGGGGGGGYASHSSDSRGGPRSDAMSMSPVHRGGKGEGGGGEGGEAGWHREEDLQLYLSEALGELETRLLRHVARDKETKTSKGDERGGGVSAEIKQAIGEARSKIRRRPSQGMRRSSSASSLLSSHREAEDEKDEEQ 754
            MRGLGPRLLVRSERGRSVSSGYVILAPVPVLALPLQGRLRLALPRDRPVGHLLPTPALPLSLGTLSNPEALAGAHGCVFPEAPRGFKPGPRGSRDRARASQPRHATRERGGQGSRDLDTNTGSHCFRCSGAWACGPRRGRVGGRHSFACRAGSTRALECRCQGGIPHHGSRRSRPQPCPTPPTPRCLPPPPSTPTPPLSNAYHTLTCLDKLEIFGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAAAYAHQLWTQEAEGDKATQDPLYQPLPPPYHHIEDARRRGERGYGPEEVEDQKELQWATSSHPRALRSDEAFRPVLLPQDVHHDEYAGSSSAPPLESALSSSSSSSLHYPASTPSSSNPPAPTPSIGSVQQHYAGSAGNVPLGTLPVASPLLPLRNSPAPRPPPLSTSRLSQVAGTSPSSGSSSPSFPSSLHPSVAPPVSGIKRNASGSRVMSAKLRQLIHEADAVLAHGGQAHGAVGGGGGGGYASHSSDSRGGPRSDAMSMSPVHRGGKGEGGGGEGGEAGWHREEDLQLYLSEALGELETRLLRHVARDKETKTSKGDERGGGVSAEIKQAIGEARSKIRRRPSQGMRRSSSASSLLSSHREAEDEKDEEQ
Sbjct:    1 MRGLGPRLLVRSERGRSVSSGYVILAPVPVLALPLQGRLRLALPRDRPVGHLLPTPALPLSLGTLSNPEALAGAHGCVFPEAPRGFKPGPRGSRDRARASQPRHATRERGGQGSRDLDTNTGSHCFRCSGAWACGPRRGRVGGRHSFACRAGSTRALECRCQGGIPHHGSRRSRPQPCPTPPTPRCLPPPPSTPTPPLSNAYHTLTCLDKLEIFGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAAAYAHQLWTQEAEGDKATQDPLYQPLPPPYHHIEDARRRGERGYGPEEVEDQKELQWATSSHPRALRSDEAFRPVLLPQDVHHDEYAGSSSAPPLESALSSSSSSSLHYPASTPSSSNPPAPTPSIGSVQQHYAGSAGNVPLGTLPVASPLLPLRNSPAPRPPPLSTSRLSQVAGTSPSSGSSSPSFPSSLHPSVAPPVSGIKRNASGSRVMSAKLRQLIHEADAVLAHGGQAHGAVGGGGGGGYASHSSDSRGGPRSDAMSMSPVHRGGKGEGGGGEGGEAGWHREEDLQLYLSEALGELETRLLRHVARDKETKTSKGDERGGGVSAEIKQAIGEARSKIRRRPSQGMRRSSSASSLLSSHREAEDEKDEEQ 754          
BLAST of EWM26275.1 vs. NCBI_GenBank
Match: gi|695452558|ref|XP_009535996.1| (hypothetical protein PHYSODRAFT_526427 [Phytophthora sojae] >gi|348668000|gb|EGZ07824.1| hypothetical protein PHYSODRAFT_526427 [Phytophthora sojae])

HSP 1 Score: 144.821 bits (364), Expect = 2.386e-33
Identity = 74/168 (44.05%), Postives = 103/168 (61.31%), Query Frame = 0
Query:  214 FGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAA 381
            F  W  +AV  N   + C L +      + +D +L       C + W +LV+YL+   R +++ LTL+R +PR+ QFL G+ P+F+G+ L G ++FG   P F S SATA TLF V NGD I    + +  TPW IG+IYV  Y++LFSYVVLM CI I+E+AFFSA 
Sbjct:  285 FWFWFVLAV--NFMTVMCLLATWRHAYRLSLDDTLCFTFASCCALQWGSLVRYLQVNTRFHILGLTLRRGLPRVMQFLVGVLPIFVGFVLFGTVMFGAKVPRFQSASATATTLFSVANGDEIHDTFNDVAYTPW-IGQIYVYSYMILFSYVVLMVCIGIIEDAFFSAV 449          
BLAST of EWM26275.1 vs. NCBI_GenBank
Match: gi|301089633|ref|XP_002895097.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262102220|gb|EEY60272.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 144.05 bits (362), Expect = 4.285e-33
Identity = 71/168 (42.26%), Postives = 105/168 (62.50%), Query Frame = 0
Query:  214 FGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAA 381
            F  W  +AV  N   + C L +      + ++ +L L   L C + W +LV+Y++   R +++ LTL+R +PR+ QFL G+ P+F+G+ L G ++FG   P F + S+TA TLF V NGD I    + +  TPW +G+IYV  Y++LFSYVVLM CI I+E+AFFSA 
Sbjct:  280 FWFWFVLAV--NFATVTCLLATWRHAYRLSLNDTLCLTFALCCALQWCSLVRYMQVNTRFHILGLTLRRGLPRVMQFLVGVLPIFVGFVLFGTVMFGAKVPRFQTASSTATTLFSVANGDEIHDTFNDVAYTPW-VGQIYVYSYMILFSYVVLMVCIGIIEDAFFSAV 444          
BLAST of EWM26275.1 vs. NCBI_GenBank
Match: gi|566021248|gb|ETI44159.1| (hypothetical protein F443_11119 [Phytophthora parasitica P1569] >gi|567958608|gb|ETK84195.1| hypothetical protein L915_10836 [Phytophthora parasitica] >gi|567987325|gb|ETL37632.1| hypothetical protein L916_10729 [Phytophthora parasitica] >gi|568016601|gb|ETL90778.1| hypothetical protein L917_10633 [Phytophthora parasitica] >gi|568046971|gb|ETM44073.1| hypothetical protein L914_10679 [Phytophthora parasitica] >gi|570324887|gb|ETO72835.1| hypothetical protein F444_11190 [Phytophthora parasitica P1976] >gi|570948753|gb|ETP14010.1| hypothetical protein F441_11028 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 144.436 bits (363), Expect = 7.489e-33
Identity = 72/168 (42.86%), Postives = 103/168 (61.31%), Query Frame = 0
Query:  214 FGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAA 381
            F  W  +AV  N   + C L +      + ++ +L       C + W +LV+YL+   R +++ LTL+R +PR+ QFL G+ P+F+G+ L G ++FG   P F S S+TA TLF V NGD I    + +  TPW IG+IYV  Y++LFSYVVLM CI I+E+AFFSA 
Sbjct:  347 FWFWLVLAV--NVATVVCLLATWRHAYRLSLNDALCFTFASCCALQWGSLVRYLQMNTRFHILGLTLRRGLPRVMQFLVGVLPIFVGFVLFGTVMFGAKVPRFQSASSTATTLFSVANGDEIHDTFNDVAYTPW-IGQIYVYSYMILFSYVVLMVCIGIIEDAFFSAV 511          
BLAST of EWM26275.1 vs. NCBI_GenBank
Match: gi|570981692|gb|ETP42059.1| (hypothetical protein F442_11021 [Phytophthora parasitica P10297])

HSP 1 Score: 144.436 bits (363), Expect = 7.773e-33
Identity = 72/168 (42.86%), Postives = 103/168 (61.31%), Query Frame = 0
Query:  214 FGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAA 381
            F  W  +AV  N   + C L +      + ++ +L       C + W +LV+YL+   R +++ LTL+R +PR+ QFL G+ P+F+G+ L G ++FG   P F S S+TA TLF V NGD I    + +  TPW IG+IYV  Y++LFSYVVLM CI I+E+AFFSA 
Sbjct:  347 FWFWLVLAV--NVATVVCLLATWRHAYRLSLNDALCFTFASCCALQWGSLVRYLQMNTRFHILGLTLRRGLPRVMQFLVGVLPIFVGFVLFGTVMFGAKVPRFQSASSTATTLFSVANGDEIHDTFNDVAYTPW-IGQIYVYSYMILFSYVVLMVCIGIIEDAFFSAV 511          
BLAST of EWM26275.1 vs. NCBI_GenBank
Match: gi|675196429|ref|XP_008907099.1| (hypothetical protein PPTG_13118 [Phytophthora parasitica INRA-310] >gi|568093013|gb|ETN07814.1| hypothetical protein PPTG_13118 [Phytophthora parasitica INRA-310])

HSP 1 Score: 143.665 bits (361), Expect = 1.092e-32
Identity = 72/168 (42.86%), Postives = 103/168 (61.31%), Query Frame = 0
Query:  214 FGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAA 381
            F  W  +AV  N   + C L +      + ++ +L       C + W +LV+YL+   R +++ LTL+R +PR+ QFL G+ P+F+G+ L G ++FG   P F S S+TA TLF V NGD I    + +  TPW IG+IYV  Y++LFSYVVLM CI I+E+AFFSA 
Sbjct:  326 FWFWLVLAV--NVATVVCLLATWRHAYRLSLNDALCFTFASCCALQWGSLVRYLQMNTRFHILGLTLRRGLPRVMQFLVGVLPIFVGFVLFGTVMFGAKVPRFQSASSTATTLFSVANGDEIHDTFNDVAYTPW-IGQIYVYSYMILFSYVVLMVCIGIIEDAFFSAV 490          
BLAST of EWM26275.1 vs. NCBI_GenBank
Match: gi|970659965|gb|KUF97560.1| (hypothetical protein AM588_10006732 [Phytophthora nicotianae])

HSP 1 Score: 143.28 bits (360), Expect = 1.900e-32
Identity = 72/168 (42.86%), Postives = 103/168 (61.31%), Query Frame = 0
Query:  214 FGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAA 381
            F  W  +AV  N   + C L +      + ++ +L       C + W +LV+YL+   R +++ LTL+R +PR+ QFL G+ P+F+G+ L G ++FG   P F S S+TA TLF V NGD I    + +  TPW IG+IYV  Y++LFSYVVLM CI I+E+AFFSA 
Sbjct:  351 FWFWLVLAV--NVATVVCLLATWRHAYRLSLNDALCFTFASCCALQWGSLVRYLQMNTRFHILGLTLRRGLPRVMQFLVGVLPIFVGFVLFGTVMFGAKVPRFQSASSTATTLFSVANGDEIHDTFNDVAYTPW-IGQIYVYSYMILFSYVVLMVCIGIIEDAFFSAV 515          
BLAST of EWM26275.1 vs. NCBI_GenBank
Match: gi|1214698756|gb|OWZ11701.1| (Mucolipin [Phytophthora megakarya])

HSP 1 Score: 140.969 bits (354), Expect = 6.773e-32
Identity = 72/168 (42.86%), Postives = 103/168 (61.31%), Query Frame = 0
Query:  214 FGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAA 381
            F LW  + V  N   + C L +      + ++ +L       C + W +LV+YL+   R +++ LTL+R +PR+ QFL G+ P+F+G+ L G ++FG   P F S S+TA TLF V NGD I    + +  TPW IG+IYV  Y++LFSYVVLM CI I+E+AFFSA 
Sbjct:  300 FWLWFVLVV--NFVTVGCLLATWHHAYRLSMNDTLCFTFASCCALQWGSLVRYLQVNTRFHILGLTLRRGLPRVMQFLVGVLPIFVGFVLFGTVMFGAKVPRFQSASSTATTLFSVANGDEIHDTFNDVAYTPW-IGQIYVYSYMILFSYVVLMVCIGIIEDAFFSAV 464          
BLAST of EWM26275.1 vs. NCBI_GenBank
Match: gi|970631933|gb|KUF78371.1| (Folate-Biopterin Transporter (FBT) Family [Phytophthora nicotianae])

HSP 1 Score: 142.895 bits (359), Expect = 2.494e-31
Identity = 72/168 (42.86%), Postives = 103/168 (61.31%), Query Frame = 0
Query:  214 FGLWPAVAVLGNTFALACTLQSLTTHVDIFVDPSLRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAA 381
            F  W  +AV  N   + C L +      + ++ +L       C + W +LV+YL+   R +++ LTL+R +PR+ QFL G+ P+F+G+ L G ++FG   P F S S+TA TLF V NGD I    + +  TPW IG+IYV  Y++LFSYVVLM CI I+E+AFFSA 
Sbjct:  326 FWFWLVLAV--NVATVVCLLATWRHAYRLSLNDALCFTFASCCALQWGSLVRYLQMNTRFHILGLTLRRGLPRVMQFLVGVLPIFVGFVLFGTVMFGAKVPRFQSASSTATTLFSVANGDEIHDTFNDVAYTPW-IGQIYVYSYMILFSYVVLMVCIGIIEDAFFSAV 490          
BLAST of EWM26275.1 vs. NCBI_GenBank
Match: gi|1173955657|gb|OQS02592.1| (hypothetical protein THRCLA_05056 [Thraustotheca clavata])

HSP 1 Score: 136.732 bits (343), Expect = 6.552e-31
Identity = 67/155 (43.23%), Postives = 95/155 (61.29%), Query Frame = 0
Query:  248 LRLLLGLACLMLWLALVQYLEFEARHYVMILTLKRAVPRIGQFLFGIAPMFLGYALLGMILFGDHNPYFGSLSATAGTLFCVVNGDSIKAVLDSLRDTPWGIGEIYVSLYVMLFSYVVLMTCIAIVEEAFFSAAAYAHQLWTQEAEGDKATQDPL 402
            L L     C + W+  ++YL    R  ++ LT++R +PR+ +FL G+ P+F+GY L G ++FG+H P F  L  TA TLF + NGD ++   DSL   PW +G+IY+  Y+MLF+YVVLM CI I+E+AFFS+A     LW Q       T D L
Sbjct:  242 LSLTFATVCALAWITSLRYLHSNERFRILGLTIRRGLPRVIEFLIGVGPLFVGYVLFGSVMFGNHVPRFQGLMTTATTLFAIANGDEVRMTFDSLSTMPW-LGQIYLYSYIMLFTYVVLMVCIGIIEDAFFSSA--FPTLWKQPVALSPDTIDQL 393          
The following BLAST results are available for this feature:
BLAST of EWM26275.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108276|gb|EWM26275.1|0.000e+0100.00mucolipin-like protein [Nannochloropsis gaditana][more]
gi|695452558|ref|XP_009535996.1|2.386e-3344.05hypothetical protein PHYSODRAFT_526427 [Phytophtho... [more]
gi|301089633|ref|XP_002895097.1|4.285e-3342.26conserved hypothetical protein [Phytophthora infes... [more]
gi|566021248|gb|ETI44159.1|7.489e-3342.86hypothetical protein F443_11119 [Phytophthora para... [more]
gi|570981692|gb|ETP42059.1|7.773e-3342.86hypothetical protein F442_11021 [Phytophthora para... [more]
gi|675196429|ref|XP_008907099.1|1.092e-3242.86hypothetical protein PPTG_13118 [Phytophthora para... [more]
gi|970659965|gb|KUF97560.1|1.900e-3242.86hypothetical protein AM588_10006732 [Phytophthora ... [more]
gi|1214698756|gb|OWZ11701.1|6.773e-3242.86Mucolipin [Phytophthora megakarya][more]
gi|970631933|gb|KUF78371.1|2.494e-3142.86Folate-Biopterin Transporter (FBT) Family [Phytoph... [more]
gi|1173955657|gb|OQS02592.1|6.552e-3143.23hypothetical protein THRCLA_05056 [Thraustotheca c... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4408rna4408Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications