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Properties
| Property Name | Value |
|---|
| Product | conserved unknown protein |
| Orig transcript id | gnl|cribi|Naga_100073g8.10389.mrna |
| Orig protein id | gnl|cribi|Naga_100073g8.10389 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:498764..500389 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4402 ID=rna4402|Name=rna4402|organism=Nannochloropsis gaditana|type=mRNA|length=726bp
ATGCCAGCTTCCGCGGGCCGTGTGAAAATGCCACACAACAATCGGATGTC
CAGTTCGGCTGCGCTGGGGACAAGCAACATGTGGAAAAATGTGATCAAGT
ACGACCCTTACGCGAACGATGAAGATGCTGCTGCGGAAGCGGCCGCCGCC
GAGCTCGCGGCGGAGCAGCAGCGGGGCTTAATGGACGTCGTACGGATCAA
GGCGCGGGAGACGCTGGGCACGGAGAGCAAACGTGGCGCTTGTAGAAAAT
GCGGCAACATGGGGCACCTCACGTATCAGTGTCGGAACCATTTGGGAGGA
AACAACCGTGCCGCAGACTCGGAGAGTGAGAGCAGTGACGAGGATAGTGT
GGAAAGCGCCGAGGAAGTCGTGGAGGCAAGGGCGGCAGCAGCGGCAGCGA
TGACTAGCAGGGGGGATGGGAATGGGTCCCGGAAGCGCAAGCAAGAGAGC
AGCAGTGGTGGCTCCAGTGACAGCGAGGAAAGCGAGGGCAGCAGTGAAGC
GGAAGAGAGGCGGGAGCGGAGACGAGAGCGGGAAGGCCGAAGGAGCGCTA
GCGTGAAGAAGCGGAAGAAGGAGAGCAAGAAGAGGCATAAAAAGGAGAAG
ATGCATAAAAAGGAGAAAAAGCGCAAAAAGAAGCATTCGCATAGATAGCC
ACGTAACTCTATCAAATAGTAATGTGTCCAGCGCATCGCTAGGCAAGCAC
TCGTAATGAAGAAAAGTCTCCCTGTA back to topprotein sequence of rna4402 >rna4402-protein ID=rna4402-protein|Name=rna4402|organism=Nannochloropsis gaditana|type=polypeptide|length=242bp
MAAIRFVATSVLSSDDGVSYKTEQLEDEEAHKKRLEKEKAAHSRTLWEQL
EEQKEKKKAEYDAVTKQIFAPPKALDEEEASYLDGILEQEKARERRRAEE
EERELAAFSLARANRDLNHTQHDTLVEDARGVAEGTGGAETQGKRLDSGR
SGSSGATVAGNGNGKRAFPEVKINVKIKRKGKSGKTSEGGSKGSLSSSNI
DDDKDSGHKKQKRDEEERKEKAPSTANSLSMLAAYASDEDEE back to topmRNA from alignment at CM002463.1:498764..500389+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4402 ID=rna4402|Name=rna4402|organism=Nannochloropsis gaditana|type=mRNA|length=1626bp|location=Sequence derived from alignment at CM002463.1:498764..500389+ (Nannochloropsis gaditana)
GGGCTTGAGTGAGTAATTGTGCGACAGAATACCGGACAGCACCTGTATAT
CTCGGGAACAACGGGAGGACATTGTCACAGAGCGTGGTACTGGTGGGTTG
AAAAGCACCACAAACATACTCCGAGCGCAAAAAGGGCCTGTAAAAAGATT
TGCCGGACTCCAAAAAGTGGACAGGGGCATAAAGTGCTTCATTTTGGGCC
TCGATGCACCTACAAAGCCAGAGGACGCGGACAGTGTGGTGTGTATACTG
TGGCATGTGGGTAATTCGATCTTCAGGATCTGTTCCCGTCGGGCGCTTTG
AGCGTGCGCTTTTAGGTGTAAAGGTTCCTTGACTTCCCACCGAAGGGCAT
GTAAAACGTGCATACATATTAAAGGAAGACACATTCTCTTGGACAAGGAA
GTCAAGAGCTGGTTTCCTCAATGCTTTCTAAACGCGCAATAGAAGACTTA
AATGCTAACTAGCACCTCAGACAGGCTGAGGGGAAGTCACTCTTTATCAA
CGAGCATGGCAACGAATGATTATCGGAGCAAAGGTCCATGCGTGCTCTCA
TGCTATTGCCATGTCGTATTGCTTGAGACTGTGCTGAATATACCCCTCGg
tgctctcctccgccgcacGAAACTTACAGCGTGCGGCCCCCCCTTCGTAC
CTTGAAGCCTCGCTTTCATCTCACCTGGCATCTCATTTTCCATTTAACGA
GGACAAAATAATTCACGGAATTTGTGCAAGATGGCAGCTATTCGATTCGT
TGCCACATCTGTGCTGTCATCGGATGACGGGGTAAGTATGTGTTGCTTTC
CTGTTCTTCCTGTCTGCTTGTCTAAGCAGAAGCATCCTCTTGCACGTTTT
CTGGTGATTAGGTGTCGTACAAAACAGAACAattggaagacgaggaagct
cATAAAAAAAGAttggaaaaagaaaaagcagcacACAGTCGCACTTTGTG
GGAGCAATTGGAGgagcaaaaagaaaagaagaaggccgAGTACGACGCTG
TAACCAAACAGatcttcgcccctcccaaggcgttggatgaagaggaggct
aGTTATCTCGACGGAATCCTCGAACAAGAAAAGGCACGGGAGCGTCGTCg
ggctgaagaggaggagcgggagctggCGGCGTTCTCTCTCGCGCGGGCTA
ACAGGGACTTGAACCACACGCAGCACGACACTTTGGTGGAAGACGCGCGA
GGGGTCGCGGAGGGCACAGGGGGTGCCGAGACACAAGGAAAGCGTCTGGA
CTCGGGGCGAAGCGGCAGTAGTGGTGCAACTGTTGCAGGAAATGGCAATG
GCAAGAGGGCTTTCCCTGAGGTAAAAATCAACGTCAAAATCAAACGCAAA
GGCAAATCTGGCAAGACTtcagaaggagggagtaaAGGGAGCCTTTCCAG
CAGCAACATTGACGACGACAAAGATAGCGGTCataaaaagcaaaaaagag
acgaggaggagcgtaaAGAGAAAGCCCCATCGACTGCCAACTCCCTGAGC
ATGCTAGCCGCGTACGCGagtgacgaggacgaggagtaaAAAACGCAGGA
GGATGTGCTTTCGAAGCGAGACGGGGAGAGGCAAGCTCCATCAAAAAGAA
GACAAAGTGTACAGCACGGCTAATTT back to topCoding sequence (CDS) from alignment at CM002463.1:498764..500389+ >rna4402 ID=rna4402|Name=rna4402|organism=Nannochloropsis gaditana|type=CDS|length=1458bp|location=Sequence derived from alignment at CM002463.1:498764..500389+ (Nannochloropsis gaditana)
ATGGCAGCTATTCGATTCGTTGCCACATCTGTGCTGTCATCGGATGACGG
GGTGTCGTACAAAACAGAACAattggaagacgaggaagctcATAAAAAAA
GAttggaaaaagaaaaagcagcacACAGTCGCACTTTGTGGGAGCAATTG
GAGgagcaaaaagaaaagaagaaggccgAGTACGACGCTGTAACCAAACA
GatcttcgcccctcccaaggcgttggatgaagaggaggctaGTTATCTCG
ACGGAATCCTCGAACAAGAAAAGGCACGGGAGCGTCGTCgggctgaagag
gaggagcgggagctggCGGCGTTCTCTCTCGCGCGGGCTAACAGGGACTT
GAACCACACGCAGCACGACACTTTGGTGGAAGACGCGCGAGGGGTCGCGG
AGGGCACAGGGGGTGCCGAGACACAAGGAAAGCGTCTGGACTCGGGGCGA
AGCGGCAGTAGTGGTGCAACTGTTGCAGGAAATGGCAATGGCAAGAGGGC
TTTCCCTGAGGTAAAAATCAACGTCAAAATCAAACGCAAAGGCAAATCTG
GCAAGACTtcagaaggagggagtaaAGGGAGCCTTTCCAGCAGCAACATT
GACGACGACAAAGATAGCGGTCataaaaagcaaaaaagagacgaggagga
gcgtaaAGAGAAAGCCCCATCGACTGCCAACTCCCTGAGCATGCTAGCCG
CGTACGCGagtgacgaggacgaggagtaaATGGCAGCTATTCGATTCGTT
GCCACATCTGTGCTGTCATCGGATGACGGGGTGTCGTACAAAACAGAACA
attggaagacgaggaagctcATAAAAAAAGAttggaaaaagaaaaagcag
cacACAGTCGCACTTTGTGGGAGCAATTGGAGgagcaaaaagaaaagaag
aaggccgAGTACGACGCTGTAACCAAACAGatcttcgcccctcccaaggc
gttggatgaagaggaggctaGTTATCTCGACGGAATCCTCGAACAAGAAA
AGGCACGGGAGCGTCGTCgggctgaagaggaggagcgggagctggCGGCG
TTCTCTCTCGCGCGGGCTAACAGGGACTTGAACCACACGCAGCACGACAC
TTTGGTGGAAGACGCGCGAGGGGTCGCGGAGGGCACAGGGGGTGCCGAGA
CACAAGGAAAGCGTCTGGACTCGGGGCGAAGCGGCAGTAGTGGTGCAACT
GTTGCAGGAAATGGCAATGGCAAGAGGGCTTTCCCTGAGGTAAAAATCAA
CGTCAAAATCAAACGCAAAGGCAAATCTGGCAAGACTtcagaaggaggga
gtaaAGGGAGCCTTTCCAGCAGCAACATTGACGACGACAAAGATAGCGGT
CataaaaagcaaaaaagagacgaggaggagcgtaaAGAGAAAGCCCCATC
GACTGCCAACTCCCTGAGCATGCTAGCCGCGTACGCGagtgacgaggacg
aggagtaa back to top
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