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Properties
| Property Name | Value |
|---|
| Product | replication factor c subunit 3 |
| Orig transcript id | gnl|cribi|Naga_100093g7.5095.mrna |
| Orig protein id | gnl|cribi|Naga_100093g7.5095 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:433104..434515 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4381 ID=rna4381|Name=rna4381|organism=Nannochloropsis gaditana|type=mRNA|length=1279bp
TGCTGTGATTTTTTAACCATTAGCTCAGGCTGCCTCAGGTTATTCCTGAA
GCCGGAGGTAGTTATGAAGGTGCTTTGTCATATTCAAAGGTCTTTGCAGC
GGTACACCGTGTTAAAAACTAGACACTTCATCCGTAGTCGCCCAGTGATG
TACCATTTCATTTCCTTTCTCCTCAGACTAGGTGTTGCTTGCCTTGTCAG
CATCTGCGCTCCACTTTGCGGGTAGCCGGTGCAACACGTCATCGCTCTCA
TTTGACATCGGTGGGGACCACAAAGGATGCTGTACCGTGCCATAAGCAGC
TGGCGGAGGGAGTCAATGAGCCTTTTCACTGCTGGCGCCAAGAGGCGGAG
GAGAACAATTGTACCGGTCGGGGGCATTTGGTCTCAAACCTGCAACGCAG
GGTGTGTGTCGACTATCATGCCTGCCAGTCCGCAAACGGGAGGATCTTGC
GTTCGATCGGCATCATTTCGCCGTGGATACTTGCCCCTGTCTTCCCGGTC
CGCTCTCCTCGGCGCCTTGGGCTGTTCCTACCCCCAACCTCAAGTGCGGC
TCCTTGGGACGGCGGCGAGCCTGAATGCACGACCGTCTTCACCTCCGCAA
CCCCCCTTCGATTGGATAGGCTTGGAGGAAGAGAAAAAAATATGGGGCGA
TTTCGAAAGCAATGGCGAAGCTGTTTTGGTGCAAGATCTGCGAAGTGACC
ATGCGGGAGAGACCGGTGCGGTGTACATCTACGCAGGAGCCCAAGCGGCC
ATGAAATGGGGAGGTGGGGGCCGCTTCTCGGCGGAATCCCGGGCCTTCGT
TCAGACGCACCATGCCACAGAGTCCGAGCACTTGGCTTACTTTGAAAGAC
TCCTGGACCCAGGCATGAAATCCAAGCTCCTCCCTTTCTGGCGAATCAGT
GGCTGGTGCTTGGGATTCTTTCCGACATTGTTGGGTGGGGAATCGGCACT
GTTTTTGACCGTGGAGGCGGTCGAGACCTTCGTGGAAGCACACTACCAGG
AGCAGATCTACCCTTTGCAGTGCAGTGGGCGTTTTCCTGAGCTTCTCAAA
CTCTTGAGGCATTGCTGCGATGAAGAAGTACACCACAAAGAAGACGCACA
GGCCCGTTGGCTGCAAGGGCGGGGCTTTGGGGAGGTTGAGGACAGGCCCC
GCCTTGCGCGCTTGTGGGCATGGGTGGTGGGAACGGGGAGTAGGGCGGCT
GTGGCCGTGTGCCGCAAGATATGAGGATACTGACATTTGAAATATAGAAA
AATAAGGCAGGTGAAATAGTTCTGGGCAA back to topprotein sequence of rna4381 >rna4381-protein ID=rna4381-protein|Name=rna4381|organism=Nannochloropsis gaditana|type=polypeptide|length=357bp
MLWVDKHRPTTLAKMDYHEDLTARLEALSEDGEVPHLLFYGPPGAGKKTR
IMALLRQVFGAGVEKTRLEHKTFKTPTKRTIELTILASAFHQEINAAEAG
SGDRFVVQEVIKEIAQSYNPAAAMGQAGGRAYKVVILTEVDRLSRQAQAA
LRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGIRVAAPSHESICAILN
KVSKKESCGVLPEALAMRIAQTSGRNLRRALLMLEACRVQQHPFSAEQEV
KVPDWEEYIAKLAVLLTEEQSPQRLVLARDMLYELLTNCIPSDVILKTLL
RELLPKLDDQLKHEVVHWAAFYEHRVRIGSKEIFHLEAFVAKFMALYKAF
VINTFGF back to topmRNA from alignment at CM002463.1:433104..434515- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna4381 ID=rna4381|Name=rna4381|organism=Nannochloropsis gaditana|type=mRNA|length=1412bp|location=Sequence derived from alignment at CM002463.1:433104..434515- (Nannochloropsis gaditana)
CAAGCCAGCTTTCCCCTGTGTGTATTACACGCCCTGTTGGATGATACGCC
TGTCTCTTATACATCCGCGACGCATCATGCCCTCAGAAGTCTGCTCGTCT
ATTTGCCTGAGCAGGAATCATGTTGTGGGTGGATAAACACCGGCCTACAA
CTTTGGCGAAGATGGACTATCACGAGGACCTGACGGCGCGTCTTGAGGCC
CTTTCTGAGGACGGAGAAGTACCACATTTGCTCTTCTACGGACCACCTGG
GGCCGGCAAAAAGACGCGAATCATGGCGTTGCTTCGTCAAGTGTTCGGGG
CTGGCGTGGAGAAGACCAGATTGGAACACAAAACGTTCAAGACGCCAACT
AAAAGAACGATCGAACTAACGATTTTGGCATCGGCCTTCCATCAAGAAAT
CAATGCCGCAGAGGCCGGGTCAGGCGATAGATTTGTTGTGCAGGAGGTAA
TCAAGGAAATAGCTCAGTCATACAACCCTGCTGCAGCCATGGGGCAGGCG
GGGGGCCGAGCGTATAAGGTAGTTATCCTGACGGAAGTCGACAGGCTAAG
TCGCCAGGCCCAAGCAGCCCTGCGTCGAACAATGGAGAAATACACGGCCG
CCTGCCGCCTGATCTTATGCTGTAACAGTGCCTCCAGAGTGATCGAGCCT
GTCCGCTCACGATGCCTGGGGATCAGGGTGGCGGCGCCGTCGCATGAAAG
CATTTGTGCCATTCTCAACAAAGTTTCCAAGAAAGAGTCCTGCGGGGTCT
TGCCAGAGGCGTTGGCCATGCGCATCGCTCAAACCTCAGGCCGCAATTTG
CGTCGGGCTCTCCTCATGCTTGAGGCCTGCCGCGTGCAGCAACATCCTTT
CTCGGCCGAGCAGGAGGTAAAAGTACCGGATTGGGAGGAGTACATTGCCA
AGCTCGCCGTCTTACTCACGGAGGAGCAAAGCCCGCAACGCCTAGTCTTG
GCGCGCGACATGTTGTACGAGCTCTTGACGAACTGCATCCCTTCGGACGT
GATCCTCAAGACGCTGCTCCGCGAGCTCCTGCCCAAGCTCGATGACCAGC
TCAAGCACGAGGTCGTGCATTGGGCTGCGTTCTACGAGCATCGGGTCCGG
ATCGGGAGCAAGGAGATCTTCCACCTGGAGGCGTTTGTGGCCAAGTTTAT
GGCATTGTACAAGGCGTTTGTCATCAACACCTTTGGATTTTGAAAGGGAG
GAGAACAAGGGCGAGGTACCGGGAACTGCAAACCTGCACAGCATTGCATC
GTGTCAGACAAAACGAAAATGAAGATAAACTTGACGCATGATAAGCTGAA
GGGGTTGCCCAGAACTATTTCACCTGCCTTATTTTTCTATATTTCAAATG
TCAGTATCCTCATATCTTGCGGCACACGGCCACAGCCGCCCTACTCCCCG
TTCCCACCACCC back to topCoding sequence (CDS) from alignment at CM002463.1:433104..434515- >rna4381 ID=rna4381|Name=rna4381|organism=Nannochloropsis gaditana|type=CDS|length=1074bp|location=Sequence derived from alignment at CM002463.1:433104..434515- (Nannochloropsis gaditana)
ATGTTGTGGGTGGATAAACACCGGCCTACAACTTTGGCGAAGATGGACTA
TCACGAGGACCTGACGGCGCGTCTTGAGGCCCTTTCTGAGGACGGAGAAG
TACCACATTTGCTCTTCTACGGACCACCTGGGGCCGGCAAAAAGACGCGA
ATCATGGCGTTGCTTCGTCAAGTGTTCGGGGCTGGCGTGGAGAAGACCAG
ATTGGAACACAAAACGTTCAAGACGCCAACTAAAAGAACGATCGAACTAA
CGATTTTGGCATCGGCCTTCCATCAAGAAATCAATGCCGCAGAGGCCGGG
TCAGGCGATAGATTTGTTGTGCAGGAGGTAATCAAGGAAATAGCTCAGTC
ATACAACCCTGCTGCAGCCATGGGGCAGGCGGGGGGCCGAGCGTATAAGG
TAGTTATCCTGACGGAAGTCGACAGGCTAAGTCGCCAGGCCCAAGCAGCC
CTGCGTCGAACAATGGAGAAATACACGGCCGCCTGCCGCCTGATCTTATG
CTGTAACAGTGCCTCCAGAGTGATCGAGCCTGTCCGCTCACGATGCCTGG
GGATCAGGGTGGCGGCGCCGTCGCATGAAAGCATTTGTGCCATTCTCAAC
AAAGTTTCCAAGAAAGAGTCCTGCGGGGTCTTGCCAGAGGCGTTGGCCAT
GCGCATCGCTCAAACCTCAGGCCGCAATTTGCGTCGGGCTCTCCTCATGC
TTGAGGCCTGCCGCGTGCAGCAACATCCTTTCTCGGCCGAGCAGGAGGTA
AAAGTACCGGATTGGGAGGAGTACATTGCCAAGCTCGCCGTCTTACTCAC
GGAGGAGCAAAGCCCGCAACGCCTAGTCTTGGCGCGCGACATGTTGTACG
AGCTCTTGACGAACTGCATCCCTTCGGACGTGATCCTCAAGACGCTGCTC
CGCGAGCTCCTGCCCAAGCTCGATGACCAGCTCAAGCACGAGGTCGTGCA
TTGGGCTGCGTTCTACGAGCATCGGGTCCGGATCGGGAGCAAGGAGATCT
TCCACCTGGAGGCGTTTGTGGCCAAGTTTATGGCATTGTACAAGGCGTTT
GTCATCAACACCTTTGGATTTTGA back to top
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