EWM26298.1, cds4371 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26298.1 vs. NCBI_GenBank
Match: gi|585108304|gb|EWM26298.1| (replication factor c subunit 3 [Nannochloropsis gaditana]) HSP 1 Score: 736.102 bits (1899), Expect = 0.000e+0 Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0 Query: 1 MLWVDKHRPTTLAKMDYHEDLTARLEALSEDGEVPHLLFYGPPGAGKKTRIMALLRQVFGAGVEKTRLEHKTFKTPTKRTIELTILASAFHQEINAAEAGSGDRFVVQEVIKEIAQSYNPAAAMGQAGGRAYKVVILTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGIRVAAPSHESICAILNKVSKKESCGVLPEALAMRIAQTSGRNLRRALLMLEACRVQQHPFSAEQEVKVPDWEEYIAKLAVLLTEEQSPQRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVHWAAFYEHRVRIGSKEIFHLEAFVAKFMALYKAFVINTFGF 357 MLWVDKHRPTTLAKMDYHEDLTARLEALSEDGEVPHLLFYGPPGAGKKTRIMALLRQVFGAGVEKTRLEHKTFKTPTKRTIELTILASAFHQEINAAEAGSGDRFVVQEVIKEIAQSYNPAAAMGQAGGRAYKVVILTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGIRVAAPSHESICAILNKVSKKESCGVLPEALAMRIAQTSGRNLRRALLMLEACRVQQHPFSAEQEVKVPDWEEYIAKLAVLLTEEQSPQRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVHWAAFYEHRVRIGSKEIFHLEAFVAKFMALYKAFVINTFGF Sbjct: 1 MLWVDKHRPTTLAKMDYHEDLTARLEALSEDGEVPHLLFYGPPGAGKKTRIMALLRQVFGAGVEKTRLEHKTFKTPTKRTIELTILASAFHQEINAAEAGSGDRFVVQEVIKEIAQSYNPAAAMGQAGGRAYKVVILTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGIRVAAPSHESICAILNKVSKKESCGVLPEALAMRIAQTSGRNLRRALLMLEACRVQQHPFSAEQEVKVPDWEEYIAKLAVLLTEEQSPQRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVHWAAFYEHRVRIGSKEIFHLEAFVAKFMALYKAFVINTFGF 357
BLAST of EWM26298.1 vs. NCBI_GenBank
Match: gi|676378035|ref|XP_009032296.1| (hypothetical protein AURANDRAFT_69595 [Aureococcus anophagefferens] >gi|323456769|gb|EGB12635.1| hypothetical protein AURANDRAFT_69595 [Aureococcus anophagefferens]) HSP 1 Score: 477.633 bits (1228), Expect = 1.521e-166 Identity = 229/356 (64.33%), Postives = 278/356 (78.09%), Query Frame = 0 Query: 1 MLWVDKHRPTTLAKMDYHEDLTARLEALSEDGEVPHLLFYGPPGAGKKTRIMALLRQVFGAGVEKTRLEHKTFKTPTKRTIELTILASAFHQEINAAEAGSGDRFVVQEVIKEIAQSYNPAAAMGQAGGRAYKVVILTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGIRVAAPSHESICAILNKVSKKESCGVLPEALAMRIAQTSGRNLRRALLMLEACRVQQHPFSAEQEVKVPDWEEYIAKLAVLLTEEQSPQRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVHWAAFYEHRVRIGSKEIFHLEAFVAKFMALYKAFVINTFG 356 MLWVDKHRP L KM YH +L+ RL L+ DG++PHLLFYGP GAGKKTRIMALLR ++GAG EK RLEH+ FKTPT + IE+T +AS +H EIN ++AG+ DR+VVQEVIKEIAQS + G G YKVV+L EVDRL+RQAQA LRRTMEK T++CRLILCCN+ S+VI+P+RSRCLGIRVAAP+ I A+L+ V+ +E LP ALA RIA+ S RNLRRA+L LE C+VQQ+PF A Q V +PDWE+Y+ +A + EQSPQRL+ RD LYELL+ CIP+DVILKTL RELL LDD++K EV+ WAAFYEHR+ G+KEIFHLEAFVAKFM LYK F++ F Sbjct: 1 MLWVDKHRPLELGKMSYHGELSERLATLAADGDIPHLLFYGPSGAGKKTRIMALLRALYGAGAEKQRLEHRDFKTPTNKAIEVTTVASNYHIEINPSDAGNNDRYVVQEVIKEIAQS--GSLHKGDKGRVGYKVVLLVEVDRLTRQAQAGLRRTMEKCTSSCRLILCCNNPSKVIDPLRSRCLGIRVAAPTEAEIVAVLDDVAARERLD-LPPALAARIAKASKRNLRRAILSLEECKVQQYPFDAAQAVPLPDWEQYVVAIASDIAREQSPQRLLATRDKLYELLSKCIPADVILKTLARELLKNLDDEMKAEVLKWAAFYEHRITQGNKEIFHLEAFVAKFMCLYKKFMMEMFA 353
BLAST of EWM26298.1 vs. NCBI_GenBank
Match: gi|298714917|emb|CBJ27673.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 471.47 bits (1212), Expect = 5.415e-164 Identity = 221/361 (61.22%), Postives = 287/361 (79.50%), Query Frame = 0 Query: 1 MLWVDKHRPTTLAKMDYHEDLTARLEALSEDGEVPHLLFYGPPGAGKKTRIMALLRQVFGAGVEKTRLEHKTFKTPTKRTIELTILASAFHQEINAAEAGSGDRFVVQEVIKEIAQSYNPAAAMGQAGGR------AYKVVILTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGIRVAAPSHESICAILNKVSKKESCGVLPEALAMRIAQTSGRNLRRALLMLEACRVQQHPFSAEQEVKVPDWEEYIAKLAVLLTEEQSPQRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVHWAAFYEHRVRIGSKEIFHLEAFVAKFMALYKAFVINTF 355 MLWVDKHRP +L +D H +LT RL A+SEDGE+PHLLFYGP G+GKKTR++ALL++++G G E+ RLEH++FKTP+ R +ELT +AS +H E++ +AG DR+VVQ++IKEIAQ+ + +A+MG G +KVV+L VDRL++QAQA LRRTME+YT++CRLIL C+S S+VIEPVRSRCLG+RV APS +C++L V +KES LP ALA R+A+ S RNLRRA+LM+EACRVQQ+PFS +QEV++ DWE YI +LA + EQSP+RL+ AR+ LYELLTNCIP+D+ILKTL REL+ LD +L EV WAAFYEHR+ +GSKEI HLEAFVAKFM++YKA++I F Sbjct: 1 MLWVDKHRPKSLDSLDVHPELTTRLAAMSEDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYVVQDIIKEIAQNRSISASMGGGGSDDKKSKIGHKVVVLVGVDRLTKQAQAGLRRTMERYTSSCRLILLCHSPSKVIEPVRSRCLGVRVPAPSESEVCSVLTSVCRKESL-TLPPALAARVAKVSKRNLRRAVLMIEACRVQQYPFSEDQEVQMTDWENYITQLAREVVLEQSPRRLLEAREKLYELLTNCIPADIILKTLTRELVKNLDCKLWGEVFKWAAFYEHRLHMGSKEILHLEAFVAKFMSIYKAYIIAEF 360
BLAST of EWM26298.1 vs. NCBI_GenBank
Match: gi|223998512|ref|XP_002288929.1| (replication factor C 37 KD subunit [Thalassiosira pseudonana CCMP1335] >gi|220976037|gb|EED94365.1| replication factor C 37 KD subunit [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 462.996 bits (1190), Expect = 1.164e-160 Identity = 223/362 (61.60%), Postives = 283/362 (78.18%), Query Frame = 0 Query: 1 MLWVDKHRPTTLAKMDYHEDLTARLEALSED-GEVPHLLFYGPPGAGKKTRIMALLRQVFGAGVEKTRLEHKTFKTPTKRTIELTILASAFHQEINAAEAGSGDRFVVQEVIKEIAQSYNPAAAMGQAGGRAYKVVILTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGIRVAAPSHESICAILNKVSKKESCGVLPEALAMRIAQTSGRNLRRALLMLEACRVQQHPFSAE-----QEVKVPDWEEYIAKLAVLLTEEQSPQRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVHWAAFYEHRVRIGSKEIFHLEAFVAKFMALYKAFVINTFG 356 MLWVDKHRPT L ++ YH LTARLE+LS D G +PHLLFYGPPG+GKKTRI ALLR VFG G E+ RL+ +TF TPT RT+E+ +++S +H E++ +AG DRFV+Q+VIKE+A S N A +G A YKVV+L EVD+L+RQAQAALRRTMEKY+++CRLILCCN+ S+VI+PVRSRCLGIRVAAPSH+ I +L V++KES LP+ LA+ +A++S RNLRRALLMLE+C V S + Q + DWE YI++LA +T EQSP+RL++AR+ LYELL NCIP+ ILKTL+ ELLP LDD +K EVV WAAFYEHR+ +GSKEIFHLEAF+AKFM++YK ++ + FG Sbjct: 1 MLWVDKHRPTRLTQLTYHGTLTARLESLSADPGGLPHLLFYGPPGSGKKTRIAALLRSVFGHGSERLRLDKRTFTTPTNRTVEINMISSNYHIEMSPGDAGLNDRFVIQDVIKEMASSKN-IATVGTANNE-YKVVVLVEVDKLTRQAQAALRRTMEKYSSSCRLILCCNNPSKVIDPVRSRCLGIRVAAPSHDEIATVLKTVARKESI-TLPDELAISLARSSNRNLRRALLMLESCHVTTRDDSPKELKPNQPIPHTDWERYISQLASEITREQSPKRLIMAREKLYELLINCIPAQTILKTLVMELLPTLDDSIKGEVVTWAAFYEHRIALGSKEIFHLEAFIAKFMSIYKRYINDMFG 359
BLAST of EWM26298.1 vs. NCBI_GenBank
Match: gi|675181949|ref|XP_008899859.1| (hypothetical protein PPTG_07433 [Phytophthora parasitica INRA-310] >gi|566031696|gb|ETI54607.1| hypothetical protein F443_02615 [Phytophthora parasitica P1569] >gi|568026984|gb|ETM00954.1| hypothetical protein L917_02398 [Phytophthora parasitica] >gi|568057464|gb|ETM54129.1| hypothetical protein L914_02492 [Phytophthora parasitica] >gi|568100584|gb|ETN15283.1| hypothetical protein PPTG_07433 [Phytophthora parasitica INRA-310] >gi|570335413|gb|ETO83361.1| hypothetical protein F444_02615 [Phytophthora parasitica P1976] >gi|570995574|gb|ETP52395.1| hypothetical protein F442_02591 [Phytophthora parasitica P10297] >gi|970635055|gb|KUF80072.1| Replication factor C subunit 3 [Phytophthora nicotianae] >gi|970659033|gb|KUF96724.1| Replication factor C subunit 3 [Phytophthora nicotianae]) HSP 1 Score: 445.662 bits (1145), Expect = 7.479e-154 Identity = 212/356 (59.55%), Postives = 273/356 (76.69%), Query Frame = 0 Query: 1 MLWVDKHRPTTLAKMDYHEDLTARLEALSEDGEVPHLLFYGPPGAGKKTRIMALLRQVFGAGVEKTRLEHKTFKTPTKRT-IELTILASAFHQEINAAEAGSGDRFVVQEVIKEIAQSYNPAAAMGQAGGRAYKVVILTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGIRVAAPSHESICAILNKVSKKESCGVLPEALAMRIAQTSGRNLRRALLMLEACRVQQHPFSAEQEVKVPDWEEYIAKLAVLLTEEQSPQRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVHWAAFYEHRVRIGSKEIFHLEAFVAKFMALYKAFVINTF 355 MLWVDK+RPT+L+ +D+H ++T RL LS+ ++PHLL YGP GAGKKTRIMALLR ++G G K RLEHK+FK P + T +E+T +AS FH E+N ++ G+ DR VVQEV+KEIAQ Y+ A Q R +KVV+L EVDRLS+ AQ ALRRTMEKYTA CRLILCCN+ S+VI+P+RSRCLG+RV AP+ + IC IL V KKE L IA S RNLRRALLMLE CRVQ +PFS +Q++++P WEEYI LA ++ +EQSP L+ AR+M+YEL++NC+PS+VILK L REL+ +LDD LKHE+V WA++YEHR++ GSK+IFH EAF+AKFM LYK F++ + Sbjct: 1 MLWVDKYRPTSLSSLDFHPEVTKRLSNLSQSSDLPHLLVYGPSGAGKKTRIMALLRALYGDGALKVRLEHKSFKAPNRSTKVEITTVASNFHIEMNPSDVGNNDRLVVQEVLKEIAQ-YHLADTNSQ---RPFKVVLLMEVDRLSKNAQHALRRTMEKYTATCRLILCCNNPSKVIDPLRSRCLGVRVGAPTMDDICTILQGVCKKEGLDYC-APLGKEIALKSERNLRRALLMLETCRVQSYPFSPDQQIQLPAWEEYICSLAKVVLQEQSPAGLLKAREMIYELISNCVPSEVILKVLCRELMSRLDDDLKHELVQWASYYEHRMQRGSKDIFHFEAFLAKFMTLYKKFLLELY 351
BLAST of EWM26298.1 vs. NCBI_GenBank
Match: gi|567969375|gb|ETK94467.1| (hypothetical protein L915_02498 [Phytophthora parasitica] >gi|567997765|gb|ETL47844.1| hypothetical protein L916_02469 [Phytophthora parasitica] >gi|570959462|gb|ETP24441.1| hypothetical protein F441_02573 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 442.965 bits (1138), Expect = 7.113e-153 Identity = 211/356 (59.27%), Postives = 273/356 (76.69%), Query Frame = 0 Query: 1 MLWVDKHRPTTLAKMDYHEDLTARLEALSEDGEVPHLLFYGPPGAGKKTRIMALLRQVFGAGVEKTRLEHKTFKTPTKRT-IELTILASAFHQEINAAEAGSGDRFVVQEVIKEIAQSYNPAAAMGQAGGRAYKVVILTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGIRVAAPSHESICAILNKVSKKESCGVLPEALAMRIAQTSGRNLRRALLMLEACRVQQHPFSAEQEVKVPDWEEYIAKLAVLLTEEQSPQRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVHWAAFYEHRVRIGSKEIFHLEAFVAKFMALYKAFVINTF 355 MLWVDK+RPT+L+ +D+H ++T RL LS+ ++PHLL YGP GAGKKTRIMALLR ++G G K RLEHK+FK P + T +E+T +AS FH E+N ++ G+ DR VVQEV+KEIAQ Y+ A Q R +KVV+L EVDRLS+ AQ ALRRTMEKYTA CRLILCCN+ S+VI+P+RSRCLG+RV AP+ + IC IL V KKE L IA S RNLRRALLMLE CRVQ +PFS +Q++++P WEE+I LA ++ +EQSP L+ AR+M+YEL++NC+PS+VILK L REL+ +LDD LKHE+V WA++YEHR++ GSK+IFH EAF+AKFM LYK F++ + Sbjct: 1 MLWVDKYRPTSLSSLDFHPEVTKRLSNLSQSSDLPHLLVYGPSGAGKKTRIMALLRALYGDGALKVRLEHKSFKAPNRSTKVEITTVASNFHIEMNPSDVGNNDRLVVQEVLKEIAQ-YHLADTNSQ---RPFKVVLLMEVDRLSKNAQHALRRTMEKYTATCRLILCCNNPSKVIDPLRSRCLGVRVGAPTMDDICTILQGVCKKEGLDYC-APLGKEIALKSERNLRRALLMLETCRVQSYPFSPDQQIQLPAWEEHICSLAKVVLQEQSPAGLLKAREMIYELISNCVPSEVILKVLCRELMSRLDDDLKHELVQWASYYEHRMQRGSKDIFHFEAFLAKFMTLYKKFLLELY 351
BLAST of EWM26298.1 vs. NCBI_GenBank
Match: gi|397643532|gb|EJK75924.1| (hypothetical protein THAOC_02338 [Thalassiosira oceanica]) HSP 1 Score: 442.965 bits (1138), Expect = 1.649e-152 Identity = 218/377 (57.82%), Postives = 282/377 (74.80%), Query Frame = 0 Query: 1 MLWVDKHRPTTLAKMDYHEDLTARLEALSED-GEVPHLLFYGPPGAGKKTRIMALLRQVFGAGVEKTRLEHKTFKTPTKRTIELTILASAFHQEINAAEAGSGDRFVVQEVIKEIAQSYNPAAAMGQAGGR---------------AYKVVILTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGIRVAAPSHESICAILNKVSKKESCGVLPEALAMRIAQTSGRNLRRALLMLEACRV---QQHPFSAEQEVKVP--DWEEYIAKLAVLLTEEQSPQRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVHWAAFYEHRVRIGSKEIFHLEAFVAKFMALYKAFVINTFG 356 ML+VDKHRP+ L++++YH+ LT RL +L+ D G +PHLL YGP GAGKKTR+MALLR+VFG G E+ RLE +TF TPTKR +E+ ++ S +H E+ +AG DR+V+Q+VIKE+A + N A+ + G +YKVV+L EVD+L+RQAQAALRRTMEKY+++CRLILCCN+ S+VI+PVRSRCLGIRVAAPS + I ++L VS+KE+ L + LA+ IA+ S RNLRRALLMLE+C V + P + + VP DWE YIA LA + +EQSP+ L+ AR+ LYELL NCIP+ +ILKTLL ELLP LDD +K EVVHWAAFYEHR+ +GSKEIFHLEAF+AKFMALYK ++ + FG Sbjct: 1 MLFVDKHRPSRLSQLNYHDTLTQRLTSLAADPGGLPHLLLYGPSGAGKKTRVMALLREVFGCGAERLRLEKRTFTTPTKRQVEINMIQSNYHIEMAPGDAGLNDRYVIQDVIKEMAANKNIASVVTSKDGNDGEDDGHAKKKAAKASYKVVVLVEVDKLTRQAQAALRRTMEKYSSSCRLILCCNNPSKVIDPVRSRCLGIRVAAPSDDEIASVLKTVSRKENIK-LADELAINIARLSSRNLRRALLMLESCYVTTRDESPRELKADTPVPRTDWERYIAMLATGIVKEQSPKSLMAAREKLYELLINCIPAQIILKTLLMELLPVLDDTIKAEVVHWAAFYEHRIALGSKEIFHLEAFIAKFMALYKKYLNDLFG 376
BLAST of EWM26298.1 vs. NCBI_GenBank
Match: gi|301092501|ref|XP_002997106.1| (replication factor C subunit 3 [Phytophthora infestans T30-4] >gi|262111642|gb|EEY69694.1| replication factor C subunit 3 [Phytophthora infestans T30-4]) HSP 1 Score: 441.81 bits (1135), Expect = 2.556e-152 Identity = 210/356 (58.99%), Postives = 271/356 (76.12%), Query Frame = 0 Query: 1 MLWVDKHRPTTLAKMDYHEDLTARLEALSEDGEVPHLLFYGPPGAGKKTRIMALLRQVFGAGVEKTRLEHKTFKTPTKRT-IELTILASAFHQEINAAEAGSGDRFVVQEVIKEIAQSYNPAAAMGQAGGRAYKVVILTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGIRVAAPSHESICAILNKVSKKESCGVLPEALAMRIAQTSGRNLRRALLMLEACRVQQHPFSAEQEVKVPDWEEYIAKLAVLLTEEQSPQRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVHWAAFYEHRVRIGSKEIFHLEAFVAKFMALYKAFVINTF 355 MLWVDK+RPT+L+ +D+H ++T RL LS+ ++PHLL YGP GAGKKTRIMALLR ++G G K RLEHK+FK P + T +E+T +AS FH E+N ++ G+ DR VVQEV+KEIAQ Y+ A R +KVV+L EVDRLS+ AQ ALRRTMEKYTA CRLILCCN+ S+VI+P+RSRCLG+RV AP+ + IC IL V KE L IA S RNLRRALLMLE CRVQ +PFS +Q++++P WEEYI LA ++ +EQSP L+ AR+M+YEL++NC+PS+VILK L REL+ +LDD LKHE+V WA++YEHR++ GSK+IFH EAF+AKFM LYK F++ + Sbjct: 1 MLWVDKYRPTSLSSLDFHPEVTKRLSNLSQSSDLPHLLVYGPSGAGKKTRIMALLRALYGDGALKVRLEHKSFKAPNRSTKVEITTVASNFHIEMNPSDVGNNDRLVVQEVLKEIAQ-YHLADTNAH---RPFKVVLLMEVDRLSKNAQHALRRTMEKYTATCRLILCCNNPSKVIDPLRSRCLGVRVGAPTTDDICTILQGVCSKEGLDYC-APLGKEIALKSERNLRRALLMLETCRVQNYPFSPDQQIQLPAWEEYICSLAKVVLQEQSPAGLLKAREMIYELISNCVPSEVILKVLCRELMSRLDDDLKHELVQWASYYEHRMQRGSKDIFHFEAFLAKFMTLYKKFLLELY 351
BLAST of EWM26298.1 vs. NCBI_GenBank
Match: gi|813157861|ref|XP_012202279.1| (hypothetical protein SPRG_07604 [Saprolegnia parasitica CBS 223.65] >gi|641532883|gb|KDO26890.1| hypothetical protein SPRG_07604 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 440.269 bits (1131), Expect = 1.014e-151 Identity = 212/356 (59.55%), Postives = 274/356 (76.97%), Query Frame = 0 Query: 1 MLWVDKHRPTTLAKMDYHEDLTARLEALSEDGEVPHLLFYGPPGAGKKTRIMALLRQVFGAGVEKTRLEHKTFKTPTK-RTIELTILASAFHQEINAAEAGSGDRFVVQEVIKEIAQSYNPAAAMGQAGGRAYKVVILTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGIRVAAPSHESICAILNKVSKKESCGVLPEALAMRIAQTSGRNLRRALLMLEACRVQQHPFSAEQEVKVPDWEEYIAKLAVLLTEEQSPQRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVHWAAFYEHRVRIGSKEIFHLEAFVAKFMALYKAFVINTF 355 MLWVD HRPT+L ++D+H ++ RL+ L+ E+PHLL YGP GAGKKTR+MALL++++G KTRLEHKTFK PT+ + +E+T +AS +H E+N ++ G+ DR VVQEVIKEIA Y A Q + +KVV+L EVD+LS+ AQ ALRRTMEKYT +CRLILCCNS S+VI+P+RSRCLGIR+ AP+H+ I ++L KV KE+ LAM IA+ S RNLRRALLMLE CRVQ +PF A+Q + +P+WEEYIA LA + +EQSP L+ ARD LYELL+NCIPSD+ILK LLREL +LDD LKHE+ H+AA+YEHR++ G K IFHLEAF+AKFM +YK F+++ + Sbjct: 1 MLWVDAHRPTSLDRLDFHAPISDRLKRLAASEELPHLLIYGPSGAGKKTRVMALLKELYGPNALKTRLEHKTFKHPTQSKKVEITTVASNYHIEMNPSDVGNDDRLVVQEVIKEIAM-YRLADTNAQ---KQFKVVVLVEVDQLSKAAQHALRRTMEKYTGSCRLILCCNSPSKVIDPLRSRCLGIRIGAPTHDEIVSVLQKVCVKENLSFC-APLAMEIAKKSERNLRRALLMLETCRVQNYPFMADQPIPLPEWEEYIAGLAKDVLQEQSPGSLLKARDKLYELLSNCIPSDIILKVLLRELTCRLDDDLKHELAHYAAYYEHRLQCGQKAIFHLEAFLAKFMTIYKKFLLDFY 351
BLAST of EWM26298.1 vs. NCBI_GenBank
Match: gi|953491834|emb|CEG45843.1| (replication factor c subunit 3 [Plasmopara halstedii]) HSP 1 Score: 439.113 bits (1128), Expect = 2.276e-151 Identity = 209/356 (58.71%), Postives = 272/356 (76.40%), Query Frame = 0 Query: 1 MLWVDKHRPTTLAKMDYHEDLTARLEALSEDGEVPHLLFYGPPGAGKKTRIMALLRQVFGAGVEKTRLEHKTFKTPTKRT-IELTILASAFHQEINAAEAGSGDRFVVQEVIKEIAQSYNPAAAMGQAGGRAYKVVILTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGIRVAAPSHESICAILNKVSKKESCGVLPEALAMRIAQTSGRNLRRALLMLEACRVQQHPFSAEQEVKVPDWEEYIAKLAVLLTEEQSPQRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVHWAAFYEHRVRIGSKEIFHLEAFVAKFMALYKAFVINTF 355 MLWVDK+RPT+L+++DYH ++ RL LS ++PHLL YGP GAGKKTRIMALLR ++G G K RLEHK+FK P + T +E+T +AS FH E+N ++ G+ DR VVQEV+KEIAQ Y+ A Q R +K+V+L EVDRLS+ AQ ALRRTMEKYTA CRLILCC + S+VI+P+RSRCLG+RV AP+ + IC IL+ V KE L IA S RNLRRALLMLE CRVQ +PFS +Q++++P WEEYI LA ++ +EQSP L+ AR+M+YEL++NC+PS+VILK L REL+ +LDD LKHE+V WA++YEHR++ GSK+IFH EAF+AKFM LYK F+++ + Sbjct: 1 MLWVDKYRPTSLSELDYHPEVAKRLSNLSRCSDLPHLLVYGPSGAGKKTRIMALLRALYGDGALKVRLEHKSFKVPNRSTKVEITTVASNFHIEMNPSDVGNSDRLVVQEVLKEIAQ-YHLADTNAQ---RPFKIVLLMEVDRLSKNAQHALRRTMEKYTATCRLILCCTNPSKVIDPLRSRCLGVRVGAPTTDDICNILHNVCTKEGLDYC-APLGKEIALKSERNLRRALLMLETCRVQNYPFSPDQQIQLPAWEEYICSLAKVVLQEQSPAGLLKAREMIYELISNCVPSEVILKVLCRELMSRLDDDLKHELVQWASYYEHRMQRGSKDIFHFEAFLAKFMTLYKKFLLDLY 351 The following BLAST results are available for this feature:
BLAST of EWM26298.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|