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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100003g44.1721.mrna |
| Orig protein id | gnl|cribi|Naga_100003g44.1721 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1083104..1084545 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna438 ID=rna438|Name=rna438|organism=Nannochloropsis gaditana|type=mRNA|length=1533bp
ATGGAGGCTGTTGTGGCAAGAGGAGCGCAAGGAAATGATCCGCTGGCGCG
GGACAAGAATGAGAAGGGACGGGCCGCCGCCAAGGGAGGAGCTCAAGCAA
TCGCAAAGGCGTACAAGCGCGGTCTGCCAACACCAAGTCCTCTGCGGCGA
ATGGAGGATCCGTGTGCGGACCACATTATGCCCTCCCGGAGCGAGAAGAA
GAGCAAAACTCAGAATTCTCTCATGCTACCGCCAGCAGTTCCCCCGTCCC
GCAGGCGGCGCAAGAGTCCTCAGGTGCTAGACGAGGACTCCTTTGTGGAT
GCCATGGGGGAGATCATAGAACGAGATTTCTTCCCCGAACTACCCAAGCT
ACACCGGCAGATGAAGTGGCTGCAAGCCCTTGAAAGCCGTCAGTTGCGAA
GTCTGGCAGAGGTGCAGCGTCTGGTGCTGTCTGGCGGCTCTCTGGAACAG
ATTGTCTCCAGAGCAGATACCGGCGCCGGGCTGGGTGACAGTGGCCATGG
GTTGGGATCTGAGACCCCTCTATCGACAGCTGCGTCATCAGACGCCCCAA
CCTTACCGCCATTGCCTTTGACTCTGGACCAGTTTTTGGCCCGTTTCCAC
AGCGAGGACGACGCGGCCTTTGACGACCTGGCGGAACGCATGCGGGAGGC
GCACCGTCGGAAGTACTGGTGGGTGTACGCCCACCCACAGCTGGAAACAG
GAAAGGAGAAACTGTACCTGCTGCCCAACGGGGAGATGATGACCGAGGAA
GAACAGAGACGGCACGTAGAGGCGGCCAACGCCAAGCCCCGGCTCGGGGA
TGACCGGCCGAATGCCCCTGAGACTTGGCCTATACGGGCGAAGAACGCCT
TGATGTTCGGACCGGGGTCCCTGGAAGAGAACGCGCGGGTCCACGAGCGA
GGACGCGACGGAGCCACGCAGCCGGCCTTGCTGCTGGAGGACGACGAGGC
GAATGGAACGAGGCCCCTGCTCCTGGCGGGGAACGGGGGCAACGCGCGCG
TGGGCCTGGCAGCCAAGGCACCGAAACGACTAGTGCACAGTAACACACGC
TTTCATGCGGGCAGCTTGTCATGGAAAGGGAGGGATCCGTCGCGAGCCTT
GCCCTTGGAGCGCCCGCGCTCTGACGCGAGCAGCTCCTCGGCCGCCACGT
CGGCGTCTGCGGCGCAGCGGGAGGTGACGGAGGGTTTTGTGCCCATGACC
CCGCTCCTCGTCCCAGGGGCAGAGGGTGACGTGCCTATCATGACCTGGGG
GGAGGTGGAGAGCACGCCCTTGCGGGTGGCAGAGCCCTTTGATTACGGGA
GCCCCGTGGTCCCGGTGGAAAGCCGGGGCGATGCCTTGGGGTCGAGGCAA
GGCTTTCACATCCAACCCACCGGGTCGCGGGAGAGGGTAGCGAACGCCCT
GGAGTCCCAACGGGGGCAGACGGGGGGGACTGGTTCTAGAGGTACCGCCT
CCGGGTCCTGGTCCACTCCGTCCTTGGAGGAGGGCAGCAGCCGGACCGGG
AGCAAGGTGACGGAGAACCTGCTGAACATATGA back to topprotein sequence of rna438 >rna438-protein ID=rna438-protein|Name=rna438|organism=Nannochloropsis gaditana|type=polypeptide|length=257bp
MVLAPSLLYLSRAPFTLSTLVALTYLFFPRFGMWQIDSLRYSSMTISPWD
LAISLEMDVGVSMFNPNHINSRLHNATLDIYRVQPTHISGAHQAPTYGTS
FGVARTHFHEVPRRDTFYLDSHVSIVRLPFAVLCSFMRELLLNKGVVKMR
GVGQAWISAAAQDVTVLVDCFQHVQPFPHPGRIVHTACNFKLANGGGMNG
SLLDLLQLQLGTEWGEIRGRKKQQGHKARKSVRAKEEICDATMIRGVIAE
VQACEGL back to topmRNA from alignment at CM002455.1:1083104..1084545+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna438 ID=rna438|Name=rna438|organism=Nannochloropsis gaditana|type=mRNA|length=1442bp|location=Sequence derived from alignment at CM002455.1:1083104..1084545+ (Nannochloropsis gaditana)
CAATTTTGCCATTGAAATGATCAAAACGCGCACATTCACTGTATCATACG
CATTTTTCCCATGTCCTCTACCCTTTTCAGAGACCTCCGCCGGCTTTTTG
GTCTTGCTGGCAGCTTTCATGAGACGATGTGCAGTCCTTGCTAGTAGTGA
CCGAATTTTAGGCTAGAACTTCCCGATCTGCATGCGTCTAAACGGGCACA
CAACTACTCGACCGTCTCCTACCTCGCCGTGACATTCAAATACCATTCTG
TCAACGCAAGTTCAAAGTCTTGTTCGAAGGGGTAGTCTAGTTCTACTCCG
ACTTCGGGGAGGCGCGGAGCCGAATCTGCTGTGAATCCGTCACTCACGCT
TCTGTGATGGTCCTCGCACCTTCACTCCTTTACCTCTCTCGAGCGCCCTT
CACGCTTTCCACCCTCGTCGCCTTGACCTACTTATTTTTCCCGCGGTTTG
GCATGTGGCAAATCGATTCGTTGCGGTATTCCTCCATGACCATCTCCCCT
TGGGACCTCGCCATCTCCTTGGAAATGGATGTAGGGGTGTCTATGTTCAA
CCCTAACCACATCAACTCACGTTTACACAACGCAACACTGGATATCTATC
GCGTCCAACCCACGCATATCAGTGGGGCACACCAGGCGCCGACCTACGGA
ACAAGCTTCGGGGTAGCCCGAACGCATTTTCACGAAGTCCCCAGACGGGA
TACTTTTTATTTGGATAGCCACGTTTCTATTGTTCGTCTCCCTTTCGCTG
TGCTCTGCTCCTTCATGAGAGAACTGCTCCTGAACAAGGGCGTGGTCAAA
AtgaggggggtggggcaggCCTGGATCTCGGCAGCGGCGCAAGACGTGAC
AGTGTTGGTCGACTGCTTCCAGCATGTGCAGCCTTTTCCGCATCCGGGTC
GCATTGTGCATACTGCTTGTAATTTTAAGCTGGCTAATGGCGGGGGTATG
AATGGATCACTGCTGGATTTACTCCAGCTGCAGTTGGGAACCGAGTGGGG
GGAGATCCGTGGGCGcaagaagcagcagggaCACAAGGCGCGGAAGAGCG
TACgtgcgaaggaagagatTTGTGACGCCACCATGATTAGAGGGGTAATC
GCAGAAGTACAGGCGTGCGAAGGATTGTGACCAAGGATCAGGCGGGAGCA
CAATTTTTGGAGGGATCATGTTTTTAATAGGGAGAACGGCTACTTGTTCA
TGCCATTGCATTTTCGGAATGTAACATTTTGACCGTCTTGGAAAGCAGTG
GATTTTAACCATTTTTGACTGAAGTCGACAGGAATCTtttgggtggggag
gagccaGTTTTATATCTCTAGCCAACACTGTGTATGGCAGCCAGTATTCT
ACTTGGTATGCAATGTATTTTGGCTTCTTTTCAGCTAACATAGTAGAGTC
CGCCGGGAAAAGCTCCAAAGAAATGTAACTGCAATCTTCTGT back to topCoding sequence (CDS) from alignment at CM002455.1:1083104..1084545+ >rna438 ID=rna438|Name=rna438|organism=Nannochloropsis gaditana|type=CDS|length=774bp|location=Sequence derived from alignment at CM002455.1:1083104..1084545+ (Nannochloropsis gaditana)
ATGGTCCTCGCACCTTCACTCCTTTACCTCTCTCGAGCGCCCTTCACGCT
TTCCACCCTCGTCGCCTTGACCTACTTATTTTTCCCGCGGTTTGGCATGT
GGCAAATCGATTCGTTGCGGTATTCCTCCATGACCATCTCCCCTTGGGAC
CTCGCCATCTCCTTGGAAATGGATGTAGGGGTGTCTATGTTCAACCCTAA
CCACATCAACTCACGTTTACACAACGCAACACTGGATATCTATCGCGTCC
AACCCACGCATATCAGTGGGGCACACCAGGCGCCGACCTACGGAACAAGC
TTCGGGGTAGCCCGAACGCATTTTCACGAAGTCCCCAGACGGGATACTTT
TTATTTGGATAGCCACGTTTCTATTGTTCGTCTCCCTTTCGCTGTGCTCT
GCTCCTTCATGAGAGAACTGCTCCTGAACAAGGGCGTGGTCAAAAtgagg
ggggtggggcaggCCTGGATCTCGGCAGCGGCGCAAGACGTGACAGTGTT
GGTCGACTGCTTCCAGCATGTGCAGCCTTTTCCGCATCCGGGTCGCATTG
TGCATACTGCTTGTAATTTTAAGCTGGCTAATGGCGGGGGTATGAATGGA
TCACTGCTGGATTTACTCCAGCTGCAGTTGGGAACCGAGTGGGGGGAGAT
CCGTGGGCGcaagaagcagcagggaCACAAGGCGCGGAAGAGCGTACgtg
cgaaggaagagatTTGTGACGCCACCATGATTAGAGGGGTAATCGCAGAA
GTACAGGCGTGCGAAGGATTGTGA back to top
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