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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100093g12.5112.mrna |
| Orig protein id | gnl|cribi|Naga_100093g12.5112 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:422796..424560 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4377 ID=rna4377|Name=rna4377|organism=Nannochloropsis gaditana|type=mRNA|length=2165bp
GCAATAAGCACTTTTTCGACCAAGCACCTCTGACAAGGACTTTTTCCATC
CGTCGACATGCGCACCGTCGATACACGAAGGTTTGTGATGGAAACCACCC
TTCGAGGGCTGTAAACCCTCTCAAGTCGCTCGTAAGGGCACGGTAAGGCC
GTCCATATATGTTAAGTCCATGAGCATGTGTTCCCTCGACGGAATTCCGA
AGAAGCTCGCTTTCTGGTTCGAGGCCCGAGCATGGTCCCCCCTTTTGAGC
GGAGTCTCAGCAAGCGGTAGCGCAATATGCACACACGCCTTGGGAGCGTT
GCGCATTTCATATGAGTTTATGATAGAGGGCTGGTCCATAAGACGCTGGG
ACTCATTTTTGTCCATCTGTTTCCAACAGCTGTCCGTTGCTTCTACTGCT
TCTAGGCGGGTAGACTAGTGCGAGCATGCCCCTGGAGACCACTATAATAT
GCGTGGATAACAGTGAATGGACACGCAACGGGGACTACATCCCGACACGT
TTTGAGGCGCAACACGACGCGGTCAACCTGGTGACGGGCGCCAAGACACA
GCAAAACCCGGAGAGCACCGTGGGGGTTCTGACCATGGCCGGGCGGGGTG
TCGAGCTCCTCGTTTCTCCCACGGACGACATTGGGAAGCTCCTGTCCTGC
CTTCATAGTGTCAGGATGGGAGGAAGGGTCGACATGGCGGGCGCGGTACA
AGTGGCGCAGCTGGCTTTAAAACACAGACGAAATAAGAACGGGAGCCAGC
GCGTGGTAGTCTTTGTCTGCAGCCCCGTGGAGGCCGACGCGAAGACATTG
GTCAAGGTGGGCAAGCAGCTTAAAAAGAATGGGATTGCTGTAGACGTGGT
GAGCCTGGGGGAGATCGAAGAGAACCAGGAGAAGCTGCAGGAGTTCGTGG
AGGCGACCAATAGCAACAGCAACTCCCACCTGGTTTCCATCCCGGCGGGT
TTCCTCCCGTCCGACGTTCTTGTCACCTCCCCTATCATCCACGGCGGGGA
AGAAGGCAGCGAGGGCGCTGGGATGGGTGCAGGTGCGGGGGGAGGCGGGG
CGGGTTTCGGTGGAACTTCGGGACTCGGAGACTTTGGAGGCGTGGACGCG
CAGAGCGATCCGGCCTTGGCCATGGCCCTGCGAGTCTCCTACGAAGAGGA
GCGGGCGCGGCAGGAGGCGGCAGCAAAGGCGGCGGCGGCGACAGAGGGGG
AAAACGAGGGGGAGGCGAAGGGAATGGCGATGGAGACCGAGGCAGGCGCG
TCGTCCTCGGGAACCGCCGCCGCCGCCGCTGCGTCCATGGGCGGGGAAGT
GGACGAGGAGGAGGAGGCCTTGTTGAAGCAGGCGCTTGCCATGTCGATGG
CAGACTCGGGAAGCAGCTCCAGTCTGGAGAATAAGGGGAAGACGGCTGCG
AGTGGCACCGGGAGCGGAGAGACTGCCGGGGCAGGACAAGGGGAAGGGGC
CCCGATGGATATGGAGGATGAAGATGCCGCGTACCAACTCGCCTTGAAGA
TGTCCATGGAGGAAGAGGGAGGAGGCGCCGGGGGGGGGATCTACGGGTGC
GACCACGGGCACGGAAGCAGGGGGAGAAGCATCGTCGGCTGCCCCCGCAG
CGCCCACATTCGCGGATCCGGAGTTTGTGATGAACCTGCTGGGCTCGTTG
GAAGGAGTCGATCCTAACGACCCCACCATCCGCGCCACCCTGGAGTCGAT
GGGGATCAAGCCGCCGGGAACTGAGGAGAGGAAGGATGGAGAAGGCGGAG
GGGGCTCGAAGTGAAGGGTGGAGGGGGAAAGGGTCTGATGAAGAGTGGGA
CACTGTGTAAAAACCCACGGGGCCTAGAGAAGAGAGGAGTCGGGCGACCG
AGTCTTTGACAGGCAACTTTCAGGAGATAGAGTCCCATGGCTTACAAGGG
TAGAGGCGTATCAGCGGGGAGATGTACAACAATTGTGTACGTTCCAAAGC
GTAGTGCTCATAATGGAAAAAGACCAGCGTGACGGAGCGAGGGATGAGTC
AAATTAAAAGGCCCATTGTAGATTGCTTTTCCTTTCCGTAGCCATTGATG
CCACGTCCCAGGCAGGGTCCTTACATGACGAGCCAAGGCTTGACACCTTC
TGAAACTGAAAGTCTCAATTAAATGCCGGGCATGAGGAAAAAACAAATTT
GATATCAGAGTGATA back to topprotein sequence of rna4377 >rna4377-protein ID=rna4377-protein|Name=rna4377|organism=Nannochloropsis gaditana|type=polypeptide|length=451bp
MTSMEESGSASSYFAETAPSPERPACTFPTTSPSSVPRLCSQLGTMDFPV
SVSNLCVEEGPARTASRRLSRQSLESTMDELNEVSKGIPDAEVKECLPEP
ENSLRRPFWQLLLIQRTITSGGFLNPKLYVPRLAWEQYGARVNGLSTKMT
AFEAVLSLLLGCPLPVQLLLNAPGSGVGKNNMPAPAKALGTLGLEEVDDQ
RVREDLLKAQKALQAFRELRAEFDVVQNSLARSFPFLRPVASEDSGARRE
GIGRRGRSSSRPGDSSSPVPSFGDAFSLAMSAGGGMQHIRGLMASFGRKI
HKGAVSAMTAYERMGVLAAKISDAELQSYSALVCEVCEKAQRLDGWFLYL
DDSRRMLEKFLSRHVSSCSSPQAPAASSFSSSSLSLMETLRALQHCVENS
LVELLHCARFLQDVVVELVLRDVESLLDSYLRRARKVFSRMVWELEDSEA
P back to topmRNA from alignment at CM002463.1:422796..424560+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4377 ID=rna4377|Name=rna4377|organism=Nannochloropsis gaditana|type=mRNA|length=1765bp|location=Sequence derived from alignment at CM002463.1:422796..424560+ (Nannochloropsis gaditana)
ATTTGAACGGCAAGGTCTAAAATATCAATTCTAAACATCACCTCGGCTTT
GCTACAAGTCTGACTGCTTGACTGAAGGAGGCGCATGTCAGGGTCAAATC
TGACCACGCAGCTAGCTTGTGGTCGTGATAGCAATCAAGTAAAGACCTCG
TGGAGAGTACCGTCCGAGGAGAACACGTACGCGTCTCATTAATCCGCACA
ATTCGAAGCCACCATTCTCACCGAATACACGTAAATAATTTCAATGCACA
CACCTCATTAATTGGAAGCTTACATCGTTCAGGAGGACGCCATGACCTcg
atggaggaaagcgggagcgCGAGCAGTTACTTTGCGGAGacggccccctc
tcctgAGAGGCCCGCCTGCACCTTTCCCACGACAAGCCCCTCCTCAGTAC
CGCGCCTTTGCAGTCAATTGGGCACGATGGACTTCCCTGTTTCAGTTTCC
AATCTTTgcgtggaagaagggccTGCACGGACGGCGTCCCGAAGGTTGTC
GAGGCAGTCTTTGGAGAGCACCATGGACGAGCTCAACGAGGTCAGCAAAG
GGATACCAGACGCCGAAGTCAAGGAATGTCTGCCGGAACCGGAGAATTCG
CTGAGAAGGCCGTTTTGGCAGCTCCTGCTCATACAACGGACAATTACGTC
CGGAGGCTTTCTAAACCCCAAATTGTACGTGCCACGGTTGGCGTGGGAGC
AGTATGGGGCGCGCGTGAACGGTCTCAGCACGAAGATGACCGCGTTCGAG
GCCGTGCTCAGCCTTCTTTTGGGCTGTCCTTTGCCGGTACAATTACTCCT
GAATGCACCTGGCTCTGGGGTTGGGAAGAATAACATGCCTGCGCCCGCCA
AGGCTCTAGGAACTCTAGGTCTTGAGGAAGTCGATGACCAACGTGTAAGG
GAGGACCTGCTCAAAGCGCAAAAGGCTTTGCAAGCCTTTCGAGAGCTTCG
AGCTGAGTTTGATGTCGTACAAAACTCGTTGGCACGGTCGTTTCCATTTC
TCAGGCCTGTCGCTTCTGAGGACAGTGGCGCGCGGAGAGAGGGTATCGGC
CGACGCGGTCGGAGCAGCAGTAGGCCTGGAGACAGTAGCTCCCcggttcc
ctccttcggcgaTGCCTTCTCTCTCGCCATGTCGGCCGGCGGAGGTATGC
AACATATACGAGGATTGATGGCGTCGTTTGGGAGAAAGATTCATAAGGGT
GCCGTTTCCGCGATGACGGCGTACGAGCGGATGGGGGTGTTGGCTGCGAA
AATTAGTGACGCAGAGCTCCAGTCCTACTCGGCACTGGTATGCGAAGTTT
GCGAGAAAGCGCAGAGGCTGGACGGATGGTTCCTGTATTTGGACGACAGC
CGAAGGATGTTGGAGAAGTTTTTGAGCCGACACGTCTCGTCATGCTCCTC
GCCTCAAGCCCCAgccgcatcctccttctcttcctcctctctatCTCTCA
TGGAAACCCTCCGAGCTTTGCAACACTGTGTGGAAAATAGTTTGGTCGAG
CTCCTGCATTGCGCCCGCTTTCTGCAGGATGTGGTGGTGGAGCTGGTCCT
TCGGGACGTCGAGTCGCTGCTGGACTCTTACCTCCGGAGGGCGCGCAAGG
TTTTCTCGAGAATGGTttgggagctggaggactCGGAGGCACCCTAGCCG
TGAGCGAGGAAGTCAGAAGTAAAAAtcaaggaagggggctcCGTCAGCCA
AGGAGGTTTTTAATTGGGGCTCTGGTCGTGGCTGCGGTCAGCATAAATAT
GTTGATAGTTATATT back to topCoding sequence (CDS) from alignment at CM002463.1:422796..424560+ >rna4377 ID=rna4377|Name=rna4377|organism=Nannochloropsis gaditana|type=CDS|length=1356bp|location=Sequence derived from alignment at CM002463.1:422796..424560+ (Nannochloropsis gaditana)
ATGACCTcgatggaggaaagcgggagcgCGAGCAGTTACTTTGCGGAGac
ggccccctctcctgAGAGGCCCGCCTGCACCTTTCCCACGACAAGCCCCT
CCTCAGTACCGCGCCTTTGCAGTCAATTGGGCACGATGGACTTCCCTGTT
TCAGTTTCCAATCTTTgcgtggaagaagggccTGCACGGACGGCGTCCCG
AAGGTTGTCGAGGCAGTCTTTGGAGAGCACCATGGACGAGCTCAACGAGG
TCAGCAAAGGGATACCAGACGCCGAAGTCAAGGAATGTCTGCCGGAACCG
GAGAATTCGCTGAGAAGGCCGTTTTGGCAGCTCCTGCTCATACAACGGAC
AATTACGTCCGGAGGCTTTCTAAACCCCAAATTGTACGTGCCACGGTTGG
CGTGGGAGCAGTATGGGGCGCGCGTGAACGGTCTCAGCACGAAGATGACC
GCGTTCGAGGCCGTGCTCAGCCTTCTTTTGGGCTGTCCTTTGCCGGTACA
ATTACTCCTGAATGCACCTGGCTCTGGGGTTGGGAAGAATAACATGCCTG
CGCCCGCCAAGGCTCTAGGAACTCTAGGTCTTGAGGAAGTCGATGACCAA
CGTGTAAGGGAGGACCTGCTCAAAGCGCAAAAGGCTTTGCAAGCCTTTCG
AGAGCTTCGAGCTGAGTTTGATGTCGTACAAAACTCGTTGGCACGGTCGT
TTCCATTTCTCAGGCCTGTCGCTTCTGAGGACAGTGGCGCGCGGAGAGAG
GGTATCGGCCGACGCGGTCGGAGCAGCAGTAGGCCTGGAGACAGTAGCTC
CCcggttccctccttcggcgaTGCCTTCTCTCTCGCCATGTCGGCCGGCG
GAGGTATGCAACATATACGAGGATTGATGGCGTCGTTTGGGAGAAAGATT
CATAAGGGTGCCGTTTCCGCGATGACGGCGTACGAGCGGATGGGGGTGTT
GGCTGCGAAAATTAGTGACGCAGAGCTCCAGTCCTACTCGGCACTGGTAT
GCGAAGTTTGCGAGAAAGCGCAGAGGCTGGACGGATGGTTCCTGTATTTG
GACGACAGCCGAAGGATGTTGGAGAAGTTTTTGAGCCGACACGTCTCGTC
ATGCTCCTCGCCTCAAGCCCCAgccgcatcctccttctcttcctcctctc
tatCTCTCATGGAAACCCTCCGAGCTTTGCAACACTGTGTGGAAAATAGT
TTGGTCGAGCTCCTGCATTGCGCCCGCTTTCTGCAGGATGTGGTGGTGGA
GCTGGTCCTTCGGGACGTCGAGTCGCTGCTGGACTCTTACCTCCGGAGGG
CGCGCAAGGTTTTCTCGAGAATGGTttgggagctggaggactCGGAGGCA
CCCTAG back to top
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