EWM26315.1, cds4367 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM26315.1 vs. NCBI_GenBank
Match: gi|585108321|gb|EWM26315.1| (hypothetical protein Naga_100093g12 [Nannochloropsis gaditana]) HSP 1 Score: 912.909 bits (2358), Expect = 0.000e+0 Identity = 451/451 (100.00%), Postives = 451/451 (100.00%), Query Frame = 0 Query: 1 MTSMEESGSASSYFAETAPSPERPACTFPTTSPSSVPRLCSQLGTMDFPVSVSNLCVEEGPARTASRRLSRQSLESTMDELNEVSKGIPDAEVKECLPEPENSLRRPFWQLLLIQRTITSGGFLNPKLYVPRLAWEQYGARVNGLSTKMTAFEAVLSLLLGCPLPVQLLLNAPGSGVGKNNMPAPAKALGTLGLEEVDDQRVREDLLKAQKALQAFRELRAEFDVVQNSLARSFPFLRPVASEDSGARREGIGRRGRSSSRPGDSSSPVPSFGDAFSLAMSAGGGMQHIRGLMASFGRKIHKGAVSAMTAYERMGVLAAKISDAELQSYSALVCEVCEKAQRLDGWFLYLDDSRRMLEKFLSRHVSSCSSPQAPAASSFSSSSLSLMETLRALQHCVENSLVELLHCARFLQDVVVELVLRDVESLLDSYLRRARKVFSRMVWELEDSEAP 451 MTSMEESGSASSYFAETAPSPERPACTFPTTSPSSVPRLCSQLGTMDFPVSVSNLCVEEGPARTASRRLSRQSLESTMDELNEVSKGIPDAEVKECLPEPENSLRRPFWQLLLIQRTITSGGFLNPKLYVPRLAWEQYGARVNGLSTKMTAFEAVLSLLLGCPLPVQLLLNAPGSGVGKNNMPAPAKALGTLGLEEVDDQRVREDLLKAQKALQAFRELRAEFDVVQNSLARSFPFLRPVASEDSGARREGIGRRGRSSSRPGDSSSPVPSFGDAFSLAMSAGGGMQHIRGLMASFGRKIHKGAVSAMTAYERMGVLAAKISDAELQSYSALVCEVCEKAQRLDGWFLYLDDSRRMLEKFLSRHVSSCSSPQAPAASSFSSSSLSLMETLRALQHCVENSLVELLHCARFLQDVVVELVLRDVESLLDSYLRRARKVFSRMVWELEDSEAP Sbjct: 1 MTSMEESGSASSYFAETAPSPERPACTFPTTSPSSVPRLCSQLGTMDFPVSVSNLCVEEGPARTASRRLSRQSLESTMDELNEVSKGIPDAEVKECLPEPENSLRRPFWQLLLIQRTITSGGFLNPKLYVPRLAWEQYGARVNGLSTKMTAFEAVLSLLLGCPLPVQLLLNAPGSGVGKNNMPAPAKALGTLGLEEVDDQRVREDLLKAQKALQAFRELRAEFDVVQNSLARSFPFLRPVASEDSGARREGIGRRGRSSSRPGDSSSPVPSFGDAFSLAMSAGGGMQHIRGLMASFGRKIHKGAVSAMTAYERMGVLAAKISDAELQSYSALVCEVCEKAQRLDGWFLYLDDSRRMLEKFLSRHVSSCSSPQAPAASSFSSSSLSLMETLRALQHCVENSLVELLHCARFLQDVVVELVLRDVESLLDSYLRRARKVFSRMVWELEDSEAP 451
BLAST of EWM26315.1 vs. NCBI_GenBank
Match: gi|298712833|emb|CBJ48798.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 86.6557 bits (213), Expect = 3.810e-15 Identity = 68/266 (25.56%), Postives = 105/266 (39.47%), Query Frame = 0 Query: 90 DAEVKECLPEPENSLRRPFWQLLLIQRTITSGGFLNPKLYVPRLAWEQYGARVNGLSTKMTAFEAVLSLLLGCPLPVQLLLNAPGSGVGKNNMPAPAKALGTLGLEEVDDQRVREDLLKAQKALQAFRELRAEFDVVQNSLARSFPFLRPVASEDSGARREGIGRRGRSSSRPGDSSSPVPSFGDAFSLAMSAG--GGMQHIRGLMASFGRKIHKGAVSAMTAYERMGV-LAAKISDAELQSYSALVCEVCEKAQRLDGWFLYLDD 352 DA EP + RR +W L L++ TI GG L PKLY P+ W Q G +V+G + ++ A E+VL +++ ++P P VD + +E A + R R + +Q L+R FP++ V D LA G + + +M + GR + SA+ A ER+G + K D L Y +V E+C + Q D WF++L D Sbjct: 100 DANQSTLEAEPTHPARRSYWVLRLVRTTILYGGHLTPKLYAPKEVWTQVGVKVSGFAPRIAALESVLYMVIDQV----------------KDLPKP-----------VDAEARKE-------AAEVMRTFRQQAHKLQTDLSRHFPYVVQV---------------------------------DPLGLAKELGPKSNLGRLNSVMKNIGRNVKH---SAVVAVERIGAGINGKHVDDGLAYYKQVVSELCSECQVFDSWFVHLQD 295
BLAST of EWM26315.1 vs. NCBI_GenBank
Match: gi|552939903|gb|ESA22972.1| (hypothetical protein GLOINDRAFT_109812 [Rhizophagus irregularis DAOM 181602] >gi|595483323|gb|EXX70740.1| hypothetical protein RirG_084710 [Rhizophagus irregularis DAOM 197198w]) HSP 1 Score: 72.0182 bits (175), Expect = 1.028e-9 Identity = 75/350 (21.43%), Postives = 131/350 (37.43%), Query Frame = 0 Query: 87 GIPDAEVKECLPEPENS-LR-RPFWQLLLIQRTITSGGFLNPKLYVPRLAWEQYGARVNGLSTKMTAFEAVLSLLLGCPLPVQLLLNAPGSGVGKNNMPAPAKALGTLGLEEVDDQRVREDLLKAQKALQAFRELRAEFDVVQNSLARSFPFLRPVASEDSGARREGIGRRGRSSSRPGDSSSPVPSFGDAFSLAMSAGGGMQHIRGLMASFGRKIHKGAVSAMTAYERMGVLAAKISDAELQSYSALVCEVCEKAQRLDGWFLYLDDSRRMLEKFLSRHVSSCSSPQAPAASSFSSSSLSLMETLRALQHCVENSLVELLHCARFLQDVVVELVLRDVESLLDSYLRRA 434 G+P LPEP S +R +PFW + L++RT+T+GG+L PKL++P+ W Q ++ + TKM++ E V + L + L + ++D K KAL+ + + +QNSLAR ++ G R+ SS + S+G K+ +G +RMG+ A + E Y ++ +V + A +++E ++ ++ S +P H + +V L A FL +V+ V+RD+ L D YL++ Sbjct: 607 GLPHISSNNGLPEPPPSDIRLKPFWLMRLLERTMTTGGYLTPKLFIPQYLWLQGHVKLTAIDTKMSSCEVVSNCL---------------------------EKLEKISFSDLD---------KLSKALEGVDPI---LEGLQNSLARKLSYVEST---------NGKARQSASS---------------------------------LMSWGSKLSRG-------LDRMGMGNAMVRTEEANGYVDVLLKVFQHA--------------KIVENYIKQYTSLKKAPHL---------------------HHHKQIIVRLYKFADFLGNVICRFVVRDLGILADKYLKKG 833
BLAST of EWM26315.1 vs. NCBI_GenBank
Match: gi|470290315|ref|XP_004343103.1| (hypothetical protein CAOG_07244 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 65.0846 bits (157), Expect = 5.266e-8 Identity = 75/335 (22.39%), Postives = 116/335 (34.63%), Query Frame = 0 Query: 104 LRRPFWQLLLIQRTITSGGFLNPKLYVPRLAWEQYGARVNGLSTKMTAFEAVLSLLLGCPLPVQLLLNAPGSGVGKNNMPAPAKALGTLGLEEVDDQRVREDLLKAQKALQAFRELRAEFDVVQNSLARSFPFLRPVASEDSGARREGIGRRGRSSSRPGDSSSPVPSFGDAFSLAMSAGGGMQHIRGLMASFGRKIHKGAVSAMTAYERMGVLAAKISDAELQSYSALVCEVCEKAQRLDGWFLYLDDSRRMLEKFLSRHVSSCSSPQAPAASSFSSSSLSLMETLRALQHCVENSLVELLHCARFLQDVVVELVLRDVESLLDSYLRRARKVF 438 RP+W + ++ RT+T+GG+L PKLYVPR W Q G ++ +S+K + + L LL + E V D R K K L + A+ VQN+L+R PF+ G++++G+ +G S + G++ S R H +L KI+D Y V + EKA L+ W + + P A E+ L +L FL VV V+RD + LL Y+++ R F Sbjct: 87 FHRPYWLMRVLLRTMTTGGYLTPKLYVPRQVWFQTGLKLTSVSSKFMSCDTALIYLL------------------------------KMDKENVKD---RGSWNKLDKDLDELCTILAK---VQNNLSRKLPFIPESDLSIEGSKQQGVVAKGLGS----------------------------MMDGVVKSVSRAKH-------------NILKEKIADD--TKYIDTVIRLFEKASFLEDWLTFFE-----------------GQENEPTA---------------------ESILNKLKRLGDFLYFVVCAFVIRDFDILLQRYMKKLRTSF 304
BLAST of EWM26315.1 vs. NCBI_GenBank
Match: gi|765557079|gb|KJE97373.1| (hypothetical protein CAOG_007244 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 65.0846 bits (157), Expect = 6.991e-8 Identity = 75/335 (22.39%), Postives = 116/335 (34.63%), Query Frame = 0 Query: 104 LRRPFWQLLLIQRTITSGGFLNPKLYVPRLAWEQYGARVNGLSTKMTAFEAVLSLLLGCPLPVQLLLNAPGSGVGKNNMPAPAKALGTLGLEEVDDQRVREDLLKAQKALQAFRELRAEFDVVQNSLARSFPFLRPVASEDSGARREGIGRRGRSSSRPGDSSSPVPSFGDAFSLAMSAGGGMQHIRGLMASFGRKIHKGAVSAMTAYERMGVLAAKISDAELQSYSALVCEVCEKAQRLDGWFLYLDDSRRMLEKFLSRHVSSCSSPQAPAASSFSSSSLSLMETLRALQHCVENSLVELLHCARFLQDVVVELVLRDVESLLDSYLRRARKVF 438 RP+W + ++ RT+T+GG+L PKLYVPR W Q G ++ +S+K + + L LL + E V D R K K L + A+ VQN+L+R PF+ G++++G+ +G S + G++ S R H +L KI+D Y V + EKA L+ W + + P A E+ L +L FL VV V+RD + LL Y+++ R F Sbjct: 162 FHRPYWLMRVLLRTMTTGGYLTPKLYVPRQVWFQTGLKLTSVSSKFMSCDTALIYLL------------------------------KMDKENVKD---RGSWNKLDKDLDELCTILAK---VQNNLSRKLPFIPESDLSIEGSKQQGVVAKGLGS----------------------------MMDGVVKSVSRAKH-------------NILKEKIADD--TKYIDTVIRLFEKASFLEDWLTFFE-----------------GQENEPTA---------------------ESILNKLKRLGDFLYFVVCAFVIRDFDILLQRYMKKLRTSF 379 The following BLAST results are available for this feature:
BLAST of EWM26315.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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