EWM26315.1, cds4367 (CDS) Nannochloropsis gaditana

Overview
NameEWM26315.1
Unique Namecds4367
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:423087..424442 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26315.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100093g12.5112.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:423087..424442 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM26315.1 vs. NCBI_GenBank
Match: gi|585108321|gb|EWM26315.1| (hypothetical protein Naga_100093g12 [Nannochloropsis gaditana])

HSP 1 Score: 912.909 bits (2358), Expect = 0.000e+0
Identity = 451/451 (100.00%), Postives = 451/451 (100.00%), Query Frame = 0
Query:    1 MTSMEESGSASSYFAETAPSPERPACTFPTTSPSSVPRLCSQLGTMDFPVSVSNLCVEEGPARTASRRLSRQSLESTMDELNEVSKGIPDAEVKECLPEPENSLRRPFWQLLLIQRTITSGGFLNPKLYVPRLAWEQYGARVNGLSTKMTAFEAVLSLLLGCPLPVQLLLNAPGSGVGKNNMPAPAKALGTLGLEEVDDQRVREDLLKAQKALQAFRELRAEFDVVQNSLARSFPFLRPVASEDSGARREGIGRRGRSSSRPGDSSSPVPSFGDAFSLAMSAGGGMQHIRGLMASFGRKIHKGAVSAMTAYERMGVLAAKISDAELQSYSALVCEVCEKAQRLDGWFLYLDDSRRMLEKFLSRHVSSCSSPQAPAASSFSSSSLSLMETLRALQHCVENSLVELLHCARFLQDVVVELVLRDVESLLDSYLRRARKVFSRMVWELEDSEAP 451
            MTSMEESGSASSYFAETAPSPERPACTFPTTSPSSVPRLCSQLGTMDFPVSVSNLCVEEGPARTASRRLSRQSLESTMDELNEVSKGIPDAEVKECLPEPENSLRRPFWQLLLIQRTITSGGFLNPKLYVPRLAWEQYGARVNGLSTKMTAFEAVLSLLLGCPLPVQLLLNAPGSGVGKNNMPAPAKALGTLGLEEVDDQRVREDLLKAQKALQAFRELRAEFDVVQNSLARSFPFLRPVASEDSGARREGIGRRGRSSSRPGDSSSPVPSFGDAFSLAMSAGGGMQHIRGLMASFGRKIHKGAVSAMTAYERMGVLAAKISDAELQSYSALVCEVCEKAQRLDGWFLYLDDSRRMLEKFLSRHVSSCSSPQAPAASSFSSSSLSLMETLRALQHCVENSLVELLHCARFLQDVVVELVLRDVESLLDSYLRRARKVFSRMVWELEDSEAP
Sbjct:    1 MTSMEESGSASSYFAETAPSPERPACTFPTTSPSSVPRLCSQLGTMDFPVSVSNLCVEEGPARTASRRLSRQSLESTMDELNEVSKGIPDAEVKECLPEPENSLRRPFWQLLLIQRTITSGGFLNPKLYVPRLAWEQYGARVNGLSTKMTAFEAVLSLLLGCPLPVQLLLNAPGSGVGKNNMPAPAKALGTLGLEEVDDQRVREDLLKAQKALQAFRELRAEFDVVQNSLARSFPFLRPVASEDSGARREGIGRRGRSSSRPGDSSSPVPSFGDAFSLAMSAGGGMQHIRGLMASFGRKIHKGAVSAMTAYERMGVLAAKISDAELQSYSALVCEVCEKAQRLDGWFLYLDDSRRMLEKFLSRHVSSCSSPQAPAASSFSSSSLSLMETLRALQHCVENSLVELLHCARFLQDVVVELVLRDVESLLDSYLRRARKVFSRMVWELEDSEAP 451          
BLAST of EWM26315.1 vs. NCBI_GenBank
Match: gi|298712833|emb|CBJ48798.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 86.6557 bits (213), Expect = 3.810e-15
Identity = 68/266 (25.56%), Postives = 105/266 (39.47%), Query Frame = 0
Query:   90 DAEVKECLPEPENSLRRPFWQLLLIQRTITSGGFLNPKLYVPRLAWEQYGARVNGLSTKMTAFEAVLSLLLGCPLPVQLLLNAPGSGVGKNNMPAPAKALGTLGLEEVDDQRVREDLLKAQKALQAFRELRAEFDVVQNSLARSFPFLRPVASEDSGARREGIGRRGRSSSRPGDSSSPVPSFGDAFSLAMSAG--GGMQHIRGLMASFGRKIHKGAVSAMTAYERMGV-LAAKISDAELQSYSALVCEVCEKAQRLDGWFLYLDD 352
            DA       EP +  RR +W L L++ TI  GG L PKLY P+  W Q G +V+G + ++ A E+VL +++                    ++P P           VD +  +E       A +  R  R +   +Q  L+R FP++  V                                 D   LA   G    +  +  +M + GR +     SA+ A ER+G  +  K  D  L  Y  +V E+C + Q  D WF++L D
Sbjct:  100 DANQSTLEAEPTHPARRSYWVLRLVRTTILYGGHLTPKLYAPKEVWTQVGVKVSGFAPRIAALESVLYMVIDQV----------------KDLPKP-----------VDAEARKE-------AAEVMRTFRQQAHKLQTDLSRHFPYVVQV---------------------------------DPLGLAKELGPKSNLGRLNSVMKNIGRNVKH---SAVVAVERIGAGINGKHVDDGLAYYKQVVSELCSECQVFDSWFVHLQD 295          
BLAST of EWM26315.1 vs. NCBI_GenBank
Match: gi|552939903|gb|ESA22972.1| (hypothetical protein GLOINDRAFT_109812 [Rhizophagus irregularis DAOM 181602] >gi|595483323|gb|EXX70740.1| hypothetical protein RirG_084710 [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 72.0182 bits (175), Expect = 1.028e-9
Identity = 75/350 (21.43%), Postives = 131/350 (37.43%), Query Frame = 0
Query:   87 GIPDAEVKECLPEPENS-LR-RPFWQLLLIQRTITSGGFLNPKLYVPRLAWEQYGARVNGLSTKMTAFEAVLSLLLGCPLPVQLLLNAPGSGVGKNNMPAPAKALGTLGLEEVDDQRVREDLLKAQKALQAFRELRAEFDVVQNSLARSFPFLRPVASEDSGARREGIGRRGRSSSRPGDSSSPVPSFGDAFSLAMSAGGGMQHIRGLMASFGRKIHKGAVSAMTAYERMGVLAAKISDAELQSYSALVCEVCEKAQRLDGWFLYLDDSRRMLEKFLSRHVSSCSSPQAPAASSFSSSSLSLMETLRALQHCVENSLVELLHCARFLQDVVVELVLRDVESLLDSYLRRA 434
            G+P       LPEP  S +R +PFW + L++RT+T+GG+L PKL++P+  W Q   ++  + TKM++ E V + L                           + L  +   ++D         K  KAL+    +    + +QNSLAR   ++             G  R+  SS                                 + S+G K+ +G        +RMG+  A +   E   Y  ++ +V + A              +++E ++ ++ S   +P                       H  +  +V L   A FL +V+   V+RD+  L D YL++ 
Sbjct:  607 GLPHISSNNGLPEPPPSDIRLKPFWLMRLLERTMTTGGYLTPKLFIPQYLWLQGHVKLTAIDTKMSSCEVVSNCL---------------------------EKLEKISFSDLD---------KLSKALEGVDPI---LEGLQNSLARKLSYVEST---------NGKARQSASS---------------------------------LMSWGSKLSRG-------LDRMGMGNAMVRTEEANGYVDVLLKVFQHA--------------KIVENYIKQYTSLKKAPHL---------------------HHHKQIIVRLYKFADFLGNVICRFVVRDLGILADKYLKKG 833          
BLAST of EWM26315.1 vs. NCBI_GenBank
Match: gi|470290315|ref|XP_004343103.1| (hypothetical protein CAOG_07244 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 65.0846 bits (157), Expect = 5.266e-8
Identity = 75/335 (22.39%), Postives = 116/335 (34.63%), Query Frame = 0
Query:  104 LRRPFWQLLLIQRTITSGGFLNPKLYVPRLAWEQYGARVNGLSTKMTAFEAVLSLLLGCPLPVQLLLNAPGSGVGKNNMPAPAKALGTLGLEEVDDQRVREDLLKAQKALQAFRELRAEFDVVQNSLARSFPFLRPVASEDSGARREGIGRRGRSSSRPGDSSSPVPSFGDAFSLAMSAGGGMQHIRGLMASFGRKIHKGAVSAMTAYERMGVLAAKISDAELQSYSALVCEVCEKAQRLDGWFLYLDDSRRMLEKFLSRHVSSCSSPQAPAASSFSSSSLSLMETLRALQHCVENSLVELLHCARFLQDVVVELVLRDVESLLDSYLRRARKVF 438
              RP+W + ++ RT+T+GG+L PKLYVPR  W Q G ++  +S+K  + +  L  LL                               +  E V D   R    K  K L     + A+   VQN+L+R  PF+        G++++G+  +G  S                             + G++ S  R  H              +L  KI+D     Y   V  + EKA  L+ W  + +                      P A                     E+ L +L     FL  VV   V+RD + LL  Y+++ R  F
Sbjct:   87 FHRPYWLMRVLLRTMTTGGYLTPKLYVPRQVWFQTGLKLTSVSSKFMSCDTALIYLL------------------------------KMDKENVKD---RGSWNKLDKDLDELCTILAK---VQNNLSRKLPFIPESDLSIEGSKQQGVVAKGLGS----------------------------MMDGVVKSVSRAKH-------------NILKEKIADD--TKYIDTVIRLFEKASFLEDWLTFFE-----------------GQENEPTA---------------------ESILNKLKRLGDFLYFVVCAFVIRDFDILLQRYMKKLRTSF 304          
BLAST of EWM26315.1 vs. NCBI_GenBank
Match: gi|765557079|gb|KJE97373.1| (hypothetical protein CAOG_007244 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 65.0846 bits (157), Expect = 6.991e-8
Identity = 75/335 (22.39%), Postives = 116/335 (34.63%), Query Frame = 0
Query:  104 LRRPFWQLLLIQRTITSGGFLNPKLYVPRLAWEQYGARVNGLSTKMTAFEAVLSLLLGCPLPVQLLLNAPGSGVGKNNMPAPAKALGTLGLEEVDDQRVREDLLKAQKALQAFRELRAEFDVVQNSLARSFPFLRPVASEDSGARREGIGRRGRSSSRPGDSSSPVPSFGDAFSLAMSAGGGMQHIRGLMASFGRKIHKGAVSAMTAYERMGVLAAKISDAELQSYSALVCEVCEKAQRLDGWFLYLDDSRRMLEKFLSRHVSSCSSPQAPAASSFSSSSLSLMETLRALQHCVENSLVELLHCARFLQDVVVELVLRDVESLLDSYLRRARKVF 438
              RP+W + ++ RT+T+GG+L PKLYVPR  W Q G ++  +S+K  + +  L  LL                               +  E V D   R    K  K L     + A+   VQN+L+R  PF+        G++++G+  +G  S                             + G++ S  R  H              +L  KI+D     Y   V  + EKA  L+ W  + +                      P A                     E+ L +L     FL  VV   V+RD + LL  Y+++ R  F
Sbjct:  162 FHRPYWLMRVLLRTMTTGGYLTPKLYVPRQVWFQTGLKLTSVSSKFMSCDTALIYLL------------------------------KMDKENVKD---RGSWNKLDKDLDELCTILAK---VQNNLSRKLPFIPESDLSIEGSKQQGVVAKGLGS----------------------------MMDGVVKSVSRAKH-------------NILKEKIADD--TKYIDTVIRLFEKASFLEDWLTFFE-----------------GQENEPTA---------------------ESILNKLKRLGDFLYFVVCAFVIRDFDILLQRYMKKLRTSF 379          
The following BLAST results are available for this feature:
BLAST of EWM26315.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 5
Match NameE-valueIdentityDescription
gi|585108321|gb|EWM26315.1|0.000e+0100.00hypothetical protein Naga_100093g12 [Nannochlorops... [more]
gi|298712833|emb|CBJ48798.1|3.810e-1525.56conserved unknown protein [Ectocarpus siliculosus][more]
gi|552939903|gb|ESA22972.1|1.028e-921.43hypothetical protein GLOINDRAFT_109812 [Rhizophagu... [more]
gi|470290315|ref|XP_004343103.1|5.266e-822.39hypothetical protein CAOG_07244 [Capsaspora owczar... [more]
gi|765557079|gb|KJE97373.1|6.991e-822.39hypothetical protein CAOG_007244 [Capsaspora owcza... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4377rna4377Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications