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Properties
| Property Name | Value |
|---|
| Product | SNARE associated Golgi protein |
| Orig transcript id | gnl|cribi|Naga_100078g2.7014.mrna |
| Orig protein id | gnl|cribi|Naga_100078g2.7014 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:396369..398381 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4366 ID=rna4366|Name=rna4366|organism=Nannochloropsis gaditana|type=mRNA|length=5239bp
AGCTAGTGAATACGATAGCCTTCAAAACCCGCCAATGAATCACATACCAA
GCGGGAATCATTCATCCCGTCAGGCTTCCTGCAGGAGTCCACCGAGCGCT
GTCAATGCAAGTTCGCCCTATGATGGCTGGCAAATTGCACCATAAAGTTG
TTGTTCTCCCATACCATCGTACGTAACCCTAACCCTAACCCTAACAGAGC
TCAGGGCAGTCGTTTCCAAGGCTAGGGATAACACCATTAGCATTCCAGGT
TCGAAAGGTGTAGGGGTGTAAACCAAAGGGACTTCACTATTCGTACGACA
AAATTGCACGGATTCCCCTCATATTGCTCGTATTTTATCGAGACGCAGTT
TCTGCCATTAACCGAAGAAGATGGCATAGTTTCTGACAACGAGGCCTCTT
GGACTCCGCAATCGTCAATTAGTTGGCAGATTTTGTTGCTAGGTTTAACC
TCCCCACACCCTCAACGCCCCCGCTTCCTGAGACCTTGCTAGCAGCCGAT
GATCTGCAACCCGGACATGCCGTCTGCCTTTTTTTCCCACCCGGGTGTAT
TCTGAGTGGTCTTTTAAACAATAATAATGTATGGCGAATGCTACTCAGGA
TGGGTAGTGACCGCTTTAATCACAAGTTGTACTTACATTCCTTGTGTCAT
CCCACAGCTATGCCGCAAGCAGAGGCTGATGCTGCTCTGACCCCTCCTCC
AGCGCCGCCGCCGCCGCCATCACCACCTGTGGACCTTTACGAGCGTTTGA
CTCCATGGCAGCTGTTGACTTTCACGTTTGTATTTCCCATAGTACGATAC
GGGACTTACAAGCCTTTGCAACAAGTAGACCTCCTCCCCGTTGCCAAACG
AGACCGGGCCGCCCGCCTTTTGACGTGTCTGGAGGGGGAATGGGATATGG
AAATGCGTGCCTACAAATATCCTAGTCTCAATAGAGCATTATATCGCACT
CATCGTAGGGTTTTCTACCTCTGCGGTGCGCTACTTTTCACAGAATACGC
TATCATGTTGACCAAGCCTGTCGTCTTGCGCTACTTGCTCGCTTGGCTGA
AGGGCACAACATATATCGAAGCGGACGTGGGTGTGTACTTGCATTGGGGC
TATGGTTTTGGCGTTGCTTTAGCACTTGCAGGTCTAGACTTCATGCAAAC
CCTGGTCCACCACCGCGCATTTTATTTGACGATTCGCACGGGGTGGCGCT
TGCGCACGGCAGTGCAGGCCCTCCTGTACAAAAAAGTCCTTTCTCTGGAT
AACCGGTGGCAATCCACGGCGAGCACGGGCCAAATAGTCTCGACCCTCGC
GAACGACTGTCAACGGTACGAAGAATGTGCGACCAGCCTGCACTTTGTGT
GGGTGGCGCCGCTCATGGCACTGGCTGGCTTTGGGCTCTTGGTCATGTAT
GTAGGGGTGGTGTCCGCTGCGGTCGGCTGCGTCGCCACCGTGGGCGTGAT
CCCCCTCCAAGTTTGGTGCGGGAGGCAAGTGGGCCACGCCCGTCGCGTCA
CGGCGGGCCGCACGGACAAGCGCGTGAAGCTGATGGCCGAGGTGCTCTCT
GGGATCCAGACCGTCAAGGCCTTTGTGTGGGAGGCGCCCTTCCTCGCCAC
CATCTCCCAGGTCCGGGCCTCGGAGCGGAAATCCCTAGCCTGGGCCGCCA
GGATGCGGGCGATCACACTGGGCCTCTTTTTCGTGGCCCCCTCCTTGGCG
GCCTTCGTGACGTTTTTGACCTATTGGGCGTTGGGAAACCACCTGGAGCT
CCCGACGGTCTTCGCGGTGATGACGCTGCTGCAGACGTTGAGGGAGTGCG
CACGCTGGGTACCTCGAAGCATCGAGCAGGTTTCAGAGGCCCTGGTTGCC
AGTCGGCGTATTCTACCCTTGCTTTTGATGGCTGAAGCGGGGCCGAGCAC
ACAGAATTGCACGGAGGCAGGCAGTAGCGGGGGCAAAAAGGAAGGTGGCG
GCGCCAAGGGAAGGAAGGCTCAGTGGGGCCGGAGACCATCTGCGACAAGA
GCTTTTGCCGAAGTTTCCAGCAACAAGTCGTCCTTGTTATTGGGCAGCCG
CGACCCTCAAGGCAAAGAGCTGGGCGCACGCCTCCTCCCTCCCCCTCCTG
CGTTGCCCCCCTCGATCCCCCCGCTTCCGACTCTTACGGCGCCCCCAACG
CAGCCATCGGTCGGAAATAGAGGAGATATACTCGTCGAGATCGAAGACAG
TGGCTTCAGTTGGGCGACAGGAAATGTCAAGGGGCAGGGGATCGACTGGC
AGGCCCGTGCCGAGTTCCAGCTCAGTCTGAAACATCTCAGCATGCGTGTG
AGACGTGGAGAATTGTTGATCGTCACAGGTCCAGTCAGAAGCGGGAAATC
CACCCTCCTGGATGCCATATTGGGGGAGGTAAGTTGCGTGTACGGGAGCG
GAGTGCATTTGCGATCGGACCTCCGGATGGCCTACTGCTCGCAGCAACCG
TGGATTCAAGCAGGCTCCATCCGCGAGAATATCATATTTGCGGGCGTGCC
CCAGCGGCAACAGGAAACGGCAGCCCCCCCGGGGAATCTGGGTGTCTCGA
CCCCGCTCTTGCCTGAGGAAGATGGGTGCATCCGCAGCAATGACTCGCCA
GCCCGGCTGGTGGATGAGGCTCGATACTCAAATATTCTGCAGGCATGTGC
CCTCGACCACGATTTGGCGCACCTACCTTACGGAGACCTGACAGAAATCG
GCGAGCTCGGGGTGAACTTGAGCGGAGGGCAGCGGGCCCGCGTGGCGTTG
GCGCGGGCCGTGTATGCGGATGCCGACTTGGTTCTGCTGGATGACGTGCT
CTCCGCCGTGGACCCTCGTGTCTCCAAGCACCTCTTCCACGCATGTATCT
TGGACACCTTGGTCAAGGCTGGAAAGGGGGTGGTGCTGGTAACACATCAG
GTCCAATACCTTCCGTTGGCGACCCGGGTATGCCTCTTGGATGCTCAGGG
CCACATGGTGGCGCCGTGTGCGCCCTGGGAAGAAATACGGACCTCGGTGT
CGGGCTGGAGGGGCTTGGTACTGGATTTGCCGGATACCGCCACGGTAACA
GGGGCGGACTGGGAGACCACGAATGTGGGAAGAGATGAAGGAGAGGTTTG
CGATAAGGCAGAGGAGGCGGAGGAAGGAGAGGGAATGCCGAAGGACGCAG
ACATGGACGTTAGTTCCCCTGACGGCAGCGAGGCGCTCCGTCCTTCTGGT
TTCCTCGCCCAAACGCCCGCTGTCGGTCAAGCCACGGGCCGCGAGACCGC
TGCTTTTATTGCGGCCGAGGACCGTATCTTGGGCGAGGTCCATGGAGACA
CTTATGCGAGTTATTTGCGCAGCGGGGGATTGGCTTCCGGTGTATGGATT
ATGCTACTGCTCTTGATCAGTCAGGGTGTCCTTACCTTCGCGGACTTTTG
GCTCAAGATGTGGGCTTCAGATCAGGATCATGCCCGGACTGGTGCTTATT
ACCCGCGTGCATACGCCTACATAATTGCAGTGTGCGTGGTACTGGGTTTG
CTGCGGGCTGATCTTTTCTTCCGCTTTGCCTTGCGCGCGAGCACTTCCCT
CCACGACAAGGCCCTGCAAGCGGTACTGGCGGCGCCACTCGCTTTCTTTC
ATTCGAACCCTCGAGGACGAATACTGAACAAATTTTCTAAAGACCTGGAC
TCCGCGGATGATTTGTTGCCGGACACTCTCTTCGACTTCTTGCAATCGGC
GGGCTTGTGCGTGGCGGCGGTGGTAGTGGGGTGCATCGCAGTGCCATATC
TACCCCTGATTGTCGCCCCACTCCTGTATCTCTTTAGTAAGTACCGACGA
CAATTTGTAACGACGGCCCGGGAGGTTAAGCGCCTGGATGCCATCACTCG
AAGTCCTCTGTACGCGGAAGTTTCGTCATCTTTGCAGGGAGGGAAGGTGA
TCCGAGCTTTTCGAGCAGAGAGTATGATGGAAGAACGCTTCCTGAGGCGC
TTGGATGAGAACGGGAAGTGTGCCTTTCTCTTCATCATTCTATCTCGTTA
TTTGGGTTTTCGACTGGACATGTTGTGCGCAACCTTCCTGACATTCCTCT
GCGTCTTGGCCGTCGCTCTCCATGCGACCCTAGATCCCGGGCTCCTGGGC
TTATCCCTCACGTACGCCTTGGTGCTGTCGGGGACGTTCCAATGGGCCAT
CCGACAGAGTGCTCAAGCTGAAACGCTGCTGACATCTGTGGAACGACTGA
ATTACTACACGCGCTTGTCGTCGGAGGAAGACGAAGACAAAGAAATGAAG
ACACGTTTGGTCACGGGAAAAGAGAAGACCTTCGGGCAATTGTCTCCCAA
TTGGCCTCATTGCGGCGAACTTCTTGTTAAAAATCTCCAAGTCCGCTACC
GAGAAGACCTGCCTATAGTCCTCAATGGGGTGGATATCCGCATTCGCGGG
GGCCAGAAGGTGGGCATTGTCGGTCGTACTGGTTCGGGGAAAAGTTCCTT
CTTGTCCGCATTGCTGCGCCTGAACCAAATCGTGGGCGGCGACGTCGTGC
TAGACGGAGTGAGTATCCTTCACCTTTCCCGCCACGACGCGCGTCGATCT
GTGGCGTGGATCCCTCAGCAACCAGATCTCTTCGCCGGTACTTTGCGCTT
TAATCTCGATCCGTTCATGCGGCACGGTGATGCCGAGCTGCACGCGGCAT
TGAGGGACGTGAACCTGTCTCTGGACTTGGACATGCCCGTGGGGGAAGGA
GGGGGCAATTTATCCACAGGGACGCGGCAATTGCTTTCTCTCGCACGCGC
TGTCTTGCTTCGGCGGAAAGTGTTGCTCATGGATGAGGCGACAGCCAGCG
TCAGTTTTGTTGAGGACCAACGCATTCAGAACACACTGCGAACAGCTCCT
GTATTTAGAGACTGCACACTCGTGACTATCGCACATCGGATTAATACCGT
GATCGAATCCGACCTTATCTTAGTCTTTGCTGACGGCAAGTGTATCGAAC
AAGGTTCTCCTCAACATCTCTTGGCGACTAGCGGTTCGGTTTTTGCGGAG
ATGGTCCGGGAGACACGCGGAGTTGACACAGCTGACACAGCAATGTCAAA
AGCTGAAAACCTGGGATAGACGATAAATTTGGAAGGTGAATCGGTAGAAA
TTGATGTCCATTTGTCGTGGACATGAAAATATAAGACGGGAGTGGGTTAC
CCGGCACTTTGGGTAGGCTGTTGGAGGAAAGTACGTGTACCATACTACAA
AAGCAAAAGCAAAAGCAAATACATTATGCATCATTGATT back to topprotein sequence of rna4366 >rna4366-protein ID=rna4366-protein|Name=rna4366|organism=Nannochloropsis gaditana|type=polypeptide|length=554bp
MYLSSLSFFPRCPFPRPCARLIGPRSHYRLTCSNKHPRHREMGTPSCLSA
GELLNSPLPSAPSPESLTSRDESSIGFTEDMIEMMASAAAIRPPSVNLPP
RENITQENERKTDNFYDDRSSRHVCLQMNDTVSGAGEKEGNQSVGPTALP
SSRQGFCRRAYKTLRRLRSMLLVLSVVLICAVAGSYLCVRYRDQVLEGSE
WIRAHAPQSAVYYALITALWIILCLPSTIIELLGGAIFSYPVALLTLTVG
KQLGCMLAFLLAKVFASPTLRDALGHSSHSPTRGKEPNESVVENNDQEGG
DAPSLRHSRFPAAARPSKPMSKRKRTIRAMFIAMECHPWKITFLLRFLPI
PISIKNYGMAFLPCPTHVFFLCTFVASIPFTLIWVNLGESTKNLLEALNG
GGAAMKRHGIFAQELGLLVVGLALLMVLIFILRRYTQRYAAVIEAEEADG
VGTGAERAGDGKGEEDSLTRADEGGSKRAEDDDRRGVDPKKRGHGDSNER
SQAKGAGEEGHPTPGRICWEEMERDTEGAEEEEKEEKPSQEEPEGSPSSV
ASVA back to topmRNA from alignment at CM002463.1:396369..398381- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna4366 ID=rna4366|Name=rna4366|organism=Nannochloropsis gaditana|type=mRNA|length=2013bp|location=Sequence derived from alignment at CM002463.1:396369..398381- (Nannochloropsis gaditana)
GCTCGCGATGTCCTAACACAGACAGCACACAGCTCAACATGGCTATTTAC
GCATCGTGATGTGCATACAGGAATAATGTATTTGTCTTCTCTGTCATTTT
TCCCCCGGTGCCCATTTCCTCGCCCATGCGCGAGACTGATAGGGCCTCGA
TCCCATTATCGGCTCACGTGCTCCAATAAACACCCGCGTCACAGGGAAAT
GGGGACGCCAAGTTGTTTATCAGCAGGAGAGCTGCTCAATTCACCATTAC
CATCAGCTCCATCACCGGAGTCTCTGACATCCCGTGATGAGTCGAGCATC
GGATTTACGGAAGACATGATCGAAATGATGGCATCTGCAGCCGCAATTAG
ACCCCCCTCCGTGAATTTGCCACCGCGTGAGAATATCACCCAGGAAAATG
AAAGAAAAACTGATAATTTTTATGATGACCGGTCATCCCGGCATGTGTGC
CTCCAAATGAATGACACAGTGAGTGGCGCGGGTGAAAAGGAGGGTAATCA
GAGCGTCGGTCCAACAGCGCTCCCATCATCCAGGCAAGGATTTTGTAGAC
GGGCATACAAGACGCTGAGAAGGCTGCGATCTATGCTGTTAGTGTTATCT
GTTGTGCTGATATGCGCGGTTGCGGGTAGCTACTTGTGCGTGCGGTATCG
TGACCAAGTCTTGGAGGGATCCGAGTGGATTCGCGCGCACGCCCCCCAAT
CTGCCGTCTACTACGCTTTGATCACTGCCTTGTGGATCATTCTCTGTCTG
CCTTCCACCATCATCGAGCTCTTGGGGGGGGCCATCTTCTCCTACCCTGT
GGCCCTCCTCACCCTGACTGTCGGCAAGCAATTGGGATGCATGCTGGCAT
TTCTCCTCGCCAAGGTCTTCGCATCTCCGACCCTGCGGGATGCCCTGGGT
CATTCCTCACACTCTCCCACACGAGGGAAAGAGCCTAACGAGAGCGTGGT
GGAGAACAACGACCAGGAGGGAGGCGATGCCCCGAGCCTGAGACACTCAA
GGTTTCCTGCGGCGGCCAGGCCGTCCAAGCCCATGTCCAAGAGGAAGCGC
ACGATCCGGGCCATGTTTATTGCCATGGAGTGCCACCCTTGGAAAATAAC
CTTCCTGCTCCGCTTTCTGCCCATTCCCATTTCCATAAAAAATTACGGCA
TGGCCTTCTTGCCCTGCCCCACCCACGTGTTCTTCCTCTGCACGTTCGTA
GCCTCCATCCCCTTCACGTTGATTTGGGTGAATTTGGGAGAATCTACCAA
GAATCTTCTGGAGGCCCTCAATGGTGGGGGTGCAGCGATGAAGAGGCATG
GAATATTCGCACAAGAATTGGGCTTGTTGGTGGTAGGCCTCGCACTCTTG
ATGGTGCTGATCTTCATCTTGCGACGCTACACACAGCGTTACGCCGCGGT
GATCGAAGCCGAAGAGGCCGACGGGGTGGGGACAGGAGCAGAAAGAGCAG
GCGATGGGAAAGGAGAGGAGGATTCGTTGACGCGGGCCGATGAGGGGGGC
TCAAAGAGGGCGGAGGATGACGATCGGCGTGGTGTGGACCCCAAAAAACG
GGGTCATGGCGATTCGAACGAGCGGTCGCAGGCGAAGGGGGCGGGGGAGG
AGGGTCATCCCACGCCGGGAAGGATTTGTTGGGAAGAAATGGAGAGAGAC
ACGGAAGGGGCGGAGGAGGAGGAAAAAGAGGAGAAGCCATCACAGGAAGA
GCCGGAGGGGAGTCCCTCCAGCGTCGCGTCCGTCGCGTAAAGATAGGATT
TTGTATGAGGTTACAATAGCTACATGTGTGTGGTGTGACTGAAATGGAGA
TGAGTGAAATACGTGTGTGAGTGTCCAAAGCTTGAGTTGAGTGAGAGTGC
CGGACGAGAATCGTGCTTGTGCGTGTGGTTTGACAATGTACATACCCAAC
CATTGCACATAAAAATAAGCGACCCTCTAATAAATGGCTGCTTGTCCTGA
AACGTGCCTGCACACCCTGGGAAAGCAATGAGCGACACTTGAAACGTGGA
CGAGCCGGAGCGG back to topCoding sequence (CDS) from alignment at CM002463.1:396369..398381- >rna4366 ID=rna4366|Name=rna4366|organism=Nannochloropsis gaditana|type=CDS|length=1665bp|location=Sequence derived from alignment at CM002463.1:396369..398381- (Nannochloropsis gaditana)
ATGTATTTGTCTTCTCTGTCATTTTTCCCCCGGTGCCCATTTCCTCGCCC
ATGCGCGAGACTGATAGGGCCTCGATCCCATTATCGGCTCACGTGCTCCA
ATAAACACCCGCGTCACAGGGAAATGGGGACGCCAAGTTGTTTATCAGCA
GGAGAGCTGCTCAATTCACCATTACCATCAGCTCCATCACCGGAGTCTCT
GACATCCCGTGATGAGTCGAGCATCGGATTTACGGAAGACATGATCGAAA
TGATGGCATCTGCAGCCGCAATTAGACCCCCCTCCGTGAATTTGCCACCG
CGTGAGAATATCACCCAGGAAAATGAAAGAAAAACTGATAATTTTTATGA
TGACCGGTCATCCCGGCATGTGTGCCTCCAAATGAATGACACAGTGAGTG
GCGCGGGTGAAAAGGAGGGTAATCAGAGCGTCGGTCCAACAGCGCTCCCA
TCATCCAGGCAAGGATTTTGTAGACGGGCATACAAGACGCTGAGAAGGCT
GCGATCTATGCTGTTAGTGTTATCTGTTGTGCTGATATGCGCGGTTGCGG
GTAGCTACTTGTGCGTGCGGTATCGTGACCAAGTCTTGGAGGGATCCGAG
TGGATTCGCGCGCACGCCCCCCAATCTGCCGTCTACTACGCTTTGATCAC
TGCCTTGTGGATCATTCTCTGTCTGCCTTCCACCATCATCGAGCTCTTGG
GGGGGGCCATCTTCTCCTACCCTGTGGCCCTCCTCACCCTGACTGTCGGC
AAGCAATTGGGATGCATGCTGGCATTTCTCCTCGCCAAGGTCTTCGCATC
TCCGACCCTGCGGGATGCCCTGGGTCATTCCTCACACTCTCCCACACGAG
GGAAAGAGCCTAACGAGAGCGTGGTGGAGAACAACGACCAGGAGGGAGGC
GATGCCCCGAGCCTGAGACACTCAAGGTTTCCTGCGGCGGCCAGGCCGTC
CAAGCCCATGTCCAAGAGGAAGCGCACGATCCGGGCCATGTTTATTGCCA
TGGAGTGCCACCCTTGGAAAATAACCTTCCTGCTCCGCTTTCTGCCCATT
CCCATTTCCATAAAAAATTACGGCATGGCCTTCTTGCCCTGCCCCACCCA
CGTGTTCTTCCTCTGCACGTTCGTAGCCTCCATCCCCTTCACGTTGATTT
GGGTGAATTTGGGAGAATCTACCAAGAATCTTCTGGAGGCCCTCAATGGT
GGGGGTGCAGCGATGAAGAGGCATGGAATATTCGCACAAGAATTGGGCTT
GTTGGTGGTAGGCCTCGCACTCTTGATGGTGCTGATCTTCATCTTGCGAC
GCTACACACAGCGTTACGCCGCGGTGATCGAAGCCGAAGAGGCCGACGGG
GTGGGGACAGGAGCAGAAAGAGCAGGCGATGGGAAAGGAGAGGAGGATTC
GTTGACGCGGGCCGATGAGGGGGGCTCAAAGAGGGCGGAGGATGACGATC
GGCGTGGTGTGGACCCCAAAAAACGGGGTCATGGCGATTCGAACGAGCGG
TCGCAGGCGAAGGGGGCGGGGGAGGAGGGTCATCCCACGCCGGGAAGGAT
TTGTTGGGAAGAAATGGAGAGAGACACGGAAGGGGCGGAGGAGGAGGAAA
AAGAGGAGAAGCCATCACAGGAAGAGCCGGAGGGGAGTCCCTCCAGCGTC
GCGTCCGTCGCGTAA back to top
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