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Properties
| Property Name | Value |
|---|
| Product | ubiquitin-like protein atg12 |
| Orig transcript id | gnl|cribi|Naga_100078g13.7015.mrna |
| Orig protein id | gnl|cribi|Naga_100078g13.7015 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:368583..370181 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4355 ID=rna4355|Name=rna4355|organism=Nannochloropsis gaditana|type=mRNA|length=1587bp
ATGGTCAAGCCTGTCGACCTTACTGTCCCCGCCAGTGCCGACGCGTTCGA
CGTGGCGGCAGCCTTCCAGGGCCTCTGCGACCGTTCCAATGAGATGTCCG
AGGAGAAATTCATGGCCACGGTAGAAGCCTTGGAGCCCTGGTTGGTCCCC
GATATCATCGACTTTCTGGTCGCCAAGATCGCGGGCTTCGGGAAGGAGCG
TGAGCCGGCCATCTCCCTCTTGACCAAGCTGGATGCGGCCTTCGTCCGCC
GCAAGCTCCCCGACATCCTCCAGCCCGTCATTAACATGTGCACAGACACC
TCTAAGAAAGTGCGCGAGCTCTCCCTCAAGTGCCTGGAGCACCTGGTGCA
GACGAACGGGAATTCGGACTTGGATAGGGTCATCCCGGGCCTGGTGCAGG
CTCTGAAGGACCCGAACCACACGGTGCAAGCCATCGACGACCTGGCCTCG
TGCGTCTTCGTGCAGGATGTGGAGGCCCCCGCCCTGGCCGTGATCATGCC
CATCATCCGCCGCGGCCTCCGCCACAAGCAGACGGAGATCCAGCGCAAGT
CCTGCGTGATCCTCGACAACGTCTGCCGCCTGGTCGACGACCCCAAGGAG
CTCTCCATCGCCATCCCGGAGATCCTGCCTTTGGTCAAGTACTGCGCCGA
GAACATCTCCAAACCGGAGGCCCGCGAGGTGGCCAACCGGGCGCTCAAGA
CCATCCTCGACCACTACGACGAGAAGCTGGTTTTGCGGAAGTGGAGCGTG
GAGGAGGTGACGGCCATGATCAAGAAGCACGGGGAGCCGACCGAGCACAT
CGTCAAGTGCACCAAGAACCTGTGCGACGCCTACCATTTCGAGAAGAAGG
ACTGGGAGCGCGTCTACGGCCAGAAGCATGCGGAGCTGTGCGCCAAAGTC
CTGAACGACTGCGAGATCTTGGCCAGCCCCAACACAATCATCTTCGAGGA
CACGGAGGAAGGGCAGGACCTGTACAAGGGCGAGTTCTCTCTGGCCTACG
GGACCCTCACCCTCCTGCGCAAGACGCGGCTGCACTTGAAACGCAACCGC
TTCTACGGCCTGCTGGGCCCCAACAACTGCGGGAAGACGACGCTGATGCG
CGCCATCGACCACGAGCAGATCGAGGGCTTCCCCAAGAAGACGGAGCTTA
AGACCCTCTTCGTCGAGCACGAGATCGAGGAGCGGGAGGTGGGCGAGGAC
GAGACCGGGTACCCGATCTTCAACACGGATCTGTCGGGGACGGACTGGGT
GGTGGACTACTGCAACAACGTGGTCAAGGTGCTGCCCGCCATCACCACGG
AGGCGGCGGCGGCGGCCATGGGGGAGATGGGCTTCGGGAAGGACCGCGCG
GCCGATGCCGACATGCCCGTGACCACGTACTCGGGTGGCTGGAAGGTAAA
GATGCAGCTGGTGGCGGCCACGCTTATCAACGCCGATCTGCTCATGCTGG
ACGAGCCCACGGGGCACTTGGACGTGAAGAACATTGCCTGGCTGAAAGGC
TGGCTTAAGTCCTTCTTGCGGGGGGGGGCTCCATCATCACCACCTCCCAC
GACTCGGAGTTCTTGCAGGAGATGTGCACGCACGTGA back to topprotein sequence of rna4355 >rna4355-protein ID=rna4355-protein|Name=rna4355|organism=Nannochloropsis gaditana|type=polypeptide|length=213bp
MEEEREEDATSSGAPAASPPSVPQAQAFDEPPSMPTLRIEREDDIPSRTS
QATSTALTAATPAMCSRPGGPAGEDFSMNASTSTGGTVDLLRPSASTASS
PSAPTPQSTQHSASLCPGQTAPAHAARVKLQLMAVGRAPRLTQSKFFVQA
SEPFRALFPVLRRLLQLKESEALFVFVNSAFAPAPEDKFGDLQKCFSRGG
ALIINYSLDEAWG back to topmRNA from alignment at CM002463.1:368583..370181- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna4355 ID=rna4355|Name=rna4355|organism=Nannochloropsis gaditana|type=mRNA|length=1599bp|location=Sequence derived from alignment at CM002463.1:368583..370181- (Nannochloropsis gaditana)
CTGTGTCCAGTCTAAGTGACGCTGTACCCAACTGATTTGGCACTGTCTCC
AGATCAGGCCGCATATTCCAGACGGGGTCTGTAAGGTGGGGGGAGGAGGT
CGGGCTCGACTGGGGGAGTGTACGTCGACAAAGGCGAGGAAGAGAGATCA
GAAGACGAATGCTTGCACAAGTGCACGTGTGAACGTTGTAGACACGTGGC
ATTAAATTTAACGGAGAACATTCGGAAGAAGTGTCCAAGGACCTCGACTT
GAAAGAAAGCCCGCTGAGCTGGACTGAGGCTTTAGGAACGTACTCCTTCA
AAATGTTCTACTGCTCTTTCTTCCAAAATTTCCAGGAACAACAGTGTGAA
AAACTTGCTAGCAACACTACTCGGCATCAGTAATTTGCCTAGTACAGTGA
AATGGAAGAGGAAAGAGAGGAGGATGCCACATCGTCAGGTGCCCCTGCAG
CCTCCCCGCCGTCAGTGCCGCAAGCACAGGCCTTCGACGAGCCTCCATCC
ATGCCCACACTGAGGATTGAAAGAGAGGACGACATCCCCTCGCGTACAAG
CCAAGCGACAAGTACAGCATTGACCGCGGCAACCCCCGCCATGTGTTCTC
GACCTGGCGGGCCCGCAGGCGAAGACTTCTCCATGAACGCATCGACAAGC
ACTGGGGGCACGGTAGACCTTCTCCGTCCTTCAGCATCCACCGCTTCCTC
CCCTTCGGCACCTACTCCTCAATCGACACAACATTCAGCGTCTTTATGTC
CTGGGCAAACTGCACCTGCGCATGCGGCTAGGGTAAAACTTCAACTTATG
GCTGTCGGCCGCGCCCCTCGATTGACGCAGAGCAAGTTCTTCGTTCAGGC
AAGCGAGCCATTCCGCGCTTTGTTCCCTGTCCTGCGTCGCTTGCTTCAGC
TGAAAGAAAGCGAAGCGCTTTTTGTCTTCGTCAACTCGGCCTTTGCTCCT
GCGCCAGAGGATAAATTTGGAGATCTCCAGAAATGCTTCAGCAGGGGTGG
TGCCCTGATAATTAATTACAGCCTAGACGAGGCGTGGGGATGAGAATAAG
GTATGTGATACCGTCCCACACTCTGTATAAATGCAATAGGACCGCCTAAT
CTACGGGGCATCCTTTTATTGTTCTTTTGAAGGCAGCGGACAGGCACTTA
GAGATGCTCCAGCCGGGCCTGACCTGATAGCTATATGCGTGGCGCTGGAC
CAGGGATATGGCACCATTTTGAGTCAGATCTGCTCTTTTTATGCCTCGGA
CGACTAAGAAATGACCGAAAAGAGGCACGGACACGGGTAAGGACACTCTT
GCATTGGCTCCTTCGACGACTTCCGCGATGCCGATTTGGCACCTTACTTT
AGGCTGGGCTGTTTTGATTATGTGTGGTGTACGGTTTACATACATAGGTG
TACGGCACTTTTATTGCTTCGCTATTGGAATATGTGCCCTTGCTGATTTG
GTGAAGGAAACAAGGTGATGTCGATCATTATCTACTCGAGTAATTTTACA
TGAGGATGCGCATTTATCCAAGCGCGACAACTCCCCCTTTCCAAAAAGGG
CCTTTTTCTTAAAATAAAGAAAGTAAATGTACATAGGAAGTCGTAAACC back to topCoding sequence (CDS) from alignment at CM002463.1:368583..370181- >rna4355 ID=rna4355|Name=rna4355|organism=Nannochloropsis gaditana|type=CDS|length=642bp|location=Sequence derived from alignment at CM002463.1:368583..370181- (Nannochloropsis gaditana)
ATGGAAGAGGAAAGAGAGGAGGATGCCACATCGTCAGGTGCCCCTGCAGC
CTCCCCGCCGTCAGTGCCGCAAGCACAGGCCTTCGACGAGCCTCCATCCA
TGCCCACACTGAGGATTGAAAGAGAGGACGACATCCCCTCGCGTACAAGC
CAAGCGACAAGTACAGCATTGACCGCGGCAACCCCCGCCATGTGTTCTCG
ACCTGGCGGGCCCGCAGGCGAAGACTTCTCCATGAACGCATCGACAAGCA
CTGGGGGCACGGTAGACCTTCTCCGTCCTTCAGCATCCACCGCTTCCTCC
CCTTCGGCACCTACTCCTCAATCGACACAACATTCAGCGTCTTTATGTCC
TGGGCAAACTGCACCTGCGCATGCGGCTAGGGTAAAACTTCAACTTATGG
CTGTCGGCCGCGCCCCTCGATTGACGCAGAGCAAGTTCTTCGTTCAGGCA
AGCGAGCCATTCCGCGCTTTGTTCCCTGTCCTGCGTCGCTTGCTTCAGCT
GAAAGAAAGCGAAGCGCTTTTTGTCTTCGTCAACTCGGCCTTTGCTCCTG
CGCCAGAGGATAAATTTGGAGATCTCCAGAAATGCTTCAGCAGGGGTGGT
GCCCTGATAATTAATTACAGCCTAGACGAGGCGTGGGGATGA back to top
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