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Properties
| Property Name | Value |
|---|
| Product | hydroxyacyl-coenzyme a mitochondrial precursor |
| Orig transcript id | gnl|cribi|Naga_100078g17.7004.mrna |
| Orig protein id | gnl|cribi|Naga_100078g17.7004 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:361860..363623 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4352 ID=rna4352|Name=rna4352|organism=Nannochloropsis gaditana|type=mRNA|length=1087bp
CCACAAATTGACTTTCTGAGCGATGCCACATCGAGGAGAGGGAAAGGGCG
CCAGACGCACATTTTGTGGTCATTCAAGGTCCTTTCTTTCCCCCATATGC
GATCTCATCTGGTAATAATCCACTAGTTTCACTCCCACAGTGATCCCAGT
GTGTTTTTTTCCTCCGGGGGGATGGCGGCGCAGTCGCGGTCGAGCGAAAT
GGAATTTCTGGCCGAAGAGATGATTGTTGAAATCGAGGCGCGTTTCAACC
ATCCTCCTCTGAAGCTGATTCGGGGTACCTTTGGTCCCTTCTACCCAAAC
CAACGTGCCAAGGTACCGCTCTGGCTAGGCCTGTCCCTGAAAAAGCAAAA
AAAATGCCGTCTGGTCCTCCCGGAATGGCTGGATAGCGAGCATCTTGCCG
AGGTGCTGCGGCAAGAAAGGGCACAAGAAGGTATTTTTCAAGACTTGCCC
TTCTACTACGTGGAAATCGCCACGCTGTTGCTCGCGACGGCAGCGGACGA
GTTTCCCATGCCCGACCGAACCCGCTCACTCGTGGAGGACATCGAAAACG
TGCGGATGGAGAAGATTCGGAGGGGTCTGCAGGGCATGAGCGACACGGTC
TTGCGGGGTCGGAGTGTGATGAGCACGAAGATGAACCACGTGGGGGCGAT
GGAGATCACAACAGTCCGCGGTTTCTTGACCGAGGCCATGGGCTTGTTCT
ACACTCTGAGCGGGCAGGAGGTGGTGGCGCAGGGGGGGGGTAGGGAGGGG
GGGGTGGGGAGACGACTGGGCGTAGGAGGCGCGGCGTCGGTGGCCGGGGA
AAGGACTGGCAGCGGTCGGAATGGCCCTCCCAGAAAATTACGACGCTTTC
GGGAGGAGGCCGCGAGGGAAGGAACCAACTGATGTACAGGGCGTGGGGAG
GGGACGACGGCAAAGGCGTGTAAGAAAGACGTGAGAGGGAGGCCCGTGTG
CATACTCATGGGGATAAAACAAAAAGAGGATTTCGCAAATTCGTGTGGGC
GTCCAAGTCGTTTCTTCCGTGCTCGCCATTTGAGGACCAGGCGGGCCGCC
AGCCACCTACTGTACTACTCCTGCCTCCTAATTTACC back to topprotein sequence of rna4352 >rna4352-protein ID=rna4352-protein|Name=rna4352|organism=Nannochloropsis gaditana|type=polypeptide|length=361bp
MLSYVRLSSFSFSPISKGMGRYYRSRHLSALGAPPRLSLKPDEPRRCHVQ
QRRTLAATPHYDIKKVGVVGLGLMGHGIGLVSAQAGYEVIAVEAQAPALE
SGKKRIDKSLSKILSKAVEKGKMTLEAAEKEKEKVERRITYSLDLAALRD
ADLVVEAIVENLDVKIPFYKQLGSLVKPTAIFGSNTSSLKIGDFAAPSGR
PQQFVGLHFFNPVQLMRLVEIVRLHETEPAVFETVRGYVARIGKTAVTCQ
DTPGFIVNRLLVPALVQAMLMKERGEASVEDIDVAMQLGAGHPMGPLHLA
DYIGLDTCLFILEGWVKKYPNEPAFIVPSSLRALVQGGKLGRKSGEGFYV
WEGDKKVKPAM back to topmRNA from alignment at CM002463.1:361860..363623+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4352 ID=rna4352|Name=rna4352|organism=Nannochloropsis gaditana|type=mRNA|length=1764bp|location=Sequence derived from alignment at CM002463.1:361860..363623+ (Nannochloropsis gaditana)
TCCATCCACAGTGTCGCCCTCCACTAGTGCTATGTTATCATACGTGCGgc
tgtcctctttttccttctccccgatCTCcaaggggatgggaaggtatTAT
AGAAGCCGTCATCTCTCCGCCTTGggcgcccctcctcgtctcagCCTCAA
GCCTGATGAGCCGCGACGATGTCACGTCCAACAACGTCGGACGCTTGCTG
CTACGCCACACTACGACATCAAAAAAGTGGGTGTGGTAGGCTTGGGGCTC
ATGGGACATGGTATTGGCCTGGTGAGCGCGCAGGCGGGCTACGAGGTGAT
AGCAGTTGAAGCTCAGGCACCAGCCTTGGAGTCCGGGAAGAAACGGATTG
ATAAGTCACTGAGCAAGATATTGAGTAAagcggtggagaaagggaaaatg
aCGTTGGAGGCagccgagaaggagaaagaaaaggtggAGCGACGCATCAC
CTACTCATTGGATTTGGCGGCCTTGAGAGACGCCGACCTCGTTGTCGAGG
CGATTGTGGAAAATCTAGGTAAGGAACGCCGAAACATGTCCCGGGCCGGA
CGTGCCGATGCAACATATTCAAACTGACCGCTTCACTCGACCTAGGCTCC
GCATGCACACGTTGACAAGGTCCTTGGGCCCCAGCGTGGGCAACAAGCCA
TGTCGATTCACCGCCCCTCTCGTACCTGTAttgcccccttcttccagatG
TAAAGATCCCCTTCTACAAGCAGCTGGGCAGCCTGGTGAAGCCCACTGCC
ATTTTCGGGAgcaacacctcctccctcaaaatCGGCGACTTCGCGGCCCC
GTCCGGACGCCCCCAGCAGTTCGTcggcctccatttcttcAACCCGGTGC
AGCTCATGCGCCTGGTGGAGATCGTCCGCTTGCACGAGACCGAGCCTGCG
GTCTTCGAGACCGTGAGGGGGTACGTGGCACGGATCGGAAAGACGGCGGT
CACGTGCCAGGACACGCCAGGCTTCATCGTCAACCGCCTGTTGGTCCCGG
CCTTGGTGCAGGCGATGCTcatgaaagagaggggggaggcgagcgtggag
gacatcgacGTGGCCATGCAGCTAGGCGCAGGACATCCCATGGGGCCTCT
GCACCTGgtaaggagaaggagggagggggacgcaTGGGGGAATgggcagg
atggaggggggcgttggatgagggagggttaggggaggggaggacgggcc
aTGTGGGCAAGGAGAGATACGctccaagacggaggaggatgacggccTCT
CGCTGCACACGGgcgtttcctttccctgtcgTTGGCGCCTCCATACTGAC
ATATCCCTCGTCTTTTGCTCATggaccttccctccatcaGGCCGACTACA
TCGGGCTCGATACTTGCCTCTTCATTCTAGAAGGGTGGGTGAAAAAGTAC
CCAAATGAGCCAGCCTtcatcgtcccctcctctcttcgcgCGCTTGTGCA
AGGTGGAAAATTGGGGCGCAAGTCGGGGGAAGGCTTTTATGtgtgggagg
gcgacaagaaAGTCAAGCCAGCCATGTGAGGTAGGAGGctcggagggaag
aaagcctTGTAGCAGATACAGGCAGGGTGAGAAATCTAGTGAGCAGTCGC
TGAGATGTAGGTGAGAGGAGTGGGAGCGGATTAAGTAGGCATTCCGATTC
TATccggggggtgggaaaggccaGAGGAGAGCGGCGCAACGAGCAATTTT
GTCACGAACAGGCGCACACATATTtcagagggaaaagaaaaatcaaACAG
CGCCCTTTCACTTC back to topCoding sequence (CDS) from alignment at CM002463.1:361860..363623+ >rna4352 ID=rna4352|Name=rna4352|organism=Nannochloropsis gaditana|type=CDS|length=3258bp|location=Sequence derived from alignment at CM002463.1:361860..363623+ (Nannochloropsis gaditana)
ATGTTATCATACGTGCGgctgtcctctttttccttctccccgatCTCcaa
ggggatgggaaggtatTATAGAAGCCGTCATCTCTCCGCCTTGggcgccc
ctcctcgtctcagCCTCAAGCCTGATGAGCCGCGACGATGTCACGTCCAA
CAACGTCGGACGCTTGCTGCTACGCCACACTACGACATCAAAAAAGTGGG
TGTGGTAGGCTTGGGGCTCATGGGACATGGTATTGGCCTGGTGAGCGCGC
AGGCGGGCTACGAGGTGATAGCAGTTGAAGCTCAGGCACCAGCCTTGGAG
TCCGGGAAGAAACGGATTGATAAGTCACTGAGCAAGATATTGAGTAAagc
ggtggagaaagggaaaatgaCGTTGGAGGCagccgagaaggagaaagaaa
aggtggAGCGACGCATCACCTACTCATTGGATTTGGCGGCCTTGAGAGAC
GCCGACCTCGTTGTCGAGGCGATTGTGGAAAATCTAGatGTAAAGATCCC
CTTCTACAAGCAGCTGGGCAGCCTGGTGAAGCCCACTGCCATTTTCGGGA
gcaacacctcctccctcaaaatCGGCGACTTCGCGGCCCCGTCCGGACGC
CCCCAGCAGTTCGTcggcctccatttcttcAACCCGGTGCAGCTCATGCG
CCTGGTGGAGATCGTCCGCTTGCACGAGACCGAGCCTGCGGTCTTCGAGA
CCGTGAGGGGGTACGTGGCACGGATCGGAAAGACGGCGGTCACGTGCCAG
GACACGCCAGGCTTCATCGTCAACCGCCTGTTGGTCCCGGCCTTGGTGCA
GGCGATGCTcatgaaagagaggggggaggcgagcgtggaggacatcgacG
TGGCCATGCAGCTAGGCGCAGGACATCCCATGGGGCCTCTGCACCTGGCC
GACTACATCGGGCTCGATACTTGCCTCTTCATTCTAGAAGGGTGGGTGAA
AAAGTACCCAAATGAGCCAGCCTtcatcgtcccctcctctcttcgcgCGC
TTGTGCAAGGTGGAAAATTGGGGCGCAAGTCGGGGGAAGGCTTTTATGtg
tgggagggcgacaagaaAGTCAAGCCAGCCATGTGAATGTTATCATACGT
GCGgctgtcctctttttccttctccccgatCTCcaaggggatgggaaggt
atTATAGAAGCCGTCATCTCTCCGCCTTGggcgcccctcctcgtctcagC
CTCAAGCCTGATGAGCCGCGACGATGTCACGTCCAACAACGTCGGACGCT
TGCTGCTACGCCACACTACGACATCAAAAAAGTGGGTGTGGTAGGCTTGG
GGCTCATGGGACATGGTATTGGCCTGGTGAGCGCGCAGGCGGGCTACGAG
GTGATAGCAGTTGAAGCTCAGGCACCAGCCTTGGAGTCCGGGAAGAAACG
GATTGATAAGTCACTGAGCAAGATATTGAGTAAagcggtggagaaaggga
aaatgaCGTTGGAGGCagccgagaaggagaaagaaaaggtggAGCGACGC
ATCACCTACTCATTGGATTTGGCGGCCTTGAGAGACGCCGACCTCGTTGT
CGAGGCGATTGTGGAAAATCTAGatGTAAAGATCCCCTTCTACAAGCAGC
TGGGCAGCCTGGTGAAGCCCACTGCCATTTTCGGGAgcaacacctcctcc
ctcaaaatCGGCGACTTCGCGGCCCCGTCCGGACGCCCCCAGCAGTTCGT
cggcctccatttcttcAACCCGGTGCAGCTCATGCGCCTGGTGGAGATCG
TCCGCTTGCACGAGACCGAGCCTGCGGTCTTCGAGACCGTGAGGGGGTAC
GTGGCACGGATCGGAAAGACGGCGGTCACGTGCCAGGACACGCCAGGCTT
CATCGTCAACCGCCTGTTGGTCCCGGCCTTGGTGCAGGCGATGCTcatga
aagagaggggggaggcgagcgtggaggacatcgacGTGGCCATGCAGCTA
GGCGCAGGACATCCCATGGGGCCTCTGCACCTGGCCGACTACATCGGGCT
CGATACTTGCCTCTTCATTCTAGAAGGGTGGGTGAAAAAGTACCCAAATG
AGCCAGCCTtcatcgtcccctcctctcttcgcgCGCTTGTGCAAGGTGGA
AAATTGGGGCGCAAGTCGGGGGAAGGCTTTTATGtgtgggagggcgacaa
gaaAGTCAAGCCAGCCATGTGAATGTTATCATACGTGCGgctgtcctctt
tttccttctccccgatCTCcaaggggatgggaaggtatTATAGAAGCCGT
CATCTCTCCGCCTTGggcgcccctcctcgtctcagCCTCAAGCCTGATGA
GCCGCGACGATGTCACGTCCAACAACGTCGGACGCTTGCTGCTACGCCAC
ACTACGACATCAAAAAAGTGGGTGTGGTAGGCTTGGGGCTCATGGGACAT
GGTATTGGCCTGGTGAGCGCGCAGGCGGGCTACGAGGTGATAGCAGTTGA
AGCTCAGGCACCAGCCTTGGAGTCCGGGAAGAAACGGATTGATAAGTCAC
TGAGCAAGATATTGAGTAAagcggtggagaaagggaaaatgaCGTTGGAG
GCagccgagaaggagaaagaaaaggtggAGCGACGCATCACCTACTCATT
GGATTTGGCGGCCTTGAGAGACGCCGACCTCGTTGTCGAGGCGATTGTGG
AAAATCTAGatGTAAAGATCCCCTTCTACAAGCAGCTGGGCAGCCTGGTG
AAGCCCACTGCCATTTTCGGGAgcaacacctcctccctcaaaatCGGCGA
CTTCGCGGCCCCGTCCGGACGCCCCCAGCAGTTCGTcggcctccatttct
tcAACCCGGTGCAGCTCATGCGCCTGGTGGAGATCGTCCGCTTGCACGAG
ACCGAGCCTGCGGTCTTCGAGACCGTGAGGGGGTACGTGGCACGGATCGG
AAAGACGGCGGTCACGTGCCAGGACACGCCAGGCTTCATCGTCAACCGCC
TGTTGGTCCCGGCCTTGGTGCAGGCGATGCTcatgaaagagaggggggag
gcgagcgtggaggacatcgacGTGGCCATGCAGCTAGGCGCAGGACATCC
CATGGGGCCTCTGCACCTGGCCGACTACATCGGGCTCGATACTTGCCTCT
TCATTCTAGAAGGGTGGGTGAAAAAGTACCCAAATGAGCCAGCCTtcatc
gtcccctcctctcttcgcgCGCTTGTGCAAGGTGGAAAATTGGGGCGCAA
GTCGGGGGAAGGCTTTTATGtgtgggagggcgacaagaaAGTCAAGCCAG
CCATGTGA back to top
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