EWM26329.1, cds4342 (CDS) Nannochloropsis gaditana

Overview
NameEWM26329.1
Unique Namecds4342
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:361891..362377 +
Alignment locationCM002463.1:362557..362966 +
Alignment locationCM002463.1:363200..363388 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26329.1
Producthydroxyacyl-coenzyme a mitochondrial precursor
Orig transcript idgnl|cribi|Naga_100078g17.7004.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:361891..362377 +
CM002463.1supercontigCM002463.1:362557..362966 +
CM002463.1supercontigCM002463.1:363200..363388 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006629lipid metabolic process
GO:0006631fatty acid metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
GO:0016491oxidoreductase activity
GO:00038573-hydroxyacyl-CoA dehydrogenase activity
GO:0070403NAD+ binding
Vocabulary: INTERPRO
TermDefinition
IPR0089276-PGluconate_DH_C-like
IPR016040NAD(P)-bd_dom
IPR0133286PGD_dom_2
IPR0061763-OHacyl-CoA_DH_NAD-bd
IPR0061083HC_DH_C
IPR0226943-OHacyl-CoA_DH
Homology
BLAST of EWM26329.1 vs. NCBI_GenBank
Match: gi|585108336|gb|EWM26329.1| (hydroxyacyl-coenzyme a mitochondrial precursor [Nannochloropsis gaditana])

HSP 1 Score: 735.717 bits (1898), Expect = 0.000e+0
Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 0
Query:    1 MLSYVRLSSFSFSPISKGMGRYYRSRHLSALGAPPRLSLKPDEPRRCHVQQRRTLAATPHYDIKKVGVVGLGLMGHGIGLVSAQAGYEVIAVEAQAPALESGKKRIDKSLSKILSKAVEKGKMTLEAAEKEKEKVERRITYSLDLAALRDADLVVEAIVENLDVKIPFYKQLGSLVKPTAIFGSNTSSLKIGDFAAPSGRPQQFVGLHFFNPVQLMRLVEIVRLHETEPAVFETVRGYVARIGKTAVTCQDTPGFIVNRLLVPALVQAMLMKERGEASVEDIDVAMQLGAGHPMGPLHLADYIGLDTCLFILEGWVKKYPNEPAFIVPSSLRALVQGGKLGRKSGEGFYVWEGDKKVKPAM 361
            MLSYVRLSSFSFSPISKGMGRYYRSRHLSALGAPPRLSLKPDEPRRCHVQQRRTLAATPHYDIKKVGVVGLGLMGHGIGLVSAQAGYEVIAVEAQAPALESGKKRIDKSLSKILSKAVEKGKMTLEAAEKEKEKVERRITYSLDLAALRDADLVVEAIVENLDVKIPFYKQLGSLVKPTAIFGSNTSSLKIGDFAAPSGRPQQFVGLHFFNPVQLMRLVEIVRLHETEPAVFETVRGYVARIGKTAVTCQDTPGFIVNRLLVPALVQAMLMKERGEASVEDIDVAMQLGAGHPMGPLHLADYIGLDTCLFILEGWVKKYPNEPAFIVPSSLRALVQGGKLGRKSGEGFYVWEGDKKVKPAM
Sbjct:    1 MLSYVRLSSFSFSPISKGMGRYYRSRHLSALGAPPRLSLKPDEPRRCHVQQRRTLAATPHYDIKKVGVVGLGLMGHGIGLVSAQAGYEVIAVEAQAPALESGKKRIDKSLSKILSKAVEKGKMTLEAAEKEKEKVERRITYSLDLAALRDADLVVEAIVENLDVKIPFYKQLGSLVKPTAIFGSNTSSLKIGDFAAPSGRPQQFVGLHFFNPVQLMRLVEIVRLHETEPAVFETVRGYVARIGKTAVTCQDTPGFIVNRLLVPALVQAMLMKERGEASVEDIDVAMQLGAGHPMGPLHLADYIGLDTCLFILEGWVKKYPNEPAFIVPSSLRALVQGGKLGRKSGEGFYVWEGDKKVKPAM 361          
BLAST of EWM26329.1 vs. NCBI_GenBank
Match: gi|1210523780|dbj|GAX17462.1| (3-hydroxyacyl-CoA dehydrogenase [Fistulifera solaris])

HSP 1 Score: 381.719 bits (979), Expect = 4.054e-129
Identity = 181/310 (58.39%), Postives = 230/310 (74.19%), Query Frame = 0
Query:   53 RTLAATPHYDIKKVGVVGLGLMGHGIGLVSAQAGY--EVIAVEAQAPALESGKKRIDKSLSKILSKAVEKGKMTLEAAEKEKEKVERRITYSLDLAALRDADLVVEAIVENLDVKIPFYKQLGSLVKPTAIFGSNTSSLKIGDFAAPSGRPQQFVGLHFFNPVQLMRLVEIVRLHETEPAVFETVRGYVARIGKTAVTCQDTPGFIVNRLLVPALVQAMLMKERGEASVEDIDVAMQLGAGHPMGPLHLADYIGLDTCLFILEGWVKKYPNEPAFIVPSSLRALVQGGKLGRKSGEGFYVWEGDKKVKPA 360
            R  +AT      KVGV+GLGLMGHGI  V+A +G   +VIA E +   L+SGK RI+ S+ K++SK    GKM+ E A+K  +     IT++ D+A L D D +VEA++EN+D+K   Y  LG   KP  IF SNTSSL I + A  SGRPQ FVG+HFFNPVQ+M+LVE++R  +T+PAVFE    +V  IGK AV+C DTPGFIVNRLLVPAL+QAMLM +R +AS++DID++MQLGAGHPMGPLHLADYIGLDTC FI +GWV+KYPNEPAF++P  L+++V  G LGRK+G+GFY WEGDK+  P 
Sbjct:   20 RQYSATTAVAFDKVGVIGLGLMGHGIAQVAATSGVHSQVIAFEQEQKYLDSGKARIEGSIGKLVSK----GKMSQEDADKALQS----ITFTTDMALLADTDFIVEAVIENMDLKQSLYTNLGETCKPETIFASNTSSLSITEMAQFSGRPQNFVGVHFFNPVQIMKLVEVIRTEQTDPAVFEKAYNWVGDIGKVAVSCGDTPGFIVNRLLVPALLQAMLMVDRADASIKDIDISMQLGAGHPMGPLHLADYIGLDTCYFIAKGWVEKYPNEPAFVIPKCLKSMVDAGNLGRKTGKGFYHWEGDKRGDPT 321          
BLAST of EWM26329.1 vs. NCBI_GenBank
Match: gi|1173946789|gb|OQR95289.1| (hydroxyacyl-coenzyme A dehydrogenase, mitochondrial precursor [Thraustotheca clavata])

HSP 1 Score: 379.793 bits (974), Expect = 1.889e-128
Identity = 181/305 (59.34%), Postives = 232/305 (76.07%), Query Frame = 0
Query:   53 RTLAATPHYDIKKVGVVGLGLMGHGIGLVSAQAGYEVIAVEAQAPALESGKKRIDKSLSKILSKAVEKGKMTLEAAEKEKEKVERRITYSLDLAALRDADLVVEAIVENLDVKIPFYKQLGSLVKPTAIFGSNTSSLKIGDFAAPSGRPQQFVGLHFFNPVQLMRLVEIVRLHETEPAVFETVRGYVARIGKTAVTCQDTPGFIVNRLLVPALVQAMLMKERGEASVEDIDVAMQLGAGHPMGPLHLADYIGLDTCLFILEGWVKKYPNEPAFIVPSSLRALVQGGKLGRKSGEGFYVWEGDKKV 357
            R  ++    +I +VG+VGLGLMGHGI   +A AGY+V+AV+    +L++G  RI+ SL+K+ ++ V+KG  T + A+ E   V  RI  S+    L D DLV+EAIVEN+D+K  FYK+LG +VKP+ I  SNTSSL IGDFA  SGRP Q VGLHFFNPVQLM+LVE+V   +T+P VF+  + + A +GKT V+C+DTPGFIVNRLLVP L QA+ + ERG+AS+EDID++MQLGAGHPMGP+ LADY+GLDT L ILEGWVKKYPNEP F VP SLR  V+ GKLGRK+GEG+Y W+GDK++
Sbjct:    7 RAFSSKTIPEITRVGMVGLGLMGHGIAQTAAMAGYDVVAVDMTQKSLDAGLARIEGSLNKLHARHVKKGDWTTDKAKDEFAAVMGRIHGSVTNKDLADCDLVIEAIVENVDIKKVFYKELGGIVKPSGILASNTSSLSIGDFAGSSGRPSQVVGLHFFNPVQLMKLVEVVETSQTDPKVFDISKRWAASLGKTPVSCKDTPGFIVNRLLVPNLAQALFLMERGDASMEDIDISMQLGAGHPMGPITLADYVGLDTTLSILEGWVKKYPNEPIFAVPESLRQKVKEGKLGRKTGEGYYKWDGDKRL 311          
BLAST of EWM26329.1 vs. NCBI_GenBank
Match: gi|698782533|ref|XP_009824310.1| (hypothetical protein H257_02399 [Aphanomyces astaci] >gi|574120360|gb|ETV85838.1| hypothetical protein H257_02399 [Aphanomyces astaci])

HSP 1 Score: 377.867 bits (969), Expect = 1.049e-127
Identity = 177/306 (57.84%), Postives = 233/306 (76.14%), Query Frame = 0
Query:   52 RRTLAATPHYDIKKVGVVGLGLMGHGIGLVSAQAGYEVIAVEAQAPALESGKKRIDKSLSKILSKAVEKGKMTLEAAEKEKEKVERRITYSLDLAALRDADLVVEAIVENLDVKIPFYKQLGSLVKPTAIFGSNTSSLKIGDFAAPSGRPQQFVGLHFFNPVQLMRLVEIVRLHETEPAVFETVRGYVARIGKTAVTCQDTPGFIVNRLLVPALVQAMLMKERGEASVEDIDVAMQLGAGHPMGPLHLADYIGLDTCLFILEGWVKKYPNEPAFIVPSSLRALVQGGKLGRKSGEGFYVWEGDKKV 357
            RR  ++    +I +VG+VG+GLMGHGI   +A AGY+VIAV+     L++G KRI+ SL KI ++ ++KG MT + A+     +  RI  ++D   L   DLV+EAI+E++D+K  FYK+LG +VKP+ I  SNTSSL IGDFA  SGR  + VGLHFFNPVQLM+LVE+V+   T+P VF+  + +   +GKT V+C+DTPGFIVNRLLVP LVQA+ + ERG+AS+EDID++MQLGAGHPMGP+ LADYIGLDT LFILEGWV+KYP EP+F+VP+ L+ +VQ GKLGRK+G+GFY W GDK+V
Sbjct:    6 RRAFSSKTIPEITRVGMVGMGLMGHGIAQTAATAGYDVIAVDTNQKGLDAGLKRIEGSLEKIHARQIKKGDMTEDQAKDLFASIMGRIHGTIDKKDLAPCDLVIEAIIEDMDIKKSFYKELGQIVKPSGILASNTSSLPIGDFAGSSGRADKVVGLHFFNPVQLMKLVEVVKTDLTDPNVFDVAKRWAVSVGKTPVSCKDTPGFIVNRLLVPNLVQALQLLERGDASMEDIDISMQLGAGHPMGPITLADYIGLDTILFILEGWVQKYPTEPSFVVPTILKQMVQDGKLGRKAGQGFYKWNGDKRV 311          
BLAST of EWM26329.1 vs. NCBI_GenBank
Match: gi|673020178|ref|XP_008864050.1| (hypothetical protein H310_02343 [Aphanomyces invadans] >gi|574480964|gb|ETW07957.1| hypothetical protein H310_02343 [Aphanomyces invadans])

HSP 1 Score: 376.326 bits (965), Expect = 4.027e-127
Identity = 176/305 (57.70%), Postives = 233/305 (76.39%), Query Frame = 0
Query:   52 RRTLAATPHYDIKKVGVVGLGLMGHGIGLVSAQAGYEVIAVEAQAPALESGKKRIDKSLSKILSKAVEKGKMTLEAAEKEKEKVERRITYSLDLAALRDADLVVEAIVENLDVKIPFYKQLGSLVKPTAIFGSNTSSLKIGDFAAPSGRPQQFVGLHFFNPVQLMRLVEIVRLHETEPAVFETVRGYVARIGKTAVTCQDTPGFIVNRLLVPALVQAMLMKERGEASVEDIDVAMQLGAGHPMGPLHLADYIGLDTCLFILEGWVKKYPNEPAFIVPSSLRALVQGGKLGRKSGEGFYVWEGDKK 356
            RR  ++    +I +VG+VG+GLMGHGI   +A AGY+VIAV++    L++G KRI+ SL K+ ++ ++KG++T E A+     +  RI  ++D   L   DLV+EAI+E+ D+K  FYK+LG +V+P+ I  SNTSSL IGDFA  SGR  + VGLHFFNPVQLM+LVE+V+   T+P VF+  + +   +GKT V+C+DTPGFIVNRLLVP LVQA+ + ERG+AS+EDID++MQLGAGHPMGP+ LADYIGLDT LFILEGWVKKYPNEP+F+VPS L+ +V  GKLGRK+G+GFY W GDK+
Sbjct:    7 RRAFSSKMVPEITRVGMVGMGLMGHGIAQTAAMAGYDVIAVDSNQKGLDAGLKRIEGSLEKLHARQIKKGELTDEQAKDSFASIMGRIHGTIDKKELAPCDLVIEAIIEDTDIKKSFYKELGQIVQPSGILASNTSSLPIGDFAGSSGRADKVVGLHFFNPVQLMKLVEVVKTDVTDPNVFDLAKRWTLSVGKTPVSCKDTPGFIVNRLLVPNLVQALQLLERGDASMEDIDISMQLGAGHPMGPITLADYIGLDTILFILEGWVKKYPNEPSFVVPSILKQMVNDGKLGRKTGQGFYKWNGDKR 311          
BLAST of EWM26329.1 vs. NCBI_GenBank
Match: gi|1173941167|gb|OQR90401.1| (hydroxyacyl-coenzyme A dehydrogenase, mitochondrial precursor [Achlya hypogyna])

HSP 1 Score: 376.326 bits (965), Expect = 4.108e-127
Identity = 179/304 (58.88%), Postives = 230/304 (75.66%), Query Frame = 0
Query:   53 RTLAATPHYDIKKVGVVGLGLMGHGIGLVSAQAGYEVIAVEAQAPALESGKKRIDKSLSKILSKAVEKGKMTLEAAEKEKEKVERRITYSLDLAALRDADLVVEAIVENLDVKIPFYKQLGSLVKPTAIFGSNTSSLKIGDFAAPSGRPQQFVGLHFFNPVQLMRLVEIVRLHETEPAVFETVRGYVARIGKTAVTCQDTPGFIVNRLLVPALVQAMLMKERGEASVEDIDVAMQLGAGHPMGPLHLADYIGLDTCLFILEGWVKKYPNEPAFIVPSSLRALVQGGKLGRKSGEGFYVWEGDKK 356
            R+ +     +I +VG+VGLGLMGHGI   +A AGY+V+A++    +L++G  RI+ SL KI ++ V+KG+ T E A+ E   V  RI  S+    L + DLV+EAI+E++D+K  FYK+LG +VKP+ I  SNTSSL IGDFA  SGRP++ VGLHFFNPVQLM+LVE++R   T+ AVF+  + + A +GKT V+C+DTPGFIVNRLLVP L QA+ M ERGEA++EDID++MQLGAGHPMGPL LADY+GLDT LFIL+GW KKYPNEP F VP  LR  V+ GKLGRK+GEGFY W GDK+
Sbjct:    7 RSFSTKTIPEITRVGMVGLGLMGHGIAQTAAMAGYDVVALDVTQKSLDAGLARIEGSLEKIGARHVKKGEWTAEQAKDEFAAVMGRINGSIVKKDLAECDLVIEAIIEDVDIKKTFYKELGGIVKPSGILASNTSSLSIGDFAGSSGRPEKVVGLHFFNPVQLMKLVEVIRTDATDAAVFDVSKRWAASLGKTPVSCKDTPGFIVNRLLVPNLAQALFMLERGEATMEDIDISMQLGAGHPMGPLTLADYVGLDTILFILDGWTKKYPNEPVFQVPEILRQKVKEGKLGRKTGEGFYKWNGDKR 310          
BLAST of EWM26329.1 vs. NCBI_GenBank
Match: gi|669160730|ref|XP_008615927.1| (hypothetical protein SDRG_11656 [Saprolegnia diclina VS20] >gi|530732359|gb|EQC30601.1| hypothetical protein SDRG_11656 [Saprolegnia diclina VS20])

HSP 1 Score: 375.555 bits (963), Expect = 7.768e-127
Identity = 180/304 (59.21%), Postives = 232/304 (76.32%), Query Frame = 0
Query:   53 RTLAATPHYDIKKVGVVGLGLMGHGIGLVSAQAGYEVIAVEAQAPALESGKKRIDKSLSKILSKAVEKGKMTLEAAEKEKEKVERRITYSLDLAALRDADLVVEAIVENLDVKIPFYKQLGSLVKPTAIFGSNTSSLKIGDFAAPSGRPQQFVGLHFFNPVQLMRLVEIVRLHETEPAVFETVRGYVARIGKTAVTCQDTPGFIVNRLLVPALVQAMLMKERGEASVEDIDVAMQLGAGHPMGPLHLADYIGLDTCLFILEGWVKKYPNEPAFIVPSSLRALVQGGKLGRKSGEGFYVWEGDKK 356
            R++A     +I +VG+VGLGLMGHGI   +A AGY+V+A++    +L++G  RI+ SL KI ++ V+KG+ T + A+ E   V  RI  S+    L + DLV+EAI+E++++K  FYK+LG +VKP+ I  SNTSSL IGDFA  SGRP Q VGLHFFNPVQ+M+LVE+V+  ET+PAVF+  + + A +GKT V+C+DTPGFIVNRLLVP L QA+ + ERG+AS+EDIDV+MQLGAGHPMGP+ LADY+GLDT LFILEGW  KYPNEP F VPS LR  V+ GKLGRK+GEGFY W GDK+
Sbjct:    9 RSMATKTIPEITRVGMVGLGLMGHGIAQTAAMAGYDVVALDVTQKSLDAGLARIEGSLEKIGARHVKKGEWTADQAKDEFAAVMGRIHGSVVKKDLAECDLVIEAIIEDVEIKKTFYKELGGIVKPSGILASNTSSLSIGDFAGSSGRPSQVVGLHFFNPVQVMKLVEVVQTKETDPAVFDVSKRWAASLGKTPVSCKDTPGFIVNRLLVPNLAQALFLLERGDASMEDIDVSMQLGAGHPMGPITLADYVGLDTILFILEGWTTKYPNEPVFEVPSLLRQKVKEGKLGRKTGEGFYKWNGDKR 312          
BLAST of EWM26329.1 vs. NCBI_GenBank
Match: gi|298706676|emb|CBJ29605.1| (hydroxyacyl-Coenzyme A dehydrogenase [Ectocarpus siliculosus])

HSP 1 Score: 375.555 bits (963), Expect = 1.586e-126
Identity = 181/316 (57.28%), Postives = 227/316 (71.84%), Query Frame = 0
Query:   48 HVQQRRTLAATPHYDIKKVGVVGLGLMGHGIGLVSAQAG---YEVIAVEAQAPALESGKKRIDKSLSKILSKAVEKGKMTLEAAEKEKEKVERRITYSLDLAALRDADLVVEAIVENLDVKIPFYKQLGSLVKPTAIFGSNTSSLKIGDFAAPSGRPQQFVGLHFFNPVQLMRLVEIVRLHETEPAVFETVRGYVARIGKTAVTCQDTPGFIVNRLLVPALVQAMLMKERGEASVEDIDVAMQLGAGHPMGPLHLADYIGLDTCLFILEGWVKKYPNEPAFIVPSSLRALVQGGKLGRKSGEGFYVWEGDKKVKPA 360
            H   RR   A     IK+VGVVGLGLMGHG+  V+A A    Y V+AV+    ++++GKKRID+SLSK+L + V+KG +T   A  +KE +  RI+Y+ D++AL D DLVVEAI EN ++K   +K L  + +P  I  SNTSSL I + A  SGRP   VGLHFFNPVQLM+LVE+VR   T+P VFE  + +   +GK  V+C DTPGFIVNRLLVP L Q MLM +RG+ SVEDID +M+LGAGHPMGPL LADY+GLD CL IL+GWV+KYP+EP+F+VP  LR  V  GKLGRKSGEGFY+W+GDK+   A
Sbjct:   12 HGASRRWQLARELSTIKQVGVVGLGLMGHGVVQVTAMASSPEYTVVAVDGSKDSIDAGKKRIDQSLSKMLDRKVKKGVLTEGDAAAQKEGISSRISYASDVSALADCDLVVEAITENPEIKFSLFKDLARVTRPDCILASNTSSLSIKEMAVASGRPSHVVGLHFFNPVQLMKLVEVVRCDVTDPVVFEECKSWAQTVGKHPVSCVDTPGFIVNRLLVPGLAQGMLMYDRGDGSVEDIDKSMELGAGHPMGPLTLADYVGLDICLSILDGWVQKYPDEPSFVVPECLREKVAAGKLGRKSGEGFYLWDGDKRTTVA 327          
BLAST of EWM26329.1 vs. NCBI_GenBank
Match: gi|813114432|ref|XP_012195374.1| (hypothetical protein SPRG_01616 [Saprolegnia parasitica CBS 223.65] >gi|641539867|gb|KDO33662.1| hypothetical protein SPRG_01616 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 374.785 bits (961), Expect = 1.994e-126
Identity = 179/304 (58.88%), Postives = 231/304 (75.99%), Query Frame = 0
Query:   53 RTLAATPHYDIKKVGVVGLGLMGHGIGLVSAQAGYEVIAVEAQAPALESGKKRIDKSLSKILSKAVEKGKMTLEAAEKEKEKVERRITYSLDLAALRDADLVVEAIVENLDVKIPFYKQLGSLVKPTAIFGSNTSSLKIGDFAAPSGRPQQFVGLHFFNPVQLMRLVEIVRLHETEPAVFETVRGYVARIGKTAVTCQDTPGFIVNRLLVPALVQAMLMKERGEASVEDIDVAMQLGAGHPMGPLHLADYIGLDTCLFILEGWVKKYPNEPAFIVPSSLRALVQGGKLGRKSGEGFYVWEGDKK 356
            R++A     +I +VG+VGLGLMGHGI   +A AGY+V+A++    +L++G  RI+ SL KI ++ V+KG+ T + A+ E   V  RI  S+    L + DLV+EAI+E++++K  FYK+LG +VKP+ I  SNTSSL IGDFA  SGRP Q VGLHFFNPVQ+M+LVE+V+  ET+P VF+  + + A +GKT V+C+DTPGFIVNRLLVP L QA+ + ERG+AS+EDIDV+MQLGAGHPMGP+ LADY+GLDT LFILEGW  KYPNEP F VPS LR  V+ GKLGRK+GEGFY W GDK+
Sbjct:   11 RSMATKTIPEITRVGMVGLGLMGHGIAQTAAMAGYDVVALDVTQKSLDAGLARIEGSLEKIGARHVKKGEWTADQAKDEFAAVMGRIHGSVVKKDLAECDLVIEAIIEDVEIKKTFYKELGGIVKPSGILASNTSSLSIGDFAGSSGRPSQVVGLHFFNPVQVMKLVEVVQTKETDPTVFDVSKRWAASLGKTPVSCKDTPGFIVNRLLVPNLAQALFLLERGDASMEDIDVSMQLGAGHPMGPITLADYVGLDTILFILEGWTTKYPNEPVFEVPSLLRQKVKEGKLGRKTGEGFYKWNGDKR 314          
BLAST of EWM26329.1 vs. NCBI_GenBank
Match: gi|1210527341|dbj|GAX13976.1| (3-hydroxyacyl-CoA dehydrogenase [Fistulifera solaris])

HSP 1 Score: 373.244 bits (957), Expect = 1.086e-125
Identity = 177/310 (57.10%), Postives = 227/310 (73.23%), Query Frame = 0
Query:   53 RTLAATPHYDIKKVGVVGLGLMGHGIGLVSAQAGY--EVIAVEAQAPALESGKKRIDKSLSKILSKAVEKGKMTLEAAEKEKEKVERRITYSLDLAALRDADLVVEAIVENLDVKIPFYKQLGSLVKPTAIFGSNTSSLKIGDFAAPSGRPQQFVGLHFFNPVQLMRLVEIVRLHETEPAVFETVRGYVARIGKTAVTCQDTPGFIVNRLLVPALVQAMLMKERGEASVEDIDVAMQLGAGHPMGPLHLADYIGLDTCLFILEGWVKKYPNEPAFIVPSSLRALVQGGKLGRKSGEGFYVWEGDKKVKPA 360
            R  +AT      KVGV+GLGLMGHGI  V+A +G   +VIA E +   L+SGK RI  S+ K++SK    GKM+ E A+K  +     IT++ D+A L D D ++EA++EN+D+K   Y  LG   KP  IF SNTSSL I + A  SGRPQ FVG+HFFNPVQ+M+LVE++R  +T+PAVFE    +V  IGK AV+C DTPGFIVNRLLVPAL+QAMLM +R +AS++DID++MQLGAGHPMGPLHLADYIGLDTC +I +GWV+KYPNE AF++P  L+ +V  G LGRK+G+GFY W+GDK+  P 
Sbjct:   20 RQYSATTAVAFDKVGVIGLGLMGHGIAQVAATSGVHSQVIAFEQEQKYLDSGKARIQGSIGKLVSK----GKMSQEDADKALQS----ITFTTDMALLADTDFILEAVIENMDLKQSLYTNLGETCKPETIFASNTSSLSITEMAQFSGRPQNFVGVHFFNPVQIMKLVEVIRTKQTDPAVFEKAYNWVGDIGKVAVSCGDTPGFIVNRLLVPALLQAMLMMDRTDASIKDIDISMQLGAGHPMGPLHLADYIGLDTCYYIAKGWVEKYPNESAFVIPKCLKIMVDAGNLGRKTGKGFYHWDGDKRGDPT 321          
The following BLAST results are available for this feature:
BLAST of EWM26329.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108336|gb|EWM26329.1|0.000e+0100.00hydroxyacyl-coenzyme a mitochondrial precursor [Na... [more]
gi|1210523780|dbj|GAX17462.1|4.054e-12958.393-hydroxyacyl-CoA dehydrogenase [Fistulifera solar... [more]
gi|1173946789|gb|OQR95289.1|1.889e-12859.34hydroxyacyl-coenzyme A dehydrogenase, mitochondria... [more]
gi|698782533|ref|XP_009824310.1|1.049e-12757.84hypothetical protein H257_02399 [Aphanomyces astac... [more]
gi|673020178|ref|XP_008864050.1|4.027e-12757.70hypothetical protein H310_02343 [Aphanomyces invad... [more]
gi|1173941167|gb|OQR90401.1|4.108e-12758.88hydroxyacyl-coenzyme A dehydrogenase, mitochondria... [more]
gi|669160730|ref|XP_008615927.1|7.768e-12759.21hypothetical protein SDRG_11656 [Saprolegnia dicli... [more]
gi|298706676|emb|CBJ29605.1|1.586e-12657.28hydroxyacyl-Coenzyme A dehydrogenase [Ectocarpus s... [more]
gi|813114432|ref|XP_012195374.1|1.994e-12658.88hypothetical protein SPRG_01616 [Saprolegnia paras... [more]
gi|1210527341|dbj|GAX13976.1|1.086e-12557.103-hydroxyacyl-CoA dehydrogenase [Fistulifera solar... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4352rna4352Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications