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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100078g19.7007.mrna |
| Orig protein id | gnl|cribi|Naga_100078g19.7007 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:357849..359998 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4350 ID=rna4350|Name=rna4350|organism=Nannochloropsis gaditana|type=mRNA|length=283bp
ATGACACAGCCCATTATCAAGCAACATGATATGGCTTCTGAAATGTTCTC
CGAGGCGGTAGAGCTTATCACCATGGCCGTAGATAAGCATGCCATCTCCA
AGAACTACGAAGCAGCCGCCGGTATGATTAAGATTACGTTTGATAAAAAA
TTTGGTAACAACTGGCACGTTATCATTGGTGAAGGCTTCGGCTTCGAAAT
AAGTTATCAGCAGCAACATCTTCTTTATGTCTTTATCGGGACATTAGGGG
TGTTATGTTACAAAATGTGACTTCGGCGCAAAT back to topprotein sequence of rna4350 >rna4350-protein ID=rna4350-protein|Name=rna4350|organism=Nannochloropsis gaditana|type=polypeptide|length=430bp
MSALDSNALRKGKWTSEEEEFTQRMIEYFNTGLLPLPNGTTLRAYLAEKL
KCDPMRITKKFTGAACLGRRVYRPSISSSSTRAEPSPSAVASAKSHLMEL
EARMWQRLERRRENKDYMGCLEYDAGGYDSSYLVSTPAIDALLRQSRNDP
HFWDEDVSSTHSSASERRGEEEEEEEEEEEEEEEEGEENMAAVSCMPANF
LKTSRAIKTEHQGLGSAWTDQYEGIDPLLPKYSTSSVSSCSSSTTGCSSS
GSSESACCSCSFSDGDTADADVSVSLGLELQTCGSVRGGSGSLSRPMKKR
ARMAASTGSFTDGEYPEEEEEAVEEGLRSGWMDGRRLCWVAGKAWEGSLE
EGEEADAGTLMNVVSQLHKSGSHEDLVHFVCGVNQKMEGGAENAGTSKGR
GLLRRGPGETIDGYRGGTAGNKHDIFLMKK back to topmRNA from alignment at CM002463.1:357849..359998+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4350 ID=rna4350|Name=rna4350|organism=Nannochloropsis gaditana|type=mRNA|length=2150bp|location=Sequence derived from alignment at CM002463.1:357849..359998+ (Nannochloropsis gaditana)
CTCAGAACAATACACGCATTACTAAAAACAATGTCAGCTCTTGATAGCAA
TGCCCTCCGAAAGGGTAAATGGACGGTAAGTGTGCAATAGGTGTGCGCAC
GTAGCAGCAAGGGATAGGGTGGCCTAGTCAGTCTCCTTTAAAGGAATTGG
CTACGTGAATCACTAACATATTGCGACGCGCACCCCTTCACTTTTGAATT
ATAgagcgaagaagaagagttCACACAGCGAATGATTGAATATTTCAACA
CgggccttcttcctcttccgaaCGGTACCACGTTGCGCGCCTATTTGGCA
GAGAAATTGAAATGGTACGTCAGACAGACAGAGTGCTGTTTTCTGGTATG
CATTGCGAGAGACTACCACCGCCCTGGGACTCTTTTTCCGAATGCTTTGA
ATGTATTACCAAGGATCTTGCATGTTGAATTGCTTCCGCGCGAATCGGTT
GTCCGCGTACACGGCGTGCAGGCGTGAGCTTGCAAGGCGACATGAGTAGT
CCGGCCCCCTGGCTTCCGCCATCGTCAAGCGGCGCCCACCTTTTTCTGTC
GCCGCTTGCTCTTGATATAATTACCGAGCATAATATTCTAACATGTTCAG
ATGACGTTATTGATTTTACCCGCTCGGATGAGTCTTCTCTTATCAGGCGG
CACGCGAATTCACGGCATTGCCCCCTGCATTGTCCCTCACGAAGTCCGCG
CGTTTGTAccagcctttctccccttgctccACTGAACCTCTTATCGCAAg
gcttcctccactctcccccacctcccgaCAGTGACCCTATGCGCATCACG
AAGAAGTTCACGGGTGCCGCCTGCCTGGGAAGGCGGGTCTATCGGCCCTC
CATTTCAAGCTCATCCACGCGCGCAGAACCTTCTCCGAGTGCCGTGGCCT
CTGCTAAGAGCCACCTGATGGAATTGGAGGCACGAATGTGGCAGCGACTG
GAGCGCCGACGGGAGAACAAGGACTACATGGGATGCTTGGAGTATGATGC
GGGCGGGTATGACAGTTCTTACCTGgtgtccacgcccgccatcGACGCTT
TACTCAGGCAAAGTCGGAACGACCCACACTtctgggacgaggacgtgtcC
TCGACGCACTCGTCAGCAtcggagaggcggggagaagaagaagaagagga
agaggaggaggaggaggaggaggaggaggagggcgaggagaatATGGCCG
CAGTTTCGTGCATGCCTGCAAATTTTCTGAAGACGTCGCGAGCGATAAAG
ACTGAACACCAGGGGCTGGGCTCTGCTTGGACCGATCAATACGAGGGAAT
CGACCCTCTCTTGCCCAAGtactccacctcctcggtctcctcctgctcct
cctccacgaccggGTGCAGCtccagcggcagcagcgagaGTGCCTGCTGT
TCGTGCTCTTTCTCGGACGGTGATACAGCCGATGCCGACGTCAGCGTGTC
TCTGGGCCTCGAACTTCAGACGTGCGGTTCGGTCCgtggaggcagtggga
gTCTCTCCCGACCCATGAAGAAACGGGCACGCATGGCTGCGTCCACGGGC
TCGTTCACGGACGGagaatacccggaggaggaggaggaggcggtggagga
gggattgCGGAGTGGGTGGATGGACGGGCGGCGGCTCTGTtgggtggcgg
ggaaggcatgggaagggagcctggaggagggggaagaggcggatgCGGGC
ACATTGATGAACGTGGTGTCTCAGCTGCACAAGAGTGGGAGCCACGAGGA
CCTGGTGCACTTCGTTTGCGGCGTGAAccagaagatggaggggggcgcgg
aGAACGCTGGAACGTCCAAGGGCAGGGGCTTGCTCCGGTAGAAATAAAAG
CGGAGGGGCGGTATGGTGgagcaggcaaggagagaggcccTCTCAAAGCA
CCGGTGTTGTGGGCTCCGAGGCTTGGTCGTAGTATGGAAATGAATAGGCC
ACATTTGACATCCTTTTTTTTTGGAAGTTTATGCTGTACGTCGATGCGTA
AGCATGCAAATGTAGAATTTTAGTAAAAGCCACCTGACTAACTTGCTCCT
GTTTGCGAGGAGCCATAGCCGAGGGCCTGGCGAGACCATCGATGGATACC
GAGGTGGGACCGCAGGCAATAAGCATGATATCTTTTTGATGAAGAAATGA
back to topCoding sequence (CDS) from alignment at CM002463.1:357849..359998+ >rna4350 ID=rna4350|Name=rna4350|organism=Nannochloropsis gaditana|type=CDS|length=5172bp|location=Sequence derived from alignment at CM002463.1:357849..359998+ (Nannochloropsis gaditana)
ATGTCAGCTCTTGATAGCAATGCCCTCCGAAAGGGTAAATGGACGagcga
agaagaagagttCACACAGCGAATGATTGAATATTTCAACACgggccttc
ttcctcttccgaaCGGTACCACGTTGCGCGCCTATTTGGCAGAGAAATTG
AAATGTGACCCTATGCGCATCACGAAGAAGTTCACGGGTGCCGCCTGCCT
GGGAAGGCGGGTCTATCGGCCCTCCATTTCAAGCTCATCCACGCGCGCAG
AACCTTCTCCGAGTGCCGTGGCCTCTGCTAAGAGCCACCTGATGGAATTG
GAGGCACGAATGTGGCAGCGACTGGAGCGCCGACGGGAGAACAAGGACTA
CATGGGATGCTTGGAGTATGATGCGGGCGGGTATGACAGTTCTTACCTGg
tgtccacgcccgccatcGACGCTTTACTCAGGCAAAGTCGGAACGACCCA
CACTtctgggacgaggacgtgtcCTCGACGCACTCGTCAGCAtcggagag
gcggggagaagaagaagaagaggaagaggaggaggaggaggaggaggagg
aggagggcgaggagaatATGGCCGCAGTTTCGTGCATGCCTGCAAATTTT
CTGAAGACGTCGCGAGCGATAAAGACTGAACACCAGGGGCTGGGCTCTGC
TTGGACCGATCAATACGAGGGAATCGACCCTCTCTTGCCCAAGtactcca
cctcctcggtctcctcctgctcctcctccacgaccggGTGCAGCtccagc
ggcagcagcgagaGTGCCTGCTGTTCGTGCTCTTTCTCGGACGGTGATAC
AGCCGATGCCGACGTCAGCGTGTCTCTGGGCCTCGAACTTCAGACGTGCG
GTTCGGTCCgtggaggcagtgggagTCTCTCCCGACCCATGAAGAAACGG
GCACGCATGGCTGCGTCCACGGGCTCGTTCACGGACGGagaatacccgga
ggaggaggaggaggcggtggaggagggattgCGGAGTGGGTGGATGGACG
GGCGGCGGCTCTGTtgggtggcggggaaggcatgggaagggagcctggag
gagggggaagaggcggatgCGGGCACATTGATGAACGTGGTGTCTCAGCT
GCACAAGAGTGGGAGCCACGAGGACCTGGTGCACTTCGTTTGCGGCGTGA
AccagaagatggaggggggcgcggaGAACGCTGGAACGTCCAAGGGCAGG
GGCTTGCTCCGCCGAGGGCCTGGCGAGACCATCGATGGATACCGAGGTGG
GACCGCAGGCAATAAGCATGATATCTTTTTGATGAAGAAATGAATGTCAG
CTCTTGATAGCAATGCCCTCCGAAAGGGTAAATGGACGagcgaagaagaa
gagttCACACAGCGAATGATTGAATATTTCAACACgggccttcttcctct
tccgaaCGGTACCACGTTGCGCGCCTATTTGGCAGAGAAATTGAAATGTG
ACCCTATGCGCATCACGAAGAAGTTCACGGGTGCCGCCTGCCTGGGAAGG
CGGGTCTATCGGCCCTCCATTTCAAGCTCATCCACGCGCGCAGAACCTTC
TCCGAGTGCCGTGGCCTCTGCTAAGAGCCACCTGATGGAATTGGAGGCAC
GAATGTGGCAGCGACTGGAGCGCCGACGGGAGAACAAGGACTACATGGGA
TGCTTGGAGTATGATGCGGGCGGGTATGACAGTTCTTACCTGgtgtccac
gcccgccatcGACGCTTTACTCAGGCAAAGTCGGAACGACCCACACTtct
gggacgaggacgtgtcCTCGACGCACTCGTCAGCAtcggagaggcgggga
gaagaagaagaagaggaagaggaggaggaggaggaggaggaggaggaggg
cgaggagaatATGGCCGCAGTTTCGTGCATGCCTGCAAATTTTCTGAAGA
CGTCGCGAGCGATAAAGACTGAACACCAGGGGCTGGGCTCTGCTTGGACC
GATCAATACGAGGGAATCGACCCTCTCTTGCCCAAGtactccacctcctc
ggtctcctcctgctcctcctccacgaccggGTGCAGCtccagcggcagca
gcgagaGTGCCTGCTGTTCGTGCTCTTTCTCGGACGGTGATACAGCCGAT
GCCGACGTCAGCGTGTCTCTGGGCCTCGAACTTCAGACGTGCGGTTCGGT
CCgtggaggcagtgggagTCTCTCCCGACCCATGAAGAAACGGGCACGCA
TGGCTGCGTCCACGGGCTCGTTCACGGACGGagaatacccggaggaggag
gaggaggcggtggaggagggattgCGGAGTGGGTGGATGGACGGGCGGCG
GCTCTGTtgggtggcggggaaggcatgggaagggagcctggaggaggggg
aagaggcggatgCGGGCACATTGATGAACGTGGTGTCTCAGCTGCACAAG
AGTGGGAGCCACGAGGACCTGGTGCACTTCGTTTGCGGCGTGAAccagaa
gatggaggggggcgcggaGAACGCTGGAACGTCCAAGGGCAGGGGCTTGC
TCCGCCGAGGGCCTGGCGAGACCATCGATGGATACCGAGGTGGGACCGCA
GGCAATAAGCATGATATCTTTTTGATGAAGAAATGAATGTCAGCTCTTGA
TAGCAATGCCCTCCGAAAGGGTAAATGGACGagcgaagaagaagagttCA
CACAGCGAATGATTGAATATTTCAACACgggccttcttcctcttccgaaC
GGTACCACGTTGCGCGCCTATTTGGCAGAGAAATTGAAATGTGACCCTAT
GCGCATCACGAAGAAGTTCACGGGTGCCGCCTGCCTGGGAAGGCGGGTCT
ATCGGCCCTCCATTTCAAGCTCATCCACGCGCGCAGAACCTTCTCCGAGT
GCCGTGGCCTCTGCTAAGAGCCACCTGATGGAATTGGAGGCACGAATGTG
GCAGCGACTGGAGCGCCGACGGGAGAACAAGGACTACATGGGATGCTTGG
AGTATGATGCGGGCGGGTATGACAGTTCTTACCTGgtgtccacgcccgcc
atcGACGCTTTACTCAGGCAAAGTCGGAACGACCCACACTtctgggacga
ggacgtgtcCTCGACGCACTCGTCAGCAtcggagaggcggggagaagaag
aagaagaggaagaggaggaggaggaggaggaggaggaggagggcgaggag
aatATGGCCGCAGTTTCGTGCATGCCTGCAAATTTTCTGAAGACGTCGCG
AGCGATAAAGACTGAACACCAGGGGCTGGGCTCTGCTTGGACCGATCAAT
ACGAGGGAATCGACCCTCTCTTGCCCAAGtactccacctcctcggtctcc
tcctgctcctcctccacgaccggGTGCAGCtccagcggcagcagcgagaG
TGCCTGCTGTTCGTGCTCTTTCTCGGACGGTGATACAGCCGATGCCGACG
TCAGCGTGTCTCTGGGCCTCGAACTTCAGACGTGCGGTTCGGTCCgtgga
ggcagtgggagTCTCTCCCGACCCATGAAGAAACGGGCACGCATGGCTGC
GTCCACGGGCTCGTTCACGGACGGagaatacccggaggaggaggaggagg
cggtggaggagggattgCGGAGTGGGTGGATGGACGGGCGGCGGCTCTGT
tgggtggcggggaaggcatgggaagggagcctggaggagggggaagaggc
ggatgCGGGCACATTGATGAACGTGGTGTCTCAGCTGCACAAGAGTGGGA
GCCACGAGGACCTGGTGCACTTCGTTTGCGGCGTGAAccagaagatggag
gggggcgcggaGAACGCTGGAACGTCCAAGGGCAGGGGCTTGCTCCGCCG
AGGGCCTGGCGAGACCATCGATGGATACCGAGGTGGGACCGCAGGCAATA
AGCATGATATCTTTTTGATGAAGAAATGAATGTCAGCTCTTGATAGCAAT
GCCCTCCGAAAGGGTAAATGGACGagcgaagaagaagagttCACACAGCG
AATGATTGAATATTTCAACACgggccttcttcctcttccgaaCGGTACCA
CGTTGCGCGCCTATTTGGCAGAGAAATTGAAATGTGACCCTATGCGCATC
ACGAAGAAGTTCACGGGTGCCGCCTGCCTGGGAAGGCGGGTCTATCGGCC
CTCCATTTCAAGCTCATCCACGCGCGCAGAACCTTCTCCGAGTGCCGTGG
CCTCTGCTAAGAGCCACCTGATGGAATTGGAGGCACGAATGTGGCAGCGA
CTGGAGCGCCGACGGGAGAACAAGGACTACATGGGATGCTTGGAGTATGA
TGCGGGCGGGTATGACAGTTCTTACCTGgtgtccacgcccgccatcGACG
CTTTACTCAGGCAAAGTCGGAACGACCCACACTtctgggacgaggacgtg
tcCTCGACGCACTCGTCAGCAtcggagaggcggggagaagaagaagaaga
ggaagaggaggaggaggaggaggaggaggaggagggcgaggagaatATGG
CCGCAGTTTCGTGCATGCCTGCAAATTTTCTGAAGACGTCGCGAGCGATA
AAGACTGAACACCAGGGGCTGGGCTCTGCTTGGACCGATCAATACGAGGG
AATCGACCCTCTCTTGCCCAAGtactccacctcctcggtctcctcctgct
cctcctccacgaccggGTGCAGCtccagcggcagcagcgagaGTGCCTGC
TGTTCGTGCTCTTTCTCGGACGGTGATACAGCCGATGCCGACGTCAGCGT
GTCTCTGGGCCTCGAACTTCAGACGTGCGGTTCGGTCCgtggaggcagtg
ggagTCTCTCCCGACCCATGAAGAAACGGGCACGCATGGCTGCGTCCACG
GGCTCGTTCACGGACGGagaatacccggaggaggaggaggaggcggtgga
ggagggattgCGGAGTGGGTGGATGGACGGGCGGCGGCTCTGTtgggtgg
cggggaaggcatgggaagggagcctggaggagggggaagaggcggatgCG
GGCACATTGATGAACGTGGTGTCTCAGCTGCACAAGAGTGGGAGCCACGA
GGACCTGGTGCACTTCGTTTGCGGCGTGAAccagaagatggaggggggcg
cggaGAACGCTGGAACGTCCAAGGGCAGGGGCTTGCTCCGCCGAGGGCCT
GGCGAGACCATCGATGGATACCGAGGTGGGACCGCAGGCAATAAGCATGA
TATCTTTTTGATGAAGAAATGA back to top
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