EWM26332.1, cds4340 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM26332.1 vs. NCBI_GenBank
Match: gi|585108339|gb|EWM26332.1| (hypothetical protein Naga_100078g19 [Nannochloropsis gaditana]) HSP 1 Score: 878.241 bits (2268), Expect = 0.000e+0 Identity = 430/430 (100.00%), Postives = 430/430 (100.00%), Query Frame = 0
Query: 1 MSALDSNALRKGKWTSEEEEFTQRMIEYFNTGLLPLPNGTTLRAYLAEKLKCDPMRITKKFTGAACLGRRVYRPSISSSSTRAEPSPSAVASAKSHLMELEARMWQRLERRRENKDYMGCLEYDAGGYDSSYLVSTPAIDALLRQSRNDPHFWDEDVSSTHSSASERRGEEEEEEEEEEEEEEEEGEENMAAVSCMPANFLKTSRAIKTEHQGLGSAWTDQYEGIDPLLPKYSTSSVSSCSSSTTGCSSSGSSESACCSCSFSDGDTADADVSVSLGLELQTCGSVRGGSGSLSRPMKKRARMAASTGSFTDGEYPEEEEEAVEEGLRSGWMDGRRLCWVAGKAWEGSLEEGEEADAGTLMNVVSQLHKSGSHEDLVHFVCGVNQKMEGGAENAGTSKGRGLLRRGPGETIDGYRGGTAGNKHDIFLMKK 430
MSALDSNALRKGKWTSEEEEFTQRMIEYFNTGLLPLPNGTTLRAYLAEKLKCDPMRITKKFTGAACLGRRVYRPSISSSSTRAEPSPSAVASAKSHLMELEARMWQRLERRRENKDYMGCLEYDAGGYDSSYLVSTPAIDALLRQSRNDPHFWDEDVSSTHSSASERRGEEEEEEEEEEEEEEEEGEENMAAVSCMPANFLKTSRAIKTEHQGLGSAWTDQYEGIDPLLPKYSTSSVSSCSSSTTGCSSSGSSESACCSCSFSDGDTADADVSVSLGLELQTCGSVRGGSGSLSRPMKKRARMAASTGSFTDGEYPEEEEEAVEEGLRSGWMDGRRLCWVAGKAWEGSLEEGEEADAGTLMNVVSQLHKSGSHEDLVHFVCGVNQKMEGGAENAGTSKGRGLLRRGPGETIDGYRGGTAGNKHDIFLMKK
Sbjct: 1 MSALDSNALRKGKWTSEEEEFTQRMIEYFNTGLLPLPNGTTLRAYLAEKLKCDPMRITKKFTGAACLGRRVYRPSISSSSTRAEPSPSAVASAKSHLMELEARMWQRLERRRENKDYMGCLEYDAGGYDSSYLVSTPAIDALLRQSRNDPHFWDEDVSSTHSSASERRGEEEEEEEEEEEEEEEEGEENMAAVSCMPANFLKTSRAIKTEHQGLGSAWTDQYEGIDPLLPKYSTSSVSSCSSSTTGCSSSGSSESACCSCSFSDGDTADADVSVSLGLELQTCGSVRGGSGSLSRPMKKRARMAASTGSFTDGEYPEEEEEAVEEGLRSGWMDGRRLCWVAGKAWEGSLEEGEEADAGTLMNVVSQLHKSGSHEDLVHFVCGVNQKMEGGAENAGTSKGRGLLRRGPGETIDGYRGGTAGNKHDIFLMKK 430
BLAST of EWM26332.1 vs. NCBI_GenBank
Match: gi|298707207|emb|CBJ29954.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 124.405 bits (311), Expect = 8.089e-31 Identity = 66/122 (54.10%), Postives = 79/122 (64.75%), Query Frame = 0
Query: 7 NAL-RKGKWTSEEEEFTQRMIEYFNTGLLPLPNGTTLRAYLAEKLKCDPMRITKKFTGAACLGRRVYRPSISSSSTRAEPSPSAVASAKSHLMELEARMWQRLERRRENKDYMGCLEYDAGG 127
NA+ RKGKWTSEEE T R+I YF+ G+L LP+GTTLRAYLA+KL CDPMRITKKFTG CLG+RVY S R + A L ELEAR RLER +E + + +E+ G
Sbjct: 5 NAMSRKGKWTSEEEALTARIIHYFSLGVLQLPDGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVY-----HSCERTTATYEVAKQAVEELAELEARFQARLERNKEKRTGILGIEHTKTG 121
BLAST of EWM26332.1 vs. NCBI_GenBank
Match: gi|676400387|ref|XP_009043471.1| (hypothetical protein AURANDRAFT_69453, partial [Aureococcus anophagefferens] >gi|323444961|gb|EGB01830.1| hypothetical protein AURANDRAFT_69453, partial [Aureococcus anophagefferens]) HSP 1 Score: 128.257 bits (321), Expect = 1.170e-30 Identity = 80/155 (51.61%), Postives = 100/155 (64.52%), Query Frame = 0
Query: 5 DSNALRKGKWTSEEEEFTQRMIEYFNTGLLPLPNGTTLRAYLAEKLKCDPMRITKKFTGAACLGRRVYRPSI---SSSSTRAEPSPSAVASAKSHLMELEARMWQRLERRRENKDYMGCLEYDAGGYDSSYLVSTPAIDALLRQSRNDPHFWDED 156
D RKGKWT EE EFT R+IE FNTGLL LP G TLR+YLA+KL CDPMRITKKF+GA+CLG+RV+ S +S++ PS ++VA+A+ L LEAR R E+KD ++ +A S +VSTPAIDA + QS WD D
Sbjct: 28 DGATTRKGKWTIEETEFTTRIIELFNTGLLELPEGATLRSYLAQKLSCDPMRITKKFSGASCLGKRVFHSSTGRQRNSASAVAPSAASVAAAQQELSVLEARFVDACIRSTESKDAR-MIDLEARFLHSHDVVSTPAIDAFIMQSCQP--LWDPD 179
BLAST of EWM26332.1 vs. NCBI_GenBank
Match: gi|1210531978|dbj|GAX09406.1| (hypothetical protein FisN_6Lh221 [Fistulifera solaris]) HSP 1 Score: 124.79 bits (312), Expect = 2.663e-27 Identity = 61/109 (55.96%), Postives = 76/109 (69.72%), Query Frame = 0
Query: 1 MSALDSNALRKGKWTSEEEEFTQRMIEYFNTGLLPLPNGTTLRAYLAEKLKCDPMRITKKFTGAACLGRRVYRPSISSSSTRAEPSPSAVASAKSHLMELEARMWQRLE 109
+SA + + LRKGKWT EEEE+T R+I YF+TGLL LP G TLR+YLAEKL CDPMRITKK+ GAACLGRR Y+ A P+ + A++ L +LE R R+E
Sbjct: 88 ISAKERSMLRKGKWTPEEEEYTSRIIHYFSTGLLILPEGHTLRSYLAEKLNCDPMRITKKYAGAACLGRRAYQ-----YREHAPPTIGEIQLARTQLDDLEHRFRMRVE 191
BLAST of EWM26332.1 vs. NCBI_GenBank
Match: gi|1210520889|dbj|GAX20270.1| (hypothetical protein FisN_6Hh221 [Fistulifera solaris]) HSP 1 Score: 124.405 bits (311), Expect = 3.833e-27 Identity = 61/109 (55.96%), Postives = 76/109 (69.72%), Query Frame = 0
Query: 1 MSALDSNALRKGKWTSEEEEFTQRMIEYFNTGLLPLPNGTTLRAYLAEKLKCDPMRITKKFTGAACLGRRVYRPSISSSSTRAEPSPSAVASAKSHLMELEARMWQRLE 109
+SA + + LRKGKWT EEEE+T R+I YF+TGLL LP G TLR+YLAEKL CDPMRITKK+ GAACLGRR Y+ A P+ + A++ L +LE R R+E
Sbjct: 125 ISAKERSMLRKGKWTPEEEEYTSRIIHYFSTGLLILPEGYTLRSYLAEKLNCDPMRITKKYAGAACLGRRAYQ-----YREHAPPTIGEIQLARTQLDDLEHRFRMRVE 228
BLAST of EWM26332.1 vs. NCBI_GenBank
Match: gi|1210526797|dbj|GAX14445.1| (hypothetical protein FisN_11Hh096 [Fistulifera solaris]) HSP 1 Score: 121.324 bits (303), Expect = 5.030e-27 Identity = 54/106 (50.94%), Postives = 77/106 (72.64%), Query Frame = 0
Query: 9 LRKGKWTSEEEEFTQRMIEYFNTGLLPLPNGTTLRAYLAEKLKCDPMRITKKFTGAACLGRRVYRPSISSSSTRAEPSPSAVASAKSHLMELEARMWQRLERRREN 114
LR+GKWT+EEE + R+I+ FN+G L P GTTLR YL+EKL+CDPMRITKKFTG AC+G+RV+ P++ R+ + S + A++ L+ LE R +RLE ++ +
Sbjct: 157 LRRGKWTAEEEAYVARVIQDFNSGFLDAPAGTTLRTYLSEKLQCDPMRITKKFTGDACIGKRVFHPAV-----RSPNNVSTIDKAQAELLHLEKRWHRRLESQQRD 257
BLAST of EWM26332.1 vs. NCBI_GenBank
Match: gi|219128023|ref|XP_002184223.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404454|gb|EEC44401.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 122.479 bits (306), Expect = 5.189e-27 Identity = 57/105 (54.29%), Postives = 75/105 (71.43%), Query Frame = 0
Query: 5 DSNALRKGKWTSEEEEFTQRMIEYFNTGLLPLPNGTTLRAYLAEKLKCDPMRITKKFTGAACLGRRVYRPSISSSSTRAEPSPSAVASAKSHLMELEARMWQRLE 109
D + LRKGKW+ EEEE+T R+I YF+TG + LP G+TLR+YLA+KL CDPMRITKK+ GA+CLGRRVY+ R +P+ + + AK+ L LE R R+E
Sbjct: 123 DRSKLRKGKWSIEEEEYTSRIIHYFSTGFISLPEGSTLRSYLADKLNCDPMRITKKYAGASCLGRRVYQ-----FRDRVQPTMTEIQIAKAELDHLERRFRLRVE 222
BLAST of EWM26332.1 vs. NCBI_GenBank
Match: gi|553196459|ref|XP_005856348.1| (hypothetical protein NGA_2018700, partial [Nannochloropsis gaditana CCMP526] >gi|422292702|gb|EKU20004.1| hypothetical protein NGA_2018700, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 122.479 bits (306), Expect = 1.669e-26 Identity = 60/119 (50.42%), Postives = 73/119 (61.34%), Query Frame = 0
Query: 6 SNALRKGKWTSEEEEFTQRMIEYFNTGLLPLPNGTTLRAYLAEKLKCDPMRITKKFTGAACLGRRVY-------RPSISSSSTRAEPSPSAVASAKSHLMELEARMWQRLERRRENKDY 117
S LRKGKWT EEEE+T R+I YFN GLL LP G TLRAY++ KLKCDPMR+TKKFTGA C+G++ + +P + +P V AK L LE R W LE+ E Y
Sbjct: 288 SGILRKGKWTVEEEEYTARLIYYFNRGLLQLPEGQTLRAYISHKLKCDPMRVTKKFTGACCIGKKAFSGAQQALQPHLQRGEVGQGVAPEDVNRAKEELERLEKRFWTTLEQSEEGYCY 406
BLAST of EWM26332.1 vs. NCBI_GenBank
Match: gi|1072220897|gb|OEU05753.1| (hypothetical protein FRACYDRAFT_258386 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 121.324 bits (303), Expect = 2.522e-26 Identity = 60/101 (59.41%), Postives = 71/101 (70.30%), Query Frame = 0
Query: 9 LRKGKWTSEEEEFTQRMIEYFNTGLLPLPNGTTLRAYLAEKLKCDPMRITKKFTGAACLGRRVYRPSISSSSTRAEPSPSAVASAKSHLMELEARMWQRLE 109
LRKGKWT EEEE+T R+I+YF+TGLL LP+G TLR+YLA+KL CDPMRITKKFTGA CLGRR Y ++ AE V A L+ LE R R+E
Sbjct: 56 LRKGKWTIEEEEYTSRIIQYFSTGLLTLPDGATLRSYLADKLNCDPMRITKKFTGACCLGRRAYHLRDRPRASFAE-----VEMANLELLHLERRFRLRVE 151
BLAST of EWM26332.1 vs. NCBI_GenBank
Match: gi|585108131|gb|EWM26137.1| (hypothetical protein Naga_100014g82 [Nannochloropsis gaditana]) HSP 1 Score: 120.939 bits (302), Expect = 1.094e-25 Identity = 60/119 (50.42%), Postives = 73/119 (61.34%), Query Frame = 0
Query: 6 SNALRKGKWTSEEEEFTQRMIEYFNTGLLPLPNGTTLRAYLAEKLKCDPMRITKKFTGAACLGRRVY-------RPSISSSSTRAEPSPSAVASAKSHLMELEARMWQRLERRRENKDY 117
S LRKGKWT EEEE+T R+I YFN GLL LP G TLRAY++ KLKCDPMR+TKKFTGA C+G++ + +P + +P V AK L LE R W LE+ E Y
Sbjct: 388 SGILRKGKWTVEEEEYTARLIYYFNRGLLQLPEGQTLRAYISHKLKCDPMRVTKKFTGACCIGKKAFSGAQQALQPHLQRGEVGQGVAPEDVNRAKEELERLEKRFWTTLEQSEEGYCY 506 The following BLAST results are available for this feature:
BLAST of EWM26332.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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