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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100268g12.9466.mrna |
| Orig protein id | gnl|cribi|Naga_100268g12.9466 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:318887..319941 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4333 ID=rna4333|Name=rna4333|organism=Nannochloropsis gaditana|type=mRNA|length=1217bp
TCTTTCCGTTTGGAGAGATTAAGAGGGGTTTCGTGCTCGAGCCTCGTGGC
GGTTGGTAAGATTCCCTACCGCTCCCATAGTTTTTAACAGGGGGACAGGA
ATGTTTGTCGCAGTCTCGTATATCAAGCTCATACTTCTCTCTGTGAATTT
CTTTGTGCAGGCCTCCCTTGGTGTAGAGGCAGCTGTAGCGGCATCCGCAT
TATAAGGAGGAGAGGTGCTTGTGGGGTTTGTCCATTCCGTGTGAGCGAAC
GGATTGACGAACAACAGGAATTGAGAAGCGGAGAAATTCCAAGCAACTAT
TAGCAAGAATTTAAAGAAAACATCATTCGGATATATACACACGGTCAGAC
AGTATGTCTGTAGCAACAGACGTGATGGATGCTGGAGGCATCGGCACATT
CAACTTGGAGCATGGGTTTCCGGAGGCCGTCGTGCGGGGGTTCCGCTCGG
GCCTTTTGACGGATTACGATTACCACCATCTGACGCAGTGCGAGACCCTG
GAGGACATGAAGATGAACCTGCAGGAGACGGACTACGACCAGTTCATGTC
GAACGAGCAGCACATCACTCCCGCCTCCTTCCGCGAGAAGGCCTTGCAGA
AGTTGGTGCAGGAAATGGATTTCTTGCGCGCGCACGCGGTGGAGCCATTG
GCCACGTTTCTGGACTACATCTCCTACGAATTCATGATCGATAACGTGAT
GCTTCTGTTGAAGGGGACCTTGAGCGGTCGAAGCGCGAACGAGCTCATCA
AGCAGTGCAACCCCCTGGGGCTTTTCAAAGAGAGCACGATGCGTTCCATC
CCCACATTCGAGGCCTCGCCCAAGGGGTACGCGGACCTGTACCAGACGGT
CCTGATCGACACCCCCGTGGGCCCCTACTTCTCCCAGTATCTGGAGGACA
GCGCAGAGCATCTGGGGGATGCCTCGGAGATGAGGAACATTCTGGAAGAA
GTTCAGATTGAGGTCATCAAGAACTCCCTCCACAAGCTCTATCTCGAGGA
CTTCTACAGGGTCACTCAGGCCATAGGGGGGGAGACCGCCAACTTTATGG
GCCACCTGATCATGCTGCGCGCGGACCGGATGGCCATCAACATCACTGTG
AACAGGTATTTCTTCCCTCCCTGCTCCCCGTCCTCCCCCGCGGGCTCGCC
TTCTCCTCCTCAACGATCCCCTCCCTCCCTTCCTCCCTCTTCCCTCCCTC
CCTCCCTCCCTCCCTTT back to topprotein sequence of rna4333 >rna4333-protein ID=rna4333-protein|Name=rna4333|organism=Nannochloropsis gaditana|type=polypeptide|length=177bp
SLFQHRHPPQRARHALHPSQALPCRWLPVPRRDRPPGRCHRREQHRIRAQ
CRARVPKTLRLPRGLEGQDLGGRVLRAGRASLRDGLRWTDAFRLLLRLRE
AEGAGDQESRLDRRVHPPRPEGRDQQIRSDLLGLGAVAAGGKSGSMREGR
REGDGWVRVMTRGNEGARRPGRGVDRP back to topmRNA from alignment at CM002463.1:318887..319941+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4333 ID=rna4333|Name=rna4333|organism=Nannochloropsis gaditana|type=mRNA|length=1055bp|location=Sequence derived from alignment at CM002463.1:318887..319941+ (Nannochloropsis gaditana)
TCCCTTTTTCAGCATCGGCACCCCCCTCAACGAGCCCGCCATGCGCTCCA
CCCGTCACAAGCTCTACCCTGCCGTTGGTTACCTGTACCCCGCCGGGACC
GCCCGCCTGGCCGATGTCACCGACGAGAACAACATCGAATACGCGCTCAG
TGCCGTGCCCGAGTACCAAAAACTCTACGCCTCCCTCGCGGGCTTGAAGG
TCCTTGtcacctctccctcgtttcctccctttcaccctcccattcctcct
ttcctcctccggcgggACGATGCCGCTCCGGACGCGGCTGGCTTCTATGA
AAAGTGCGTCTCAACGGGCCCCTAtacccccccttttcccccccttgtct
cccaGGACAAGACCTTGGAGGACGTGTTTTACGAGCAGGACGTGCGAGCC
TTCGAGATGGCCTTCGATGGACAGATGCATTTCGCCTCCTTCTACGCCTA
CGTGAAgctgaaggagcaggagatcaggtgtgggaggagggaggggggga
tagGAAGGAATGGGGCGTGCTATGTTTTGTCTAGGCGGTTGGGGGGCTTT
TATCATGGATTTACTCACTTGgtgacttcctccctctcaggAATCTCGTC
TGGATCGCCGAGTGCATCCTCCAAGgccagaaggaagagatcaACAAATt
cgttccgatcttctcgGACTCGGCGCCGTGGCGGCTGGCGGGAAAAGTGG
GtcgatgagggagggaaggagggaaggagatgggtGGGTGAGAGTGATGA
CAcgagggaacgagggggcCCGGAGGCCTGGAAGGGGCGTGGACAGGCCA
TGATACAGCACTGATTTGTGGATGAGAACGCGTGGAtgtgaggggagggg
catcGGTAGACAGATCGGTGATCAGAGGGGTCCTGCAGGATCTggtcgag
gggggaaggcctagagggagaagggggtggagccTACGCCCAGGTACAGA
GTACAAGAAATGAAATCGAACATAAATGCAAAGGGACATCCGGGAGCCCC
ATCCAGGGCGACCCTCACCTCCctatccccttcctcggcgaACAGCCTTT
AAACC back to topCoding sequence (CDS) from alignment at CM002463.1:318887..319941+ >rna4333 ID=rna4333|Name=rna4333|organism=Nannochloropsis gaditana|type=CDS|length=1602bp|location=Sequence derived from alignment at CM002463.1:318887..319941+ (Nannochloropsis gaditana)
TCCCTTTTTCAGCATCGGCACCCCCCTCAACGAGCCCGCCATGCGCTCCA
CCCGTCACAAGCTCTACCCTGCCGTTGGTTACCTGTACCCCGCCGGGACC
GCCCGCCTGGCCGATGTCACCGACGAGAACAACATCGAATACGCGCTCAG
TGCCGTGCCCGAGTACCAAAAACTCTACGCCTCCCTCGCGGGCTTGAAGG
ACAAGACCTTGGAGGACGTGTTTTACGAGCAGGACGTGCGAGCCTTCGAG
ATGGCCTTCGATGGACAGATGCATTTCGCCTCCTTCTACGCCTACGTGAA
gctgaaggagcaggagatcaggAATCTCGTCTGGATCGCCGAGTGCATCC
TCCAAGgccagaaggaagagatcaACAAATtcgttccgatcttctcgGAC
TCGGCGCCGTGGCGGCTGGCGGGAAAAGTGGGtcgatgagggagggaagg
agggaaggagatgggtGGGTGAGAGTGATGACAcgagggaacgagggggc
CCGGAGGCCTGGAAGGGGCGTGGACAGGCCATGATCCCTTTTTCAGCATC
GGCACCCCCCTCAACGAGCCCGCCATGCGCTCCACCCGTCACAAGCTCTA
CCCTGCCGTTGGTTACCTGTACCCCGCCGGGACCGCCCGCCTGGCCGATG
TCACCGACGAGAACAACATCGAATACGCGCTCAGTGCCGTGCCCGAGTAC
CAAAAACTCTACGCCTCCCTCGCGGGCTTGAAGGACAAGACCTTGGAGGA
CGTGTTTTACGAGCAGGACGTGCGAGCCTTCGAGATGGCCTTCGATGGAC
AGATGCATTTCGCCTCCTTCTACGCCTACGTGAAgctgaaggagcaggag
atcaggAATCTCGTCTGGATCGCCGAGTGCATCCTCCAAGgccagaagga
agagatcaACAAATtcgttccgatcttctcgGACTCGGCGCCGTGGCGGC
TGGCGGGAAAAGTGGGtcgatgagggagggaaggagggaaggagatgggt
GGGTGAGAGTGATGACAcgagggaacgagggggcCCGGAGGCCTGGAAGG
GGCGTGGACAGGCCATGATCCCTTTTTCAGCATCGGCACCCCCCTCAACG
AGCCCGCCATGCGCTCCACCCGTCACAAGCTCTACCCTGCCGTTGGTTAC
CTGTACCCCGCCGGGACCGCCCGCCTGGCCGATGTCACCGACGAGAACAA
CATCGAATACGCGCTCAGTGCCGTGCCCGAGTACCAAAAACTCTACGCCT
CCCTCGCGGGCTTGAAGGACAAGACCTTGGAGGACGTGTTTTACGAGCAG
GACGTGCGAGCCTTCGAGATGGCCTTCGATGGACAGATGCATTTCGCCTC
CTTCTACGCCTACGTGAAgctgaaggagcaggagatcaggAATCTCGTCT
GGATCGCCGAGTGCATCCTCCAAGgccagaaggaagagatcaACAAATtc
gttccgatcttctcgGACTCGGCGCCGTGGCGGCTGGCGGGAAAAGTGGG
tcgatgagggagggaaggagggaaggagatgggtGGGTGAGAGTGATGAC
AcgagggaacgagggggcCCGGAGGCCTGGAAGGGGCGTGGACAGGCCAT
GA back to top
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