EWM26341.1, cds4323 (CDS) Nannochloropsis gaditana

Overview
NameEWM26341.1
Unique Namecds4323
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:318887..319085 +
Alignment locationCM002463.1:319242..319363 +
Alignment locationCM002463.1:319477..319689 +

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Properties
Property NameValue
Start range318887
Start range.
Protein idEWM26341.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100268g12.9466.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:318887..319085 +
CM002463.1supercontigCM002463.1:319242..319363 +
CM002463.1supercontigCM002463.1:319477..319689 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26341.1 vs. NCBI_GenBank
Match: gi|585108350|gb|EWM26341.1| (hypothetical protein Naga_100268g12, partial [Nannochloropsis gaditana])

HSP 1 Score: 337.806 bits (865), Expect = 4.191e-117
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0 
Query:    1 SLFQHRHPPQRARHALHPSQALPCRWLPVPRRDRPPGRCHRREQHRIRAQCRARVPKTLRLPRGLEGQDLGGRVLRAGRASLRDGLRWTDAFRLLLRLREAEGAGDQESRLDRRVHPPRPEGRDQQIRSDLLGLGAVAAGGKSGSMREGRREGDGWVRVMTRGNEGARRPGRGVDRP 177
            SLFQHRHPPQRARHALHPSQALPCRWLPVPRRDRPPGRCHRREQHRIRAQCRARVPKTLRLPRGLEGQDLGGRVLRAGRASLRDGLRWTDAFRLLLRLREAEGAGDQESRLDRRVHPPRPEGRDQQIRSDLLGLGAVAAGGKSGSMREGRREGDGWVRVMTRGNEGARRPGRGVDRP
Sbjct:    1 SLFQHRHPPQRARHALHPSQALPCRWLPVPRRDRPPGRCHRREQHRIRAQCRARVPKTLRLPRGLEGQDLGGRVLRAGRASLRDGLRWTDAFRLLLRLREAEGAGDQESRLDRRVHPPRPEGRDQQIRSDLLGLGAVAAGGKSGSMREGRREGDGWVRVMTRGNEGARRPGRGVDRP 177
The following BLAST results are available for this feature:
BLAST of EWM26341.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108350|gb|EWM26341.1|4.191e-117100.00hypothetical protein Naga_100268g12, partial [Nann... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4333rna4333Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications