rna433, rna433 (mRNA) Nannochloropsis gaditana

Overview
Namerna433
Unique Namerna433
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length696
Alignment locationCM002455.1:1075397..1076638 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100003g49.1783.mrna
Orig protein idgnl|cribi|Naga_100003g49.1783
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1075397..1076638 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100003g49gene417Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna433rna433-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30266.1cds433Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna433 ID=rna433|Name=rna433|organism=Nannochloropsis gaditana|type=mRNA|length=696bp
TCGAAAAAGGTGACCAAACACTGATCCCCCCTTCCCTTTCCGCACACACC
TTCAGCATAGCGTAGAGTAGAAATTCGCAATCTCGACTGAGTGGCTCTCT
GGCTAAATATGTCATCGAGTAGGCCGACGTCTACAACTACTAGTGGAGTT
GGGTCAAAAGGCGGTCAAAGCAGCAAGCCGAAGTCCGACACCCCATCTAG
TGCAGCACCCGTTCTATCAAAGTGTGATCCAAACATTCCCACGTCGAGCT
CTGATTGTCTGGGGTCTGCAATCCAGCTGCCTCATGGGGAGCCGCAGGGT
CACTTGGCTCGGCAAGACGACCCTGCAAGGTATGTGCGTTCTCTGCTCGA
TGACATGCAGAGTCGCTTCGAAAATATGAGCCAGCAGATTTTAAGCAAAA
TTGATACATTTGGATCCAAGGTCGACGCCCTGGAAGCCGAGATATCGGAG
CTTATGAATGAAGCTGGGGCTGAATTTGAAGACGAAGTGCTGGGGAAGTC
AGAGGGAAAAGGGAAGGAGGTTCTTTCCGAGAAGATAACATTGGACTCTG
AAGCGTGAGTAAGTCGTACCATAGACAGGGCACTTAAATTGTGAAGGTAG
ACAGCTGTTGGGAAAATGTCTGACCCTCTGCCCATGTATGAACGTAGAAG
TTCCGAACGAATACACAGTACAGTAAGAAAAGGCATGGCACTCTGG
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protein sequence of rna433

>rna433-protein ID=rna433-protein|Name=rna433|organism=Nannochloropsis gaditana|type=polypeptide|length=208bp
MRALSVGLILATIVGAAAFVVPPLSLPSRDFKIRLSAGGNEDCGTSLERR
SALHNSLCQAVTLSMFMFGGATWISAPSQAMAAVGEGGLPAVTEAFQRVI
RGQREWNKVGKTIADREGKLADEEWVNTQIFLRNSYMVGEDMRRIVRDAE
ESKREKGTAIAKDFQRLTLDMDKPTKSKDFQGFIEAQKKGASYFQDFIDL
LSDVPDEL
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mRNA from alignment at CM002455.1:1075397..1076638-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna433 ID=rna433|Name=rna433|organism=Nannochloropsis gaditana|type=mRNA|length=1242bp|location=Sequence derived from alignment at CM002455.1:1075397..1076638- (Nannochloropsis gaditana)
TGGACAGAAGTTAACTTCATCGATGCTTTGATTCCAGGTACAGGTCGAGC
ACGATGCGCGCTCTCAGCGTGGGCCTCATTCTAGCCACGATAGTTGGAGC
GGCAGCTTTTGTCGTACCGCCCCTCTCTCTTCCATCACGTGACTTCAAAA
TTCGTTTAAGCGCTGGAGGAAACGAGGACTGTGGCACGAGCCTTGAACGC
CGCTCCGCCTTGCACAATTCTCTGTGTCAGGCAGTGACCCTGTCGATGTT
CATGTTTGGCGGTGCTACTTGGATCTCCGCGCCGTCTCAAGCCATGGCAG
CGGTTGGAGAAGGTATATAATCTTGCTGAAACATAGAAACTCTGGATAGA
AGCGATAACACGATCTCGTAAGGAGCTAATGATGTAACGTTTTGATTGAA
ATCACCCTGCCAGGTGGATTGCCCGCCGTTACAGAGGCATTTCAGCGCGT
CATTCGCGGTCAGAGAGAATGGAATAAGGTGGGGAAAACGATTGCTGACA
GGGAAGGGAAGCTGGCGGACGAGGAATGGGTGAATACTCAGATCTTCTTG
CGGTAAGAGGGAAGACGGAAGAAAGAGTGATGCTATATAGCGGATTGATG
TATAGCTTTCGAGGAATCGAGATCCGCTTCGTCATGCTCTTATCAAGTAA
AGTTTTCATAAAATTTCTTACATATGTCATGTGATCTCCAGAAATTCTTA
TATGGTGGGCGAGGACATGCGGCGAATCGTTCGCGATGCTGAGGAGAGCA
AGCGGGTAAGGCGGGACTCCGAATAGGGCATTTGTTTAGAGCAATTATGC
ATATCATATCATTGCGTGCATGCCGAATTTGAGTGAGCCCTCCTTCGTTA
CCAAATGGCAGTCGTCTTCCTACCAGAACGCATTCATTTATGGTTCCGTG
AGGGCCTGTCTAACCCGGACCTGAGTACAATTCTTGACTTTCTCCTCAAA
AAACAGGAAAAGGGCACGGCCATTGCCAAAGATTTTCAACGTCTGACCCT
GGACATGGATAAGCCTACCAAAAGCAAAGACTTTCAGGGCTTCATCGAGG
CGCAGAAGAAGGGCGCTTCCTACTTCCAGGACTTCATAGACCTGCTGAGC
GACGTGCCCGACGAGCTGTAAGGAAAGAGTGATATTGCTTTTTAAAAGCA
TGACTTGTTAAATGCACAGATGGCAGTCAGATATTCTCGGCCGATGAAAC
GCCTTGAGTGAAAGAAACAAAACAAAACCAGAGTGCCATGCC
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Coding sequence (CDS) from alignment at CM002455.1:1075397..1076638-

>rna433 ID=rna433|Name=rna433|organism=Nannochloropsis gaditana|type=CDS|length=2508bp|location=Sequence derived from alignment at CM002455.1:1075397..1076638- (Nannochloropsis gaditana)
GAAAAGGGCACGGCCATTGCCAAAGATTTTCAACGTCTGACCCTGGACAT
GGATAAGCCTACCAAAAGCAAAGACTTTCAGGGCTTCATCGAGGCGCAGA
AGAAGGGCGCTTCCTACTTCCAGGACTTCATAGACCTGCTGAGCGACGTG
CCCGACGAGCTGTAAAAATTCTTATATGGTGGGCGAGGACATGCGGCGAA
TCGTTCGCGATGCTGAGGAGAGCAAGCGGGTGGATTGCCCGCCGTTACAG
AGGCATTTCAGCGCGTCATTCGCGGTCAGAGAGAATGGAATAAGGTGGGG
AAAACGATTGCTGACAGGGAAGGGAAGCTGGCGGACGAGGAATGGGTGAA
TACTCAGATCTTCTTGCGATGCGCGCTCTCAGCGTGGGCCTCATTCTAGC
CACGATAGTTGGAGCGGCAGCTTTTGTCGTACCGCCCCTCTCTCTTCCAT
CACGTGACTTCAAAATTCGTTTAAGCGCTGGAGGAAACGAGGACTGTGGC
ACGAGCCTTGAACGCCGCTCCGCCTTGCACAATTCTCTGTGTCAGGCAGT
GACCCTGTCGATGTTCATGTTTGGCGGTGCTACTTGGATCTCCGCGCCGT
CTCAAGCCATGGCAGCGGTTGGAGAAGGAAAAGGGCACGGCCATTGCCAA
AGATTTTCAACGTCTGACCCTGGACATGGATAAGCCTACCAAAAGCAAAG
ACTTTCAGGGCTTCATCGAGGCGCAGAAGAAGGGCGCTTCCTACTTCCAG
GACTTCATAGACCTGCTGAGCGACGTGCCCGACGAGCTGTAAAAATTCTT
ATATGGTGGGCGAGGACATGCGGCGAATCGTTCGCGATGCTGAGGAGAGC
AAGCGGGTGGATTGCCCGCCGTTACAGAGGCATTTCAGCGCGTCATTCGC
GGTCAGAGAGAATGGAATAAGGTGGGGAAAACGATTGCTGACAGGGAAGG
GAAGCTGGCGGACGAGGAATGGGTGAATACTCAGATCTTCTTGCGATGCG
CGCTCTCAGCGTGGGCCTCATTCTAGCCACGATAGTTGGAGCGGCAGCTT
TTGTCGTACCGCCCCTCTCTCTTCCATCACGTGACTTCAAAATTCGTTTA
AGCGCTGGAGGAAACGAGGACTGTGGCACGAGCCTTGAACGCCGCTCCGC
CTTGCACAATTCTCTGTGTCAGGCAGTGACCCTGTCGATGTTCATGTTTG
GCGGTGCTACTTGGATCTCCGCGCCGTCTCAAGCCATGGCAGCGGTTGGA
GAAGGAAAAGGGCACGGCCATTGCCAAAGATTTTCAACGTCTGACCCTGG
ACATGGATAAGCCTACCAAAAGCAAAGACTTTCAGGGCTTCATCGAGGCG
CAGAAGAAGGGCGCTTCCTACTTCCAGGACTTCATAGACCTGCTGAGCGA
CGTGCCCGACGAGCTGTAAAAATTCTTATATGGTGGGCGAGGACATGCGG
CGAATCGTTCGCGATGCTGAGGAGAGCAAGCGGGTGGATTGCCCGCCGTT
ACAGAGGCATTTCAGCGCGTCATTCGCGGTCAGAGAGAATGGAATAAGGT
GGGGAAAACGATTGCTGACAGGGAAGGGAAGCTGGCGGACGAGGAATGGG
TGAATACTCAGATCTTCTTGCGATGCGCGCTCTCAGCGTGGGCCTCATTC
TAGCCACGATAGTTGGAGCGGCAGCTTTTGTCGTACCGCCCCTCTCTCTT
CCATCACGTGACTTCAAAATTCGTTTAAGCGCTGGAGGAAACGAGGACTG
TGGCACGAGCCTTGAACGCCGCTCCGCCTTGCACAATTCTCTGTGTCAGG
CAGTGACCCTGTCGATGTTCATGTTTGGCGGTGCTACTTGGATCTCCGCG
CCGTCTCAAGCCATGGCAGCGGTTGGAGAAGGAAAAGGGCACGGCCATTG
CCAAAGATTTTCAACGTCTGACCCTGGACATGGATAAGCCTACCAAAAGC
AAAGACTTTCAGGGCTTCATCGAGGCGCAGAAGAAGGGCGCTTCCTACTT
CCAGGACTTCATAGACCTGCTGAGCGACGTGCCCGACGAGCTGTAAAAAT
TCTTATATGGTGGGCGAGGACATGCGGCGAATCGTTCGCGATGCTGAGGA
GAGCAAGCGGGTGGATTGCCCGCCGTTACAGAGGCATTTCAGCGCGTCAT
TCGCGGTCAGAGAGAATGGAATAAGGTGGGGAAAACGATTGCTGACAGGG
AAGGGAAGCTGGCGGACGAGGAATGGGTGAATACTCAGATCTTCTTGCGA
TGCGCGCTCTCAGCGTGGGCCTCATTCTAGCCACGATAGTTGGAGCGGCA
GCTTTTGTCGTACCGCCCCTCTCTCTTCCATCACGTGACTTCAAAATTCG
TTTAAGCGCTGGAGGAAACGAGGACTGTGGCACGAGCCTTGAACGCCGCT
CCGCCTTGCACAATTCTCTGTGTCAGGCAGTGACCCTGTCGATGTTCATG
TTTGGCGGTGCTACTTGGATCTCCGCGCCGTCTCAAGCCATGGCAGCGGT
TGGAGAAG
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Synonyms
Publications