EWM30266.1, cds433 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30266.1 vs. NCBI_GenBank
Match: gi|585112925|gb|EWM30266.1| (hypothetical protein Naga_100003g49 [Nannochloropsis gaditana]) HSP 1 Score: 427.172 bits (1097), Expect = 2.092e-151 Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
Query: 1 MRALSVGLILATIVGAAAFVVPPLSLPSRDFKIRLSAGGNEDCGTSLERRSALHNSLCQAVTLSMFMFGGATWISAPSQAMAAVGEGGLPAVTEAFQRVIRGQREWNKVGKTIADREGKLADEEWVNTQIFLRNSYMVGEDMRRIVRDAEESKREKGTAIAKDFQRLTLDMDKPTKSKDFQGFIEAQKKGASYFQDFIDLLSDVPDEL 208
MRALSVGLILATIVGAAAFVVPPLSLPSRDFKIRLSAGGNEDCGTSLERRSALHNSLCQAVTLSMFMFGGATWISAPSQAMAAVGEGGLPAVTEAFQRVIRGQREWNKVGKTIADREGKLADEEWVNTQIFLRNSYMVGEDMRRIVRDAEESKREKGTAIAKDFQRLTLDMDKPTKSKDFQGFIEAQKKGASYFQDFIDLLSDVPDEL
Sbjct: 1 MRALSVGLILATIVGAAAFVVPPLSLPSRDFKIRLSAGGNEDCGTSLERRSALHNSLCQAVTLSMFMFGGATWISAPSQAMAAVGEGGLPAVTEAFQRVIRGQREWNKVGKTIADREGKLADEEWVNTQIFLRNSYMVGEDMRRIVRDAEESKREKGTAIAKDFQRLTLDMDKPTKSKDFQGFIEAQKKGASYFQDFIDLLSDVPDEL 208
BLAST of EWM30266.1 vs. NCBI_GenBank
Match: gi|397616916|gb|EJK64197.1| (hypothetical protein THAOC_15101 [Thalassiosira oceanica]) HSP 1 Score: 90.8929 bits (224), Expect = 2.727e-19 Identity = 55/150 (36.67%), Postives = 77/150 (51.33%), Query Frame = 0
Query: 61 VTLSMFMFGGATWISAPSQAMAAVGEGG-LPAVTEAFQRVIRGQREWNKVGKTIADREGKLADEEWVNTQIFLRNSYMVGEDMRRIVRD-AEESKREKGTAIAKDFQRLTLDMDKPTKSKDFQGFIEAQKKGASYFQDFIDLLSDVPDEL 208
V+ S+ G A WIS+PS ++A V +G LP F RVI+ + + V K +A++ ++ ++EW +LR Y G DM+ I + + SK+ K K Q L KP KD GF K S F+DF D L DVPDEL
Sbjct: 49 VSSSIAGAGLAVWISSPSPSLADVSDGNSLPQGAAQFSRVIKVRSQLKSVAKRVAEQSSEMDNKEWDKIDEYLRTVYSAGNDMKEISKGMTDPSKKAKAEEDVKLLQGLVQAAQKPVSKKDAAGFGAIANKADSLFEDFFDQLRDVPDEL 198
BLAST of EWM30266.1 vs. NCBI_GenBank
Match: gi|299116744|emb|CBN74857.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 87.8113 bits (216), Expect = 1.049e-17 Identity = 51/180 (28.33%), Postives = 86/180 (47.78%), Query Frame = 0
Query: 29 RDFKIRLSAGGNEDCGTSLERRSALHNSLCQAVTLSMFMFGGATWISAPSQAMAAVGEGGLPAVTEAFQRVIRGQREWNKVGKTIADREGKLADEEWVNTQIFLRNSYMVGEDMRRIVRDAEESKREKGTAIAKDFQRLTLDMDKPTKSKDFQGFIEAQKKGASYFQDFIDLLSDVPDEL 208
R R++ G G + R L A+T ++ + G + SA VGEGGLP F +++ Q++W +GK+I + + +EW N +FLR Y +G ++ + K++ A+ + Q+ D P + KD F++AQ F+DF++L +DVP EL
Sbjct: 70 RSRATRMTTGALPSDGGGMSRGQWAGRMLGAAITGAVAVSQGPEFASAE----VGVGEGGLPDGARQFSNLVKVQKDWAALGKSIERQGADVTADEWKNVALFLRKVYQLGGELEYLAGTFPPDKKKSALALVRSIQKEVQAADVPAREKDAAAFMKAQASVQKKFEDFMELFNDVPSEL 245
BLAST of EWM30266.1 vs. NCBI_GenBank
Match: gi|873229124|emb|CEM14000.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 81.6481 bits (200), Expect = 2.415e-15 Identity = 46/133 (34.59%), Postives = 70/133 (52.63%), Query Frame = 0
Query: 77 PSQAMAAVGEGG-LPAVTEAFQRVIRGQREWNKVGKTIADREGKLADEEWVNTQIFLRNSYMVGEDMRRIVRDAEESKREKGTAIAKDFQRLTLDMDKPTKSKDFQGFIEAQKKGASYFQDFIDLLSDVPDEL 208
P A A V G LPA R I+ + W ++G + R + +EW + FLR Y +DMR I + + K ++ + K+F++ MDKP + D + F+ +Q+K QDF+D+LSDVPDEL
Sbjct: 117 PVSAYADVYSGDTLPAGALQRDRFIKAKLRWEEMGSALRARTDDITADEWKGLRNFLRAMYKESDDMRFISKGLDPEKDKQSKQLIKNFEKTIESMDKPATAGDKEVFLASQQKITQTMQDFLDVLSDVPDEL 249
BLAST of EWM30266.1 vs. NCBI_GenBank
Match: gi|551646742|ref|XP_005826157.1| (hypothetical protein GUITHDRAFT_165053 [Guillardia theta CCMP2712] >gi|428170250|gb|EKX39177.1| hypothetical protein GUITHDRAFT_165053 [Guillardia theta CCMP2712]) HSP 1 Score: 79.337 bits (194), Expect = 8.975e-15 Identity = 55/215 (25.58%), Postives = 101/215 (46.98%), Query Frame = 0
Query: 4 LSVGLILATIVGAAAFVVPPLSLPSRDFKIRLSAGGNEDCGTSLERRSALHNSLCQAVTLSMFMFGGATWISAPSQAMAAVGEGGLPAVTEAFQRVIRGQREWNKVGKTIADREGKLADEEWVNTQIFLRNSYMVGEDMRRIVRDAEESKREKGTAIAKDFQRLTLDMDKPTKSKDFQGFIEAQKKGASYFQDFIDLLSD----------VPDEL 208
L+ IL+ + G +AF P + + S K R A S+ RR ++ L A L+ GA V +GGLP + +I+ +++W ++G +++ ++++EEW N Q +LR + G+DM + + +++ ++K+F++ +DKP +KD++ F+ K Y +F D+ S VPDEL
Sbjct: 11 LASACILSELSGVSAFNAPLVHIQS-SVKTRGRATPLALRMQSVNRRDSIGIMLATAGMLAQTKDVGAK----------DVADGGLPGGLAEYMSIIKSKKQWGEIGNRVSNGHAEMSEEEWKNVQGYLRKFFDTGKDMEVVAKAFSPEEQKAVAEVSKEFRKAVKGIDKPAAAKDWETFMAQHKVILGYIDEFQDIRSGKKKIQSNAQYVPDEL 214
BLAST of EWM30266.1 vs. NCBI_GenBank
Match: gi|223998250|ref|XP_002288798.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220975906|gb|EED94234.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 76.2554 bits (186), Expect = 1.014e-13 Identity = 46/135 (34.07%), Postives = 67/135 (49.63%), Query Frame = 0
Query: 77 PSQAMAAVGEG-GLPAVTEAFQRVIRGQREWNKVGKTIADREGKLADEEWVNTQIFLRNSYMVGEDMRRIVRDA--EESKREKGTAIAKDFQRLTLDMDKPTKSKDFQGFIEAQKKGASYFQDFIDLLSDVPDEL 208
P ++A V +G LP F RVI+ + + V K +A++ ++ EW FLR Y GEDM+ I + + + +K+ K K Q++ P KD GF K + F+DF DLL DVPDEL
Sbjct: 63 PLPSVADVSDGNALPQGAAQFSRVIKVRAQLKSVAKRVAEQSSEIDKNEWNKIDDFLRTVYSAGEDMKVIAKSSIFDPAKKAKADEDIKLLQKVAQAAQGPVSKKDPVGFGTVANKADALFEDFFDLLRDVPDEL 197
BLAST of EWM30266.1 vs. NCBI_GenBank
Match: gi|1210516718|dbj|GAX24207.1| (hypothetical protein FisN_4Lh299 [Fistulifera solaris]) HSP 1 Score: 68.9366 bits (167), Expect = 6.475e-11 Identity = 58/205 (28.29%), Postives = 92/205 (44.88%), Query Frame = 0
Query: 17 AAFVVPPLSLPSRDFKIRLSAGGNEDCGTSLERRSALHNSLCQAVTLSMF-------MFGGATWISA-----PSQAMAAVGEGG-LPAVTEAFQRVIRGQREWNKVGKTIADREGKLADEEWVNTQIFLRNSY-MVGEDMRRIVRDAEESK-REKGTAIAKDFQRLTLDMDKPTKSKDFQGFIEAQKKGASYFQDFIDLLSDVPD 206
+A+++ ++LP+ S + D +L RSA++ S T +M +F A +A PS A A V G LP F R IR +R+ KV K + + ++ EW N FLR Y + G+DM+ + + + +++ A ++ D P +KD GF+ +K QDF D L DVPD
Sbjct: 4 SAYLLILVTLPTATMSWVTSRVTSSD---ALRSRSAVYESSASVSTTTMNRQRFLQGIFTAALTTTAVITQQPSIARADVYSGTELPQGVAQFNRCIRLKRDLKKVTKRVQENSSEMDSTEWDNVGKFLRQIYSLAGDDMKVVASTIQSADMKQRALQDADKLRQYAQAADVPVSAKDATGFVLVAQKMNDLVQDFFDALVDVPD 205
BLAST of EWM30266.1 vs. NCBI_GenBank
Match: gi|1210516406|dbj|GAX24741.1| (hypothetical protein FisN_4Hh299 [Fistulifera solaris]) HSP 1 Score: 64.6994 bits (156), Expect = 2.717e-9 Identity = 48/165 (29.09%), Postives = 74/165 (44.85%), Query Frame = 0
Query: 45 TSLERRSALHNSLCQAVTLSMFMFGGATWISAPSQAMAAVGEGG-LPAVTEAFQRVIRGQREWNKVGKTIADREGKLADEEWVNTQIFLRNSY-MVGEDMRRIVRDAEESK-REKGTAIAKDFQRLTLDMDKPTKSKDFQGFIEAQKKGASYFQDFIDLLSDVPD 206
T++ R+ L A+T + A P+ A A V G LP F R IR +R+ KV K + + ++ EW N FLR Y + G+DM+ + + + +++ A ++ D P +KD GF+ +K QDF D L DVPD
Sbjct: 46 TTMNRQRFLQGMFTAALTTT------AVITQQPTIAHADVYSGTELPQGVAQFNRCIRLKRDLKKVTKRVQENSSEMDAAEWDNVGKFLRQIYSLAGDDMKVVAGTIQSADMKQRALQDADKLRQYAQAADVPVSAKDATGFVLVAQKMNDLVQDFFDALVDVPD 204
BLAST of EWM30266.1 vs. NCBI_GenBank
Match: gi|1189392083|gb|OSX79002.1| (hypothetical protein BU14_0093s0046 [Porphyra umbilicalis]) HSP 1 Score: 61.2326 bits (147), Expect = 5.389e-9 Identity = 32/88 (36.36%), Postives = 47/88 (53.41%), Query Frame = 0
Query: 124 EWVNTQIFLRNSYMVGEDMRRIVRDAEESKREKGTAIAKDFQRLTLDMDKPTKSKDFQGFIEAQKKGASYFQDFIDLL---SDVPDEL 208
EW N + +LR Y VG+DM + + + ++ AIAK ++ DMDKP KD++ F+ A + DF L SD+PDEL
Sbjct: 5 EWNNVRTYLRKFYSVGDDMVALGKGRGKESKQAVEAIAKSLRKTVKDMDKPAAVKDWEAFLVAHAAATTLVDDFFGYLKSSSDIPDEL 92
BLAST of EWM30266.1 vs. NCBI_GenBank
Match: gi|219130179|ref|XP_002185249.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403428|gb|EEC43381.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 63.1586 bits (152), Expect = 7.814e-9 Identity = 49/153 (32.03%), Postives = 72/153 (47.06%), Query Frame = 0
Query: 67 MFGGATWISA-----PSQAMAAVGEG-GLPAVTEAFQRVIRGQREWNKVGKTIADREGKLADEEWVNTQIFLRNSYMVGEDMRRI---VRDAEESKR--EKGTAIAKDFQRLTLDMDKPTKSKDFQGFIEAQKKGASYFQDFIDLLSDVPDEL 208
+FG A +++ PS A A V G LP F RV+R + + V K +++ ++ +EW N FLR Y G+DM+ + V D E KR E + + K Q + + K KD G + K DF D LSD+PDE+
Sbjct: 53 IFGAAGFLATSVTFMPSSASADVSSGTALPQGAAQFNRVVRVKSDLTAVRKRVSEGGSEIDKKEWDNIGKFLRTVYSTGDDMKAVGGGVLDPENKKRAMEDVSQLRKYAQAGDVSVSK----KDPIGMLAVLNKMIGLMDDFFDALSDIPDEI 201 The following BLAST results are available for this feature:
BLAST of EWM30266.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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