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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100031g4.2251.mrna |
| Orig protein id | gnl|cribi|Naga_100031g4.2251 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:308428..310691 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4329 ID=rna4329|Name=rna4329|organism=Nannochloropsis gaditana|type=mRNA|length=775bp
GGCTCAATTTAGCGCCGTATGTTTGTTTCATACCTCTAGGTCTTTCCTTT
ATGAAGCGGCGTCGAGAGGAGGGCGCAGGGGCCCGCAATGCCGGGAAAGA
CGATCCTGCTGAAGACCCTTTGGCGGGGCGGCCCGGACCCAAGCTTTTCA
TCGGATCTCTCGCGAAGAGCGTCCAGGAAAAAGATGTGCTCAATCTTTTC
CTCCCGTACGGAAAAGTCGTGGACATTGCCTTTTTCTGGCACATGCATGG
GCCGCGCAAAGGCGAACCGAAAGGTTTCTGTTTTGTGACGTACGCCCGAA
CCGAGGAGGCCACGTCTGCCATCAGGGCCTTGGACCGACGCCGTCTCCAC
GGGCGCTCCATCGCGGTGCGCTATCAACGAGACGCAGACGACATGAACAT
GGACGCGCGGACACTACTTTCCAAAGCGCGTGCAAAAAGCCTCCAGCAGA
GCGGAGGGGGAGGACGGGGGGGGCGCGCGACCGAGGGAGAGGGAGATCGG
CCCGGCAATGCCCCTCCCGAGGCCCAGCTCTGCAACTTTGAGAGGGGTGA
GCGGTGGGGGCGAGAATCAAAAAGATGGGGCAGGGGGGGATGATGATGTG
GAAGAGACGGCGTTGGAAAGCAAGATCCGTCTTCTCAAGGCGCAATTATC
GGCATCGGCTGAGGGCGGCAGTCGGGGGGGGGAGGCGGAGTGGGGGAAGG
CGGGTATAACGAGAGGGGAGACGAAGGAAATAAAAGAGACAAGACACATA
GAAAGCCGGTCTCGTCCGTAGACGC back to topprotein sequence of rna4329 >rna4329-protein ID=rna4329-protein|Name=rna4329|organism=Nannochloropsis gaditana|type=polypeptide|length=323bp
MSDPLDGLFGDLPSTTREASSSQRPAPQHEQSKAQEQRLRQKRAATAPGS
SVDNEQAKEMVHGPEAKRAREKEGCPSPPMAVSEPKTLELHEALQKITRA
LTSPKLEKSRKAMGLLTKLLTAEMNTENASQFHAALGFFMASEGVWERLL
GPGAEDRALAHALLAAVRERILLFEPSAQYRAASWILVGLLRPELLTDDT
FAFRRAARRIREYVTALEKLREGDTLADRERRKAILACLRTALKQNFHSW
AKASIEELFKATAEKRLCFPEEEREELDEMATKLRTEARGLSVNPSGTVV
SRSVRMVNSMATPFNTKKGDVFR back to topmRNA from alignment at CM002463.1:308428..310691+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4329 ID=rna4329|Name=rna4329|organism=Nannochloropsis gaditana|type=mRNA|length=2264bp|location=Sequence derived from alignment at CM002463.1:308428..310691+ (Nannochloropsis gaditana)
GTAGATAAGTAGCTGATGCGTCCAGGATCATAACCTCCTACCGGAAAAAG
GCGGCTGTCCACAACACAGATCGATGCAAACTTAAATTTATTTACGCCTT
GGCGGGGTCTCGACAAACAGTTTTTAGTGCTCAACTTTGATCTCAATGAG
TGAATTAAGATAACTCATCTATAAGTAAGAAACTTGAGGACATGTTCAAT
GCTTTTTACCTTGATCAGCTTTCCTCAGGGGTGTATTCAATAGCGATGGA
CAGACCTCTTTCTGATATCGTTATCACCGGACGTCGCTCATTGTACATCA
CAACCAAAACCAAGCAGGATAGACATGTCAGATCCACTTGATGGCCTCTT
TGGGGACCTGCCTTCTACTACGAGGGAAGCGTCAAGCTCTCAGAGACCGG
CACCGCAACATGAGCAGTCTAAGGCGCAGGAACAGCGGCTAAGGCAGAAG
CGCGCGGCCACAGCACCAGGATCCTCGGTAGACAACGAGCAAGCAAAAGA
AATGGTGCATGGCCCCGAGGCAAAGCGGGCacgagaaaaggaaggttgtc
catccccccccaTGGCAGTCTCGGAGCCGAAAACGTTGGAACTGCACGAG
GCGTTGCAGAAAATCACCCGCGCCCTGACCTCGCCCAAGCTCGAAAAAAG
TCGGAAAGCCATGGGCTTGCTGACGAAATTGCTGACAGCTGAGATGAACA
CGGAAAACGCCTCTCAGTTCCATGCCGCCCTCGGCTTTTTCATGGCCTCG
GAGGGAGTGTGGGAGCGTCTCCTAGGGCCAGGAGCGGAAGACCGCGCTTT
GGCGCATGCGTTGCTCGCAGCGGTCCGGGAGCgcatccttctcttcgaGC
CGAGTGCGCAGTATCGAGCCGCCAGTTGGATCTTGGTCGGGTTACTGCGT
CCTGAGCTTCTGACGGACGACACCTTTGCATTCCGGCGTGCGGCGCGGCG
GATCAGAGAGTACGTCACGGCCCTGGAAAAATTGAGGGAAGGCGACACTT
TGGCGGATCGAGAGCGACGGAAGGCCATCCTCGCCTGTCTGAGGACGGCC
CTCAAGCAAAATTTTCATTCGTGGGCGAAGGCGTCGATCGAGGAACTCTT
CAAGGCGACCGCGGAGAAACGTTTGTGTTTCCcggaagaggaacgggagg
aatTGGACGAGATGGCCACCAAgctgaggacggaggcgcgCGGGTTGAGT
GTGAATCCGTCGGGGACGGTGGTGTCTCGGAGCGTGCGGATGGTGAACAG
CATGGCCACCCCTTTCAACACCAAGAAAGGCGACGTCTTTCGGTAGcgcc
caggggggggggctggcaaCATGAGCGAGGCATATAAAGGACTGTACAGA
CAGAAAGATAGGATCGCTCACGAACGTGGTCATTTTTTTCATTTgtgttc
ccccccccccgttgtCCTTGTGGCGTCTTGGCCAGGACGCCACGCTGGCA
TTGCTTCGCGCAATCTTGGCATCGACTTTTCCGCACCGaccgcgcccctc
ctttttctctcaCACCATCTTCTCCGGCTGGACCCAGGCATCGTACTGCT
CGGCTGTCAGGATCCCCAGGGCCAAGGCTGCCTCCTTCAGGGTCGACTTC
TCGTGGTGGGCCTTCTTGGCGATCTGCGCCGCCTTGTCGTACCCGATGTG
CGGGTTCAAGGCCGTGACAGTCATCAAGGACTCGTGCACGTACTTGTCAA
TCCGGTCCTGGTTCACAGTCAGTCCTTCCAGCGCGTATTCGCGGAAATTT
CTGgtcggagaggggaagacaaggggaaagacggtgGCCAGAGACTGCCC
GTTACTCGTGTGAACACGCCTCGTGGATGCACCTGTGTGCCGACTCCCAT
GCAAACATTCTCCTTTTCGTTGGAAACAACcatggtcctcctcccccccc
ctcccccctcatgcactccctccctccctccctccctccgcaccgcGCCG
AGTCATGCAACAGATGGCAGGACTGCATGAGGTTCTGGATGATCACCGGC
TTGAACACGTTCAATTCAAAGGCCCCCTGGGAGGCCGCGAATCCGATCGC
TGCGTCGTTCCCCATCACCTGCGCGCAGACCATGGTCATGGCTTCGCACT
GGGTGGGGTTCACCTTCCCGGGCATGATGCTGGAGCCTGGCTCGTTCTCT
GGGAGGTTCAATTCCCCCAGCCCACACCGGGGGCCCGACGCGAGGAAGCG
CACGTCGTTCGCGATCTTGAACAGGTCGGCCGCAGCCGCCTTCAATGCGC
CGCTCAAGAGGACC back to topCoding sequence (CDS) from alignment at CM002463.1:308428..310691+ >rna4329 ID=rna4329|Name=rna4329|organism=Nannochloropsis gaditana|type=CDS|length=972bp|location=Sequence derived from alignment at CM002463.1:308428..310691+ (Nannochloropsis gaditana)
ATGTCAGATCCACTTGATGGCCTCTTTGGGGACCTGCCTTCTACTACGAG
GGAAGCGTCAAGCTCTCAGAGACCGGCACCGCAACATGAGCAGTCTAAGG
CGCAGGAACAGCGGCTAAGGCAGAAGCGCGCGGCCACAGCACCAGGATCC
TCGGTAGACAACGAGCAAGCAAAAGAAATGGTGCATGGCCCCGAGGCAAA
GCGGGCacgagaaaaggaaggttgtccatccccccccaTGGCAGTCTCGG
AGCCGAAAACGTTGGAACTGCACGAGGCGTTGCAGAAAATCACCCGCGCC
CTGACCTCGCCCAAGCTCGAAAAAAGTCGGAAAGCCATGGGCTTGCTGAC
GAAATTGCTGACAGCTGAGATGAACACGGAAAACGCCTCTCAGTTCCATG
CCGCCCTCGGCTTTTTCATGGCCTCGGAGGGAGTGTGGGAGCGTCTCCTA
GGGCCAGGAGCGGAAGACCGCGCTTTGGCGCATGCGTTGCTCGCAGCGGT
CCGGGAGCgcatccttctcttcgaGCCGAGTGCGCAGTATCGAGCCGCCA
GTTGGATCTTGGTCGGGTTACTGCGTCCTGAGCTTCTGACGGACGACACC
TTTGCATTCCGGCGTGCGGCGCGGCGGATCAGAGAGTACGTCACGGCCCT
GGAAAAATTGAGGGAAGGCGACACTTTGGCGGATCGAGAGCGACGGAAGG
CCATCCTCGCCTGTCTGAGGACGGCCCTCAAGCAAAATTTTCATTCGTGG
GCGAAGGCGTCGATCGAGGAACTCTTCAAGGCGACCGCGGAGAAACGTTT
GTGTTTCCcggaagaggaacgggaggaatTGGACGAGATGGCCACCAAgc
tgaggacggaggcgcgCGGGTTGAGTGTGAATCCGTCGGGGACGGTGGTG
TCTCGGAGCGTGCGGATGGTGAACAGCATGGCCACCCCTTTCAACACCAA
GAAAGGCGACGTCTTTCGGTAG back to top
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