EWM26368.1, cds4319 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM26368.1 vs. NCBI_GenBank
Match: gi|585108378|gb|EWM26368.1| (hypothetical protein Naga_100031g4 [Nannochloropsis gaditana]) HSP 1 Score: 653.284 bits (1684), Expect = 0.000e+0 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0
Query: 1 MSDPLDGLFGDLPSTTREASSSQRPAPQHEQSKAQEQRLRQKRAATAPGSSVDNEQAKEMVHGPEAKRAREKEGCPSPPMAVSEPKTLELHEALQKITRALTSPKLEKSRKAMGLLTKLLTAEMNTENASQFHAALGFFMASEGVWERLLGPGAEDRALAHALLAAVRERILLFEPSAQYRAASWILVGLLRPELLTDDTFAFRRAARRIREYVTALEKLREGDTLADRERRKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREELDEMATKLRTEARGLSVNPSGTVVSRSVRMVNSMATPFNTKKGDVFR 323
MSDPLDGLFGDLPSTTREASSSQRPAPQHEQSKAQEQRLRQKRAATAPGSSVDNEQAKEMVHGPEAKRAREKEGCPSPPMAVSEPKTLELHEALQKITRALTSPKLEKSRKAMGLLTKLLTAEMNTENASQFHAALGFFMASEGVWERLLGPGAEDRALAHALLAAVRERILLFEPSAQYRAASWILVGLLRPELLTDDTFAFRRAARRIREYVTALEKLREGDTLADRERRKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREELDEMATKLRTEARGLSVNPSGTVVSRSVRMVNSMATPFNTKKGDVFR
Sbjct: 1 MSDPLDGLFGDLPSTTREASSSQRPAPQHEQSKAQEQRLRQKRAATAPGSSVDNEQAKEMVHGPEAKRAREKEGCPSPPMAVSEPKTLELHEALQKITRALTSPKLEKSRKAMGLLTKLLTAEMNTENASQFHAALGFFMASEGVWERLLGPGAEDRALAHALLAAVRERILLFEPSAQYRAASWILVGLLRPELLTDDTFAFRRAARRIREYVTALEKLREGDTLADRERRKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREELDEMATKLRTEARGLSVNPSGTVVSRSVRMVNSMATPFNTKKGDVFR 323
BLAST of EWM26368.1 vs. NCBI_GenBank
Match: gi|635367635|emb|CCI44152.1| (unnamed protein product [Albugo candida] >gi|635369214|emb|CCI42689.1| unnamed protein product [Albugo candida]) HSP 1 Score: 87.0409 bits (214), Expect = 9.090e-16 Identity = 76/268 (28.36%), Postives = 125/268 (46.64%), Query Frame = 0
Query: 59 EMVHGPEAKRAREKEG--CPS--------PPMAVSEPKTL----ELHEALQKITRALTSPKLEKSRKAMGLLTKLLTAEMNTENASQFHAALGFFMASEGVWERLLGPGAEDRALAHALLAAVRERILLFEPSAQYRAASWILVGLLRPELLTDDTFAFRRAARRIREYVTAL--EKLREGDTLADRERRKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREELDEMATKLRTEARGLSVNPSGTVVSRSVRMVNSM 310
++ HG E A + CPS P + S+ K L +L +L K+ R + S + KA L +L+ + + ASQF A + FM E LL + AL + +R+ L S + +W L + +LLTDDT+ F RA + IRE V + + LR+ D D E ++ L+T +K++ SWAK ++E + KR FPE++REELD ++ + + + + R+++ +SM
Sbjct: 59 DLYHGLELPNAENRPAPVCPSSNPVVNPLPDKSTSKRKRLTEDFDLEVSLNKLQRCMKST--SRFPKASELFCQLMDRHFDCDTASQFSACIDTFMTHE-----LLAKWSGSLALNRLITRILRDENALHLTSESTK--NWTLAAITHYDLLTDDTYVFVRATKVIRERVENITEKSLRQDD---DSELH-LLMPILKTLVKKHTISWAKTAVESVVSVATSKRAYFPEKQREELDGWTACIQNRNNAVDIQRCSS-LRRNIKEQDSM 312
BLAST of EWM26368.1 vs. NCBI_GenBank
Match: gi|298709409|emb|CBJ49222.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 87.8113 bits (216), Expect = 1.195e-15 Identity = 60/174 (34.48%), Postives = 84/174 (48.28%), Query Frame = 0
Query: 176 PSAQYRAASWILVGLLRPELLTDDTFAFRRAARRIREYVTALEKLREGDTLADR-----------------------ERRKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEE-REELDEMATKLRTEARGLSVNPSGTVV--SRSVRMVNSMATPFNTKKGDVFR 323
PS RA +W L+ LR + TDD+F F RA +R+RE + AL + G D ER+ A++ ++ A K +WA++SIE FKA A++R FPE + R+ LD+ + R NP G + SRSVR NS A P K+ DV R
Sbjct: 316 PSEGVRAVTWELLFGLRHDTKTDDSFTFARAIKRLREAIEALGGVTGGGKATDGTAGEGDDGEGTGSAGGNRVSLSLERKTALILVMKEAFKSYHLAWARSSIEPAFKAAADRRRLFPEGDLRDTLDDFTDAITKRQR----NPGGLMAPPSRSVRAHNSTAHPMLNKRSDVIR 485
BLAST of EWM26368.1 vs. NCBI_GenBank
Match: gi|325190229|emb|CCA24706.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 72.7886 bits (177), Expect = 4.822e-11 Identity = 57/200 (28.50%), Postives = 93/200 (46.50%), Query Frame = 0
Query: 86 KTLELHEALQKITRALTSPKLEKSRKAMGLLTKLLTAEMNTENASQFHAALGFFMASEGV--WERLLGPGAEDRALAHALLAAVRERILLFEPSAQYRAA---SWILVGLLRPELLTDDTFAFRRAARRIREYVTALEKLREGDTL-ADRERRKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREELDE 279
K +L +L K+ R + SP + KA L +L+ + +N SQF A + FM + V W L L + RIL + S A +W + +L TDDT+ F RA + IRE E + E ++ + +++ ++T +K++ WAK ++E + KR FPE++R+ELDE
Sbjct: 49 KDFDLDFSLLKLQRCMKSP--SRFPKASELFCQLMDSHLNANTTSQFSACVHTFMTQDLVAKWSGSLA------------LYKLTVRILKDKKSLHVDAGVAKNWTFAAITHYDLHTDDTYVFARATKVIRERA---ENITEKSFYQGEKCELELLMSLIKTLVKKHSILWAKTAVESVVSVATSKRAYFPEKQRQELDE 231
BLAST of EWM26368.1 vs. NCBI_GenBank
Match: gi|1173933823|gb|OQR85396.1| (hypothetical protein ACHHYP_11884 [Achlya hypogyna]) HSP 1 Score: 67.0106 bits (162), Expect = 4.387e-9 Identity = 36/99 (36.36%), Postives = 53/99 (53.54%), Query Frame = 0
Query: 184 SWILVGLLRPELLTDDTFAFRRAARRIREYVT----ALEKLREGDTLADRERRKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREELD 278
+W+L +L EL TDD+F F +AA+ I ++ +E E D KA+ CLRT + ++ SWAK S+E + R+ FPEE R E+D
Sbjct: 153 NWVLTSVLHNELFTDDSFGFAKAAKAISTHLDRRSHGVENANELDVAG---LDKALFPCLRTLMTRHSTSWAKTSVELVMNRLTATRMSFPEELRAEID 248
BLAST of EWM26368.1 vs. NCBI_GenBank
Match: gi|813127318|ref|XP_012197307.1| (hypothetical protein SPRG_03340 [Saprolegnia parasitica CBS 223.65] >gi|641538289|gb|KDO32123.1| hypothetical protein SPRG_03340 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 65.0846 bits (157), Expect = 2.067e-8 Identity = 68/240 (28.33%), Postives = 105/240 (43.75%), Query Frame = 0
Query: 65 EAKRAREKEGCPSPPM---AVSEP------------KTLELHEALQKITRALTSPKLEKSRKAMGLLTKLLTAEMNTENASQFHAALGFFMASEGVWE----RLLGPGAEDRALAHALLAAVRERILLFEPSAQYRAAS---WILVGLLRPELLTDDTFAFRRAARRIREYVT----ALEKLREGDTLADRERRKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREELD 278
+AKR RE+ P P+ EP L+L + + KI + K K KA L KLL E + + S+ A +GV E R+ A + A +L R+ L E + +Y A + W+L +L +L TDDT+ F +A + + ++ ++ +GD A K + CLRT + ++ SWAK S+E + RL FPE R E+D
Sbjct: 17 QAKRPREEGDEPRQPVPKRVTVEPTPSPPSPKPAAKPALDLFQTIDKIKGYMMVDK--KFAKASVLFGKLLVEECSVRSPSE-DVMTALLDAIKGVMEAKADRIHHVDARNEFKALMMLVD-SHRVALLE-APEYEADTIDNWVLDAVLHNDLFTDDTYRFAKATKALATHLDRRDEGVDSKNDGDVDA---LDKVLFPCLRTLMARHATSWAKTSVELVMHRLTATRLKFPEAYRNEID 248
BLAST of EWM26368.1 vs. NCBI_GenBank
Match: gi|673045413|ref|XP_008876667.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574467701|gb|ETV94723.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 64.6994 bits (156), Expect = 3.051e-8 Identity = 33/103 (32.04%), Postives = 62/103 (60.19%), Query Frame = 0
Query: 184 SWILVGLLRPELLTDDTFAFRRAARRIREYVTAL-EKLREGDTLADRER-RKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREELDEMATKL 284
+W+L ++ +L TDD+F F +AA+++ ++T ++ D LAD +A+L CLR+ + ++ +WAK S+E + +RL F E +R+ +DE +K+
Sbjct: 170 NWVLNAVVHNDLFTDDSFMFAKAAKQVAGHITDRRDEAVSMDNLADVAALDRALLPCLRSLMARHGVAWAKTSVEMVMALCTARRLTFSEVDRKHIDEWTSKI 272
BLAST of EWM26368.1 vs. NCBI_GenBank
Match: gi|673045415|ref|XP_008876668.1| (hypothetical protein H310_11690 [Aphanomyces invadans] >gi|574467700|gb|ETV94722.1| hypothetical protein H310_11690 [Aphanomyces invadans]) HSP 1 Score: 64.6994 bits (156), Expect = 3.263e-8 Identity = 33/103 (32.04%), Postives = 62/103 (60.19%), Query Frame = 0
Query: 184 SWILVGLLRPELLTDDTFAFRRAARRIREYVTAL-EKLREGDTLADRER-RKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREELDEMATKL 284
+W+L ++ +L TDD+F F +AA+++ ++T ++ D LAD +A+L CLR+ + ++ +WAK S+E + +RL F E +R+ +DE +K+
Sbjct: 170 NWVLNAVVHNDLFTDDSFMFAKAAKQVAGHITDRRDEAVSMDNLADVAALDRALLPCLRSLMARHGVAWAKTSVEMVMALCTARRLTFSEVDRKHIDEWTSKI 272
BLAST of EWM26368.1 vs. NCBI_GenBank
Match: gi|669165364|ref|XP_008618244.1| (hypothetical protein SDRG_13921 [Saprolegnia diclina VS20] >gi|530730132|gb|EQC28374.1| hypothetical protein SDRG_13921 [Saprolegnia diclina VS20]) HSP 1 Score: 62.7734 bits (151), Expect = 1.186e-7 Identity = 65/228 (28.51%), Postives = 100/228 (43.86%), Query Frame = 0
Query: 64 PEAKRAREKEGCPSPPMAVSEPKTLELHEALQKITRALTSPKLEKSRKAMGLLTKLLTAEMNTENASQ-----FHAALGFFMASEGVWERLLGPGAEDRALAHALLAAVRERILLFEPSAQYRAAS---WILVGLLRPELLTDDTFAFRRAARRIREYVT----ALEKLREGDTLA-DRERRKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREELD 278
P AKRA + P + L+L + + KI + K K KA L KLL E + + S A+ M ++ +R+ A + A LL LL P +Y A + W+L +L +L TDDT+ F +A + + ++ +E +GD A DR + CLRT + ++ SWAK ++E + RL FPE R E+D
Sbjct: 31 PAAKRAAIEPTPSPPSPKPAAKPALDLFQTIDKIKGYMMVDK--KFAKASVLFGKLLVEECSVRSPSDEVMTALLDAIKDVMDAKA--DRIHHVDARNEFKALVLLVDAHRAALLTAP--EYEADTLDNWVLDAVLHNDLFTDDTYRFAKATKALASHLDRRDEGVESKNDGDVDALDR----VLFPCLRTLMARHTTSWAKTAVELVMHRLTATRLTFPEAYRNEID 248
BLAST of EWM26368.1 vs. NCBI_GenBank
Match: gi|922858366|gb|KOO26509.1| (hypothetical protein Ctob_006526 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 62.3882 bits (150), Expect = 2.050e-7 Identity = 43/124 (34.68%), Postives = 65/124 (52.42%), Query Frame = 0
Query: 163 LLAAVRERILLFEPSAQYRAASWILVGLLRPELLTDDTFAFRRAARRIREYVTALEKLR-----EGDT-LADRERR---KAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREEL 277
L AA R LF SAQ W L+ L + +L TDD+F F +AA+++RE + L + G T L ERR + CL A+ + H+WA+ + + L KA ++R + EE++ EL
Sbjct: 125 LYAAAISRASLFSASAQQELKRWQLLVLTQIDLHTDDSFQFNKAAKQVREKLEELPCIYPALEPAGVTHLPPSERRAWADVLFECLDAAMSHHKHAWARPTCDTLIKAAIDRRQNWVEEQQSEL 248 The following BLAST results are available for this feature:
BLAST of EWM26368.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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