EWM26368.1, cds4319 (CDS) Nannochloropsis gaditana

Overview
NameEWM26368.1
Unique Namecds4319
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:308752..309723 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26368.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100031g4.2251.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:308752..309723 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM26368.1 vs. NCBI_GenBank
Match: gi|585108378|gb|EWM26368.1| (hypothetical protein Naga_100031g4 [Nannochloropsis gaditana])

HSP 1 Score: 653.284 bits (1684), Expect = 0.000e+0
Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0
Query:    1 MSDPLDGLFGDLPSTTREASSSQRPAPQHEQSKAQEQRLRQKRAATAPGSSVDNEQAKEMVHGPEAKRAREKEGCPSPPMAVSEPKTLELHEALQKITRALTSPKLEKSRKAMGLLTKLLTAEMNTENASQFHAALGFFMASEGVWERLLGPGAEDRALAHALLAAVRERILLFEPSAQYRAASWILVGLLRPELLTDDTFAFRRAARRIREYVTALEKLREGDTLADRERRKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREELDEMATKLRTEARGLSVNPSGTVVSRSVRMVNSMATPFNTKKGDVFR 323
            MSDPLDGLFGDLPSTTREASSSQRPAPQHEQSKAQEQRLRQKRAATAPGSSVDNEQAKEMVHGPEAKRAREKEGCPSPPMAVSEPKTLELHEALQKITRALTSPKLEKSRKAMGLLTKLLTAEMNTENASQFHAALGFFMASEGVWERLLGPGAEDRALAHALLAAVRERILLFEPSAQYRAASWILVGLLRPELLTDDTFAFRRAARRIREYVTALEKLREGDTLADRERRKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREELDEMATKLRTEARGLSVNPSGTVVSRSVRMVNSMATPFNTKKGDVFR
Sbjct:    1 MSDPLDGLFGDLPSTTREASSSQRPAPQHEQSKAQEQRLRQKRAATAPGSSVDNEQAKEMVHGPEAKRAREKEGCPSPPMAVSEPKTLELHEALQKITRALTSPKLEKSRKAMGLLTKLLTAEMNTENASQFHAALGFFMASEGVWERLLGPGAEDRALAHALLAAVRERILLFEPSAQYRAASWILVGLLRPELLTDDTFAFRRAARRIREYVTALEKLREGDTLADRERRKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREELDEMATKLRTEARGLSVNPSGTVVSRSVRMVNSMATPFNTKKGDVFR 323          
BLAST of EWM26368.1 vs. NCBI_GenBank
Match: gi|635367635|emb|CCI44152.1| (unnamed protein product [Albugo candida] >gi|635369214|emb|CCI42689.1| unnamed protein product [Albugo candida])

HSP 1 Score: 87.0409 bits (214), Expect = 9.090e-16
Identity = 76/268 (28.36%), Postives = 125/268 (46.64%), Query Frame = 0
Query:   59 EMVHGPEAKRAREKEG--CPS--------PPMAVSEPKTL----ELHEALQKITRALTSPKLEKSRKAMGLLTKLLTAEMNTENASQFHAALGFFMASEGVWERLLGPGAEDRALAHALLAAVRERILLFEPSAQYRAASWILVGLLRPELLTDDTFAFRRAARRIREYVTAL--EKLREGDTLADRERRKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREELDEMATKLRTEARGLSVNPSGTVVSRSVRMVNSM 310
            ++ HG E   A  +    CPS        P  + S+ K L    +L  +L K+ R + S    +  KA  L  +L+    + + ASQF A +  FM  E     LL   +   AL   +   +R+   L   S   +  +W L  +   +LLTDDT+ F RA + IRE V  +  + LR+ D   D E    ++  L+T +K++  SWAK ++E +      KR  FPE++REELD     ++     + +    + + R+++  +SM
Sbjct:   59 DLYHGLELPNAENRPAPVCPSSNPVVNPLPDKSTSKRKRLTEDFDLEVSLNKLQRCMKST--SRFPKASELFCQLMDRHFDCDTASQFSACIDTFMTHE-----LLAKWSGSLALNRLITRILRDENALHLTSESTK--NWTLAAITHYDLLTDDTYVFVRATKVIRERVENITEKSLRQDD---DSELH-LLMPILKTLVKKHTISWAKTAVESVVSVATSKRAYFPEKQREELDGWTACIQNRNNAVDIQRCSS-LRRNIKEQDSM 312          
BLAST of EWM26368.1 vs. NCBI_GenBank
Match: gi|298709409|emb|CBJ49222.1| (expressed unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 87.8113 bits (216), Expect = 1.195e-15
Identity = 60/174 (34.48%), Postives = 84/174 (48.28%), Query Frame = 0
Query:  176 PSAQYRAASWILVGLLRPELLTDDTFAFRRAARRIREYVTALEKLREGDTLADR-----------------------ERRKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEE-REELDEMATKLRTEARGLSVNPSGTVV--SRSVRMVNSMATPFNTKKGDVFR 323
            PS   RA +W L+  LR +  TDD+F F RA +R+RE + AL  +  G    D                        ER+ A++  ++ A K    +WA++SIE  FKA A++R  FPE + R+ LD+    +    R    NP G +   SRSVR  NS A P   K+ DV R
Sbjct:  316 PSEGVRAVTWELLFGLRHDTKTDDSFTFARAIKRLREAIEALGGVTGGGKATDGTAGEGDDGEGTGSAGGNRVSLSLERKTALILVMKEAFKSYHLAWARSSIEPAFKAAADRRRLFPEGDLRDTLDDFTDAITKRQR----NPGGLMAPPSRSVRAHNSTAHPMLNKRSDVIR 485          
BLAST of EWM26368.1 vs. NCBI_GenBank
Match: gi|325190229|emb|CCA24706.1| (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 72.7886 bits (177), Expect = 4.822e-11
Identity = 57/200 (28.50%), Postives = 93/200 (46.50%), Query Frame = 0
Query:   86 KTLELHEALQKITRALTSPKLEKSRKAMGLLTKLLTAEMNTENASQFHAALGFFMASEGV--WERLLGPGAEDRALAHALLAAVRERILLFEPSAQYRAA---SWILVGLLRPELLTDDTFAFRRAARRIREYVTALEKLREGDTL-ADRERRKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREELDE 279
            K  +L  +L K+ R + SP   +  KA  L  +L+ + +N    SQF A +  FM  + V  W   L             L  +  RIL  + S    A    +W    +   +L TDDT+ F RA + IRE     E + E      ++   + +++ ++T +K++   WAK ++E +      KR  FPE++R+ELDE
Sbjct:   49 KDFDLDFSLLKLQRCMKSP--SRFPKASELFCQLMDSHLNANTTSQFSACVHTFMTQDLVAKWSGSLA------------LYKLTVRILKDKKSLHVDAGVAKNWTFAAITHYDLHTDDTYVFARATKVIRERA---ENITEKSFYQGEKCELELLMSLIKTLVKKHSILWAKTAVESVVSVATSKRAYFPEKQRQELDE 231          
BLAST of EWM26368.1 vs. NCBI_GenBank
Match: gi|1173933823|gb|OQR85396.1| (hypothetical protein ACHHYP_11884 [Achlya hypogyna])

HSP 1 Score: 67.0106 bits (162), Expect = 4.387e-9
Identity = 36/99 (36.36%), Postives = 53/99 (53.54%), Query Frame = 0
Query:  184 SWILVGLLRPELLTDDTFAFRRAARRIREYVT----ALEKLREGDTLADRERRKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREELD 278
            +W+L  +L  EL TDD+F F +AA+ I  ++      +E   E D        KA+  CLRT + ++  SWAK S+E +       R+ FPEE R E+D
Sbjct:  153 NWVLTSVLHNELFTDDSFGFAKAAKAISTHLDRRSHGVENANELDVAG---LDKALFPCLRTLMTRHSTSWAKTSVELVMNRLTATRMSFPEELRAEID 248          
BLAST of EWM26368.1 vs. NCBI_GenBank
Match: gi|813127318|ref|XP_012197307.1| (hypothetical protein SPRG_03340 [Saprolegnia parasitica CBS 223.65] >gi|641538289|gb|KDO32123.1| hypothetical protein SPRG_03340 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 65.0846 bits (157), Expect = 2.067e-8
Identity = 68/240 (28.33%), Postives = 105/240 (43.75%), Query Frame = 0
Query:   65 EAKRAREKEGCPSPPM---AVSEP------------KTLELHEALQKITRALTSPKLEKSRKAMGLLTKLLTAEMNTENASQFHAALGFFMASEGVWE----RLLGPGAEDRALAHALLAAVRERILLFEPSAQYRAAS---WILVGLLRPELLTDDTFAFRRAARRIREYVT----ALEKLREGDTLADRERRKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREELD 278
            +AKR RE+   P  P+      EP              L+L + + KI   +   K  K  KA  L  KLL  E +  + S+         A +GV E    R+    A +   A  +L     R+ L E + +Y A +   W+L  +L  +L TDDT+ F +A + +  ++      ++   +GD  A     K +  CLRT + ++  SWAK S+E +       RL FPE  R E+D
Sbjct:   17 QAKRPREEGDEPRQPVPKRVTVEPTPSPPSPKPAAKPALDLFQTIDKIKGYMMVDK--KFAKASVLFGKLLVEECSVRSPSE-DVMTALLDAIKGVMEAKADRIHHVDARNEFKALMMLVD-SHRVALLE-APEYEADTIDNWVLDAVLHNDLFTDDTYRFAKATKALATHLDRRDEGVDSKNDGDVDA---LDKVLFPCLRTLMARHATSWAKTSVELVMHRLTATRLKFPEAYRNEID 248          
BLAST of EWM26368.1 vs. NCBI_GenBank
Match: gi|673045413|ref|XP_008876667.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574467701|gb|ETV94723.1| hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 64.6994 bits (156), Expect = 3.051e-8
Identity = 33/103 (32.04%), Postives = 62/103 (60.19%), Query Frame = 0
Query:  184 SWILVGLLRPELLTDDTFAFRRAARRIREYVTAL-EKLREGDTLADRER-RKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREELDEMATKL 284
            +W+L  ++  +L TDD+F F +AA+++  ++T   ++    D LAD     +A+L CLR+ + ++  +WAK S+E +      +RL F E +R+ +DE  +K+
Sbjct:  170 NWVLNAVVHNDLFTDDSFMFAKAAKQVAGHITDRRDEAVSMDNLADVAALDRALLPCLRSLMARHGVAWAKTSVEMVMALCTARRLTFSEVDRKHIDEWTSKI 272          
BLAST of EWM26368.1 vs. NCBI_GenBank
Match: gi|673045415|ref|XP_008876668.1| (hypothetical protein H310_11690 [Aphanomyces invadans] >gi|574467700|gb|ETV94722.1| hypothetical protein H310_11690 [Aphanomyces invadans])

HSP 1 Score: 64.6994 bits (156), Expect = 3.263e-8
Identity = 33/103 (32.04%), Postives = 62/103 (60.19%), Query Frame = 0
Query:  184 SWILVGLLRPELLTDDTFAFRRAARRIREYVTAL-EKLREGDTLADRER-RKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREELDEMATKL 284
            +W+L  ++  +L TDD+F F +AA+++  ++T   ++    D LAD     +A+L CLR+ + ++  +WAK S+E +      +RL F E +R+ +DE  +K+
Sbjct:  170 NWVLNAVVHNDLFTDDSFMFAKAAKQVAGHITDRRDEAVSMDNLADVAALDRALLPCLRSLMARHGVAWAKTSVEMVMALCTARRLTFSEVDRKHIDEWTSKI 272          
BLAST of EWM26368.1 vs. NCBI_GenBank
Match: gi|669165364|ref|XP_008618244.1| (hypothetical protein SDRG_13921 [Saprolegnia diclina VS20] >gi|530730132|gb|EQC28374.1| hypothetical protein SDRG_13921 [Saprolegnia diclina VS20])

HSP 1 Score: 62.7734 bits (151), Expect = 1.186e-7
Identity = 65/228 (28.51%), Postives = 100/228 (43.86%), Query Frame = 0
Query:   64 PEAKRAREKEGCPSPPMAVSEPKTLELHEALQKITRALTSPKLEKSRKAMGLLTKLLTAEMNTENASQ-----FHAALGFFMASEGVWERLLGPGAEDRALAHALLAAVRERILLFEPSAQYRAAS---WILVGLLRPELLTDDTFAFRRAARRIREYVT----ALEKLREGDTLA-DRERRKAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREELD 278
            P AKRA  +     P    +    L+L + + KI   +   K  K  KA  L  KLL  E +  + S         A+   M ++   +R+    A +   A  LL       LL  P  +Y A +   W+L  +L  +L TDDT+ F +A + +  ++      +E   +GD  A DR     +  CLRT + ++  SWAK ++E +       RL FPE  R E+D
Sbjct:   31 PAAKRAAIEPTPSPPSPKPAAKPALDLFQTIDKIKGYMMVDK--KFAKASVLFGKLLVEECSVRSPSDEVMTALLDAIKDVMDAKA--DRIHHVDARNEFKALVLLVDAHRAALLTAP--EYEADTLDNWVLDAVLHNDLFTDDTYRFAKATKALASHLDRRDEGVESKNDGDVDALDR----VLFPCLRTLMARHTTSWAKTAVELVMHRLTATRLTFPEAYRNEID 248          
BLAST of EWM26368.1 vs. NCBI_GenBank
Match: gi|922858366|gb|KOO26509.1| (hypothetical protein Ctob_006526 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 62.3882 bits (150), Expect = 2.050e-7
Identity = 43/124 (34.68%), Postives = 65/124 (52.42%), Query Frame = 0
Query:  163 LLAAVRERILLFEPSAQYRAASWILVGLLRPELLTDDTFAFRRAARRIREYVTALEKLR-----EGDT-LADRERR---KAILACLRTALKQNFHSWAKASIEELFKATAEKRLCFPEEEREEL 277
            L AA   R  LF  SAQ     W L+ L + +L TDD+F F +AA+++RE +  L  +       G T L   ERR     +  CL  A+  + H+WA+ + + L KA  ++R  + EE++ EL
Sbjct:  125 LYAAAISRASLFSASAQQELKRWQLLVLTQIDLHTDDSFQFNKAAKQVREKLEELPCIYPALEPAGVTHLPPSERRAWADVLFECLDAAMSHHKHAWARPTCDTLIKAAIDRRQNWVEEQQSEL 248          
The following BLAST results are available for this feature:
BLAST of EWM26368.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108378|gb|EWM26368.1|0.000e+0100.00hypothetical protein Naga_100031g4 [Nannochloropsi... [more]
gi|635367635|emb|CCI44152.1|9.090e-1628.36unnamed protein product [Albugo candida] >gi|63536... [more]
gi|298709409|emb|CBJ49222.1|1.195e-1534.48expressed unknown protein [Ectocarpus siliculosus][more]
gi|325190229|emb|CCA24706.1|4.822e-1128.50conserved hypothetical protein [Albugo laibachii N... [more]
gi|1173933823|gb|OQR85396.1|4.387e-936.36hypothetical protein ACHHYP_11884 [Achlya hypogyna... [more]
gi|813127318|ref|XP_012197307.1|2.067e-828.33hypothetical protein SPRG_03340 [Saprolegnia paras... [more]
gi|673045413|ref|XP_008876667.1|3.051e-832.04hypothetical protein, variant [Aphanomyces invadan... [more]
gi|673045415|ref|XP_008876668.1|3.263e-832.04hypothetical protein H310_11690 [Aphanomyces invad... [more]
gi|669165364|ref|XP_008618244.1|1.186e-728.51hypothetical protein SDRG_13921 [Saprolegnia dicli... [more]
gi|922858366|gb|KOO26509.1|2.050e-734.68hypothetical protein Ctob_006526 [Chrysochromulina... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4329rna4329Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications