rna4321, rna4321 (mRNA) Nannochloropsis gaditana

Overview
Namerna4321
Unique Namerna4321
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length294
Alignment locationCM002463.1:288011..288863 -

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Properties
Property NameValue
Productdiphthamide biosynthesis protein 3
Orig transcript idgnl|cribi|Naga_100031g13.2236.mrna
Orig protein idgnl|cribi|Naga_100031g13.2236
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:288011..288863 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100031g13gene4164Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4321rna4321-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26353.1cds4311Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4321 ID=rna4321|Name=rna4321|organism=Nannochloropsis gaditana|type=mRNA|length=294bp
ATGCTCACCCCTCAGGGCAATAGATTCCTGACGGAGTTGCCAAGGCCACA
GTTGGGCATTATCAGTCGTCATGACTGTCAACCATCCACTTTACCCCATG
TGAGGGTGTCCATCCCTCTACGCGGTGTGCCCGCCCGCGGCGTGGTGACT
TGCCTCGGTGAATGGCGCAGACCCCACCAGGACCTGGGTGTCTGTGTCAT
AACAGGCATGCGGGGCCAGCACTGCCGTCTTGTTGCTACGCATTTTCACC
CATCAAATATGCTACTACGGCGATGCCGAAGGCCTTATCTATAG
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protein sequence of rna4321

>rna4321-protein ID=rna4321-protein|Name=rna4321|organism=Nannochloropsis gaditana|type=polypeptide|length=144bp
MGERLGQGASVHTINDGACAGVYFHSGRPFSSVAWRRVRKAGPRSNSWLF
FEDLSAHISKMSIYEEVEIEDMDFEEEEQHYTYPCPCGDKFVITLAELWD
GEDVAPCPSCTLRIRVVYEEEALPPLKASEAGGSAGAGMAVAVH
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mRNA from alignment at CM002463.1:288011..288863-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4321 ID=rna4321|Name=rna4321|organism=Nannochloropsis gaditana|type=mRNA|length=853bp|location=Sequence derived from alignment at CM002463.1:288011..288863- (Nannochloropsis gaditana)
ATGGGAGAAAGACTGGGACAGGGCGCAAGTGTGCACACGATCAATGGTGA
GGCCTAGCAGCCATCCACGTGCAAGAACAGAGGCTTAGGGGAGGCAAAGA
AGCCTCCCTGGCCCCCAACATTCACTTCAAAAACTACCAATACGTCTCGA
TTAATTTTACCCGCCAACTCGAGGTCTTTCACAACAATGGATCTTTTCAC
GTTGCGCATGTGGTTGGGTTTTTTGTGGTTTCCTAGACGGTGCTTGTGCA
GGCGTGTATTTTCACTCGGGGAGGCCTTTTTCTTCGGTGGCTTGGAGAAG
GGTTAGGAAAGCGGGTCCACGCTCAAATTCATGGCTCTTTTTTGAAGGTC
CGTGACGGCGCGACGGTGCCAGCTACTTTCCTCCTCCTGATGAGTGTGGA
GCGGAGTCAAGGCACATTTTTGGCCCGTTGCGATATGGAACACATTGTAT
ATTGTGTACTGATTTTGTAACCTTGGCTTTCTGGCGCAAGCTCGTCCGCG
CATACGCAATAAACTTTGTGTACAGCAATGAAATCGGACGGCTCATATCA
CTACTGCCCCATTTTTTTTTAATAGACTTGTCGGCACACATATCGAAGAT
GAGCATCTACGAAGAGGTCGAAATAGAGGACATGGATTTTGAGGAAGAGG
AGCAGCACTACACTTATCCTTGCCCATGTGGTGACAAGTTCGTGATAACT
TTGGCAGAGCTCTGGGATGGAGAAGATGTAGCGCCTTGCCCCAGTTGCAC
GCTTCGCATCCGCGTCGTATACGAAGAGGAGGCCCTTCCCCCTTTAAAAG
CCAGCGAGGCAGGGGGCTCAGCGGGAGCCGGCATGGCGGTAGCAGTGCAC
TAG
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Coding sequence (CDS) from alignment at CM002463.1:288011..288863-

>rna4321 ID=rna4321|Name=rna4321|organism=Nannochloropsis gaditana|type=CDS|length=1305bp|location=Sequence derived from alignment at CM002463.1:288011..288863- (Nannochloropsis gaditana)
ACTTGTCGGCACACATATCGAAGATGAGCATCTACGAAGAGGTCGAAATA
GAGGACATGGATTTTGAGGAAGAGGAGCAGCACTACACTTATCCTTGCCC
ATGTGGTGACAAGTTCGTGATAACTTTGGCAGAGCTCTGGGATGGAGAAG
ATGTAGCGCCTTGCCCCAGTTGCACGCTTCGCATCCGCGTCGTATACGAA
GAGGAGGCCCTTCCCCCTTTAAAAGCCAGCGAGGCAGGGGGCTCAGCGGG
AGCCGGCATGGCGGTAGCAGTGCACTAGACGGTGCTTGTGCAGGCGTGTA
TTTTCACTCGGGGAGGCCTTTTTCTTCGGTGGCTTGGAGAAGGGTTAGGA
AAGCGGGTCCACGCTCAAATTCATGGCTCTTTTTTGAAGATGGGAGAAAG
ACTGGGACAGGGCGCAAGTGTGCACACGATCAATGACTTGTCGGCACACA
TATCGAAGATGAGCATCTACGAAGAGGTCGAAATAGAGGACATGGATTTT
GAGGAAGAGGAGCAGCACTACACTTATCCTTGCCCATGTGGTGACAAGTT
CGTGATAACTTTGGCAGAGCTCTGGGATGGAGAAGATGTAGCGCCTTGCC
CCAGTTGCACGCTTCGCATCCGCGTCGTATACGAAGAGGAGGCCCTTCCC
CCTTTAAAAGCCAGCGAGGCAGGGGGCTCAGCGGGAGCCGGCATGGCGGT
AGCAGTGCACTAGACGGTGCTTGTGCAGGCGTGTATTTTCACTCGGGGAG
GCCTTTTTCTTCGGTGGCTTGGAGAAGGGTTAGGAAAGCGGGTCCACGCT
CAAATTCATGGCTCTTTTTTGAAGATGGGAGAAAGACTGGGACAGGGCGC
AAGTGTGCACACGATCAATGACTTGTCGGCACACATATCGAAGATGAGCA
TCTACGAAGAGGTCGAAATAGAGGACATGGATTTTGAGGAAGAGGAGCAG
CACTACACTTATCCTTGCCCATGTGGTGACAAGTTCGTGATAACTTTGGC
AGAGCTCTGGGATGGAGAAGATGTAGCGCCTTGCCCCAGTTGCACGCTTC
GCATCCGCGTCGTATACGAAGAGGAGGCCCTTCCCCCTTTAAAAGCCAGC
GAGGCAGGGGGCTCAGCGGGAGCCGGCATGGCGGTAGCAGTGCACTAGAC
GGTGCTTGTGCAGGCGTGTATTTTCACTCGGGGAGGCCTTTTTCTTCGGT
GGCTTGGAGAAGGGTTAGGAAAGCGGGTCCACGCTCAAATTCATGGCTCT
TTTTTGAAGATGGGAGAAAGACTGGGACAGGGCGCAAGTGTGCACACGAT
CAATG
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Synonyms
Publications