EWM26353.1, cds4311 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26353.1 vs. NCBI_GenBank
Match: gi|585108363|gb|EWM26353.1| (diphthamide biosynthesis protein 3 [Nannochloropsis gaditana]) HSP 1 Score: 299.286 bits (765), Expect = 6.637e-103 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
Query: 1 MGERLGQGASVHTINDGACAGVYFHSGRPFSSVAWRRVRKAGPRSNSWLFFEDLSAHISKMSIYEEVEIEDMDFEEEEQHYTYPCPCGDKFVITLAELWDGEDVAPCPSCTLRIRVVYEEEALPPLKASEAGGSAGAGMAVAVH 144
MGERLGQGASVHTINDGACAGVYFHSGRPFSSVAWRRVRKAGPRSNSWLFFEDLSAHISKMSIYEEVEIEDMDFEEEEQHYTYPCPCGDKFVITLAELWDGEDVAPCPSCTLRIRVVYEEEALPPLKASEAGGSAGAGMAVAVH
Sbjct: 1 MGERLGQGASVHTINDGACAGVYFHSGRPFSSVAWRRVRKAGPRSNSWLFFEDLSAHISKMSIYEEVEIEDMDFEEEEQHYTYPCPCGDKFVITLAELWDGEDVAPCPSCTLRIRVVYEEEALPPLKASEAGGSAGAGMAVAVH 144
BLAST of EWM26353.1 vs. NCBI_GenBank
Match: gi|1173949529|gb|OQR97555.1| (diphthamide biosynthesis protein [Achlya hypogyna]) HSP 1 Score: 108.997 bits (271), Expect = 1.465e-28 Identity = 47/73 (64.38%), Postives = 61/73 (83.56%), Query Frame = 0
Query: 61 MSIYEEVEIEDMDFEEEEQHYTYPCPCGDKFVITLAELWDGEDVAPCPSCTLRIRVVYEEEALPPLKASEAGG 133
MS+Y+EVEIEDM+F+E EQ Y YPCPCGDKF I L EL+DGED+A CPSC+L IR++++E+ALPPL+ + G
Sbjct: 1 MSVYDEVEIEDMEFDEAEQIYYYPCPCGDKFFIGLDELYDGEDIASCPSCSLTIRIIFDEDALPPLREDDEDG 73
BLAST of EWM26353.1 vs. NCBI_GenBank
Match: gi|223998808|ref|XP_002289077.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220976185|gb|EED94513.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 107.071 bits (266), Expect = 6.113e-28 Identity = 48/66 (72.73%), Postives = 54/66 (81.82%), Query Frame = 0
Query: 61 MSIYEEVEIEDMDFEEEEQHYTYPCPCGDKFVITLAELWDGEDVAPCPSCTLRIRVVYEEEALPPL 126
MSIYEEVE ED+D++ Q YTYPCPCGDKF ITL LWDGED+A CPSCTLRI ++YEE LPPL
Sbjct: 1 MSIYEEVEFEDLDYDPLTQTYTYPCPCGDKFSITLEALWDGEDIATCPSCTLRIEIIYEESDLPPL 66
BLAST of EWM26353.1 vs. NCBI_GenBank
Match: gi|219110459|ref|XP_002176981.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411516|gb|EEC51444.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 105.145 bits (261), Expect = 3.971e-27 Identity = 50/63 (79.37%), Postives = 55/63 (87.30%), Query Frame = 0
Query: 61 MSIYEEVEIEDMDFEEEEQHYTYPCPCGDKFVITLAELWDGEDVAPCPSCTLRIRVVYEEEAL 123
MSIYEEVEIEDM F+E+E YTYPCPCGDKF ITL ELW+GEDVA CPSCTLRI V++EEE L
Sbjct: 1 MSIYEEVEIEDMIFDEDELVYTYPCPCGDKFRITLEELWEGEDVAKCPSCTLRIMVIFEEEDL 63
BLAST of EWM26353.1 vs. NCBI_GenBank
Match: gi|673044757|ref|XP_008876339.1| (hypothetical protein H310_11430 [Aphanomyces invadans] >gi|574468146|gb|ETV95166.1| hypothetical protein H310_11430 [Aphanomyces invadans]) HSP 1 Score: 103.99 bits (258), Expect = 2.733e-26 Identity = 43/80 (53.75%), Postives = 60/80 (75.00%), Query Frame = 0
Query: 61 MSIYEEVEIEDMDFEEEEQHYTYPCPCGDKFVITLAELWDGEDVAPCPSCTLRIRVVYEEEALPPLKASEAGGSAGAGMA 140
MS Y+E+EIEDM+++E+EQ YTYPCPCGD F ITL +L+DG+D+ CPSC+L IRV+++E+ LP L+ E A +
Sbjct: 1 MSTYDEIEIEDMEYDEKEQIYTYPCPCGDNFFITLQDLYDGDDIGTCPSCSLTIRVIFDEDNLPELRDEEDDDCAVDDLV 80
BLAST of EWM26353.1 vs. NCBI_GenBank
Match: gi|1210528891|dbj|GAX12534.1| (diphthamide biosynthesis protein 3 [Fistulifera solaris]) HSP 1 Score: 102.834 bits (255), Expect = 5.761e-26 Identity = 48/60 (80.00%), Postives = 52/60 (86.67%), Query Frame = 0
Query: 61 MSIYEEVEIEDMDFEEEEQHYTYPCPCGDKFVITLAELWDGEDVAPCPSCTLRIRVVYEE 120
MSIYEEVEIEDM F+EE+ YTYPCPCGDKF ITL EL DGED+A CPSCTLRI V+YEE
Sbjct: 1 MSIYEEVEIEDMFFDEEQLVYTYPCPCGDKFRITLEELHDGEDIAKCPSCTLRIMVIYEE 60
BLAST of EWM26353.1 vs. NCBI_GenBank
Match: gi|698808714|ref|XP_009837386.1| (hypothetical protein H257_11993 [Aphanomyces astaci] >gi|574107670|gb|ETV73181.1| hypothetical protein H257_11993 [Aphanomyces astaci]) HSP 1 Score: 102.834 bits (255), Expect = 7.667e-26 Identity = 41/67 (61.19%), Postives = 57/67 (85.07%), Query Frame = 0
Query: 61 MSIYEEVEIEDMDFEEEEQHYTYPCPCGDKFVITLAELWDGEDVAPCPSCTLRIRVVYEEEALPPLK 127
MS+Y+E+EIEDM++ E+EQ YTYPCPCGD F ITL +L+DG+D+ CPSC+L IRV+++E+ LP L+
Sbjct: 1 MSVYDEIEIEDMEYNEKEQLYTYPCPCGDNFFITLQDLYDGDDIGSCPSCSLTIRVIFDEDNLPELR 67
BLAST of EWM26353.1 vs. NCBI_GenBank
Match: gi|397566088|gb|EJK44901.1| (hypothetical protein THAOC_36525 [Thalassiosira oceanica]) HSP 1 Score: 102.834 bits (255), Expect = 7.938e-26 Identity = 43/67 (64.18%), Postives = 55/67 (82.09%), Query Frame = 0
Query: 61 MSIYEEVEIEDMDFEEEEQHYTYPCPCGDKFVITLAELWDGEDVAPCPSCTLRIRVVYEEEALPPLK 127
MSIYEE+E ED++++ + Q YTYPCPCGD F I+L LWDGED+A CPSCTLRI ++Y+EE LP L+
Sbjct: 1 MSIYEEIEFEDLNYDPKTQMYTYPCPCGDMFSISLEALWDGEDIATCPSCTLRIEIIYDEEDLPELR 67
BLAST of EWM26353.1 vs. NCBI_GenBank
Match: gi|675209203|ref|XP_008913486.1| (hypothetical protein PPTG_17582 [Phytophthora parasitica INRA-310] >gi|566011902|gb|ETI34813.1| hypothetical protein F443_18751 [Phytophthora parasitica P1569] >gi|567949366|gb|ETK75098.1| hypothetical protein L915_18235 [Phytophthora parasitica] >gi|567978042|gb|ETL28536.1| hypothetical protein L916_18141 [Phytophthora parasitica] >gi|568007554|gb|ETL81791.1| hypothetical protein L917_17955 [Phytophthora parasitica] >gi|568037410|gb|ETM34995.1| hypothetical protein L914_18041 [Phytophthora parasitica] >gi|568086267|gb|ETN01159.1| hypothetical protein PPTG_17582 [Phytophthora parasitica INRA-310] >gi|570315606|gb|ETO63554.1| hypothetical protein F444_18751 [Phytophthora parasitica P1976] >gi|570939395|gb|ETP04652.1| hypothetical protein F441_18614 [Phytophthora parasitica CJ01A1] >gi|570969681|gb|ETP32800.1| hypothetical protein F442_18567 [Phytophthora parasitica P10297]) HSP 1 Score: 100.138 bits (248), Expect = 4.486e-25 Identity = 45/69 (65.22%), Postives = 56/69 (81.16%), Query Frame = 0
Query: 62 SIYEEVEIEDMDFEEEEQHYTYPCPCGDKFVITLAELWDGEDVAPCPSCTLRIRVVYEEEALPPLKASE 130
S+Y+EVEIEDM+F+ EEQ Y YPCPCGD+F I L EL+DGED+A CPSC+L IRV+++EE LP L E
Sbjct: 3 SVYDEVEIEDMEFDAEEQVYYYPCPCGDRFSIDLEELYDGEDIATCPSCSLTIRVIFDEENLPELAEEE 71
BLAST of EWM26353.1 vs. NCBI_GenBank
Match: gi|669139348|ref|XP_008605242.1| (hypothetical protein SDRG_01493 [Saprolegnia diclina VS20] >gi|530743286|gb|EQC41528.1| hypothetical protein SDRG_01493 [Saprolegnia diclina VS20]) HSP 1 Score: 99.3673 bits (246), Expect = 8.585e-25 Identity = 42/67 (62.69%), Postives = 56/67 (83.58%), Query Frame = 0
Query: 61 MSIYEEVEIEDMDFEEEEQHYTYPCPCGDKFVITLAELWDGEDVAPCPSCTLRIRVVYEEEALPPLK 127
MS+Y+E+EIEDM+F E++Q Y YPCPCGDKF I L EL DGED+A CPSC+L IR++++ +ALP L+
Sbjct: 1 MSVYDEIEIEDMEFNEDDQVYYYPCPCGDKFFIGLDELHDGEDIASCPSCSLTIRIIFDADALPELR 67 The following BLAST results are available for this feature:
BLAST of EWM26353.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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