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Properties
| Property Name | Value |
|---|
| Product | hsbp1-like protein |
| Orig transcript id | gnl|cribi|Naga_100003g50.1833.mrna |
| Orig protein id | gnl|cribi|Naga_100003g50.1833 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1074716..1075411 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna432 ID=rna432|Name=rna432|organism=Nannochloropsis gaditana|type=mRNA|length=3103bp
GAAGCAAGCATATATCGAATCCCAGGCGCAGTTAACATCGGGTCTCTGTC
TTTTTTCTAGGGGCCCACAGATGTACGCGTCGTAGAATGTTTTGCATTGC
CAGGGACGCACGGGACGGGCATCGACAAACTAGGATACTTGTCCGCTTTA
GCGCCACTCGGTCTGGCAGGCGTCAATAAGCTGTCAGGCCGGACAACAAT
CGTCGAGAAATGACTTCTGGTAGTACTGCTAAGGTCGGCTGCGATGGCCT
TGCGGTCTCGGACACACAGAGGGAGGGAACAATTGACTCGGCGAGTCTTT
CCTCCGCCCCCGACAAACTCGTTTCCCACAAGCCGCAGCGGCCCAAACCC
TCCTCATTTTCCAGCGTGGCGTCTGGATCGGGAAACACACCATTGACGTT
TCAGCAGCAATCTCTGGAAGAACTGGAGCGAGGCGAAAACTTGACTAGCC
CGTTTACGTCCCCAGCGGGGGCTTGGACAGACCACGCCTTCTTTGAGACC
CGTCCACTCCCACGCTCTCCTTTGCGGCACAGCCCCACCACTAAGGCAGG
AGACTCTCAAGACCCAACGATCACACCAGTATCTGCCGATTCAGACAGCG
CTTTCTTCGAGGCAGAATCAGGAAATCAGCCCTCGTCATCGCTCTCCTTC
TCCTCCTTCTCCTCCTCCCCTTCTACCTCTCCAAACCCGAACGGCGCGGC
AGTATCCTCCCCGTATGCATCAATTTCTGACTATGCAGCACCTGCTTACC
ACGGCATCGTGGAATGTACCACCCCGCCAACCCGATCGTTTCTGTCGGCC
GCCGCCACCCTTGTCAGGCCGCCCCCTCCCGGGTCAGGCGCTGTGCCCCC
CTTCCTGGACGACTTTGCCGCCGACTTTGGGGGAGTATCTGCAGAGATGG
AGACAGGCAAAGGCAAATCTCCCGGTTCGCTAAAGCAGCAGCAGCTTGAG
CTAGCTCTGGCTGAGGATGGCTTCCTGAGCTCGCCTGGTGGCAGCGAGGG
GGGGGAATCGTCCGGGAAGAGCGCCTGCCCCCCTTCCACCCCCACGTCCA
CCTCGGATCCCCCCCCCGAAGACCTGCTCTTCCTCTTCTCGCCCACGCTT
GTACACACGCCCTCTTCCCGTGCGGCCACGCCCAGGAGCACCCCGCGGCA
CACGACCAGGCGGCGCCTGTCCATGCCGGGCCTGCCTTTTCGAGCCACCC
CTCGCAGCACCGGCAGCAAGGCTCCCGTCACGGCTAGCGCAAGGGGCACT
GGTATTCTCTCGCTGGACTCGATTCGAGTCAAGTTGGCCACAGGCTTGAC
CCCCCGGAGCACCCTCTCCGAGTACGTCCCTGTCCACCTTTCCCCCACGC
TCGCCAAAGCCCAGGAGCAGGAGCACGTGGACGCGCCGGACGGGGAGGAT
ATCCTGCTAGTACAGTCTGCCCACCGGCTCGGCCTCGACATCACCGGCTT
GCGCAAAGCCCTCCTTGTGCGCATACTAGGCGTTGAGCCGACCCCCCCCG
GTCCTACGTCTCCCCCCTCTCCTCCCCCCCTCTCCCCCGCGACACTTCTC
TTTGGATCCGCTCGGAAGCAGACTATCGCGCATACATTTTCTGGCTCTGT
TAGTCCGGCCCGGCCTACAACCAAGCGCACACGCAGTGCCTCGGCCGGCG
TCATGCCCACAGGATGGCTGAGGCGCGCTGCCGGTGGGCAAAGCCACCTC
GGTGAGGGGCGCGGGGGAAAGACGGGGAAGAGGGTCTCGGAGACGTATCA
ATTCGTTTTGTGGGTACTGGACCTGGAGAGCGGGGAGGAGTGGCGCGTCC
GCAAAGGCCCTTCGGAAATGTTGGCGTTACATGAGGCTGTGTCCGCGATG
CGCCCCGGTAGTTTGGGGATTGATGGCGTCAAATTCCCGCTTAAGCGACA
CAAGAGTGAGACAAACCCTCCCAGCTTGGAGAAGCAAGCACGGCTCGAAG
AGTACTTACGGCGGCTGACGGGAGTTTCGAGTTCTCACTCCATGGTCTCC
TCCTCTCCTCCCTCGCCCTTGGGAGCGGCTGCGAGGCCGGCCGTGCCGTC
GCAGGAGACAGATTATGAGGTTGCGAAGGTTCTTCAGGACTTCTTGGGCG
CCACAGAGCGCGTGGATGAGCTAACAACGATGGCGCATACCGTCGGCAAA
GGGGATCCGCAAAGACGTCTGCGGCGACAAATTCAGCTCCCGACAGCTTC
TGGACACGGTGCCTTTCGGTGGCAGTTTGCGGGACATGGCGCGCACCACC
TTGACGTCTCCTAGCATGGCGAGTGGAAGCGGGGAGGTGGGAGAGGCAGA
GGTGGACCGGTTCTGTCTGGCAGAGATCAGACGTGTGTTGGAGGCAGAGA
CCTTCCTCCCTCTGCGGCTCCGGTTGTATGAGCGAGTAATGGTGGAGACA
AACATTGAAGAGGAGAAGCGGCTGGCGCAGAAGTGTGCAATATTCCAAGC
TCGACCCCAGTCCTTCTTCGGAATTGCGGTGGGAAACATTTCCATAAGTT
CGTGGGAGGCGGCTGTAGGTCATCTACGCCGATTGAGTGGGGAGATCACA
ACCCTACCTTCGGATAAGTTAGATGCACTGGTGGCTGCGGTCAAGGAAAT
CCACGCCTGCCATCGCCGAGAGCATGGGGAGGCCGCGGATCTGCACTTAG
GAGCAGACGAGTTTTTACCCGTGTTCATCTATGTGGTGAGTCAGTGTGGA
ATCTCACGGTTGCTAGCTTTGAAGAATATGCTGGCAGCTCTGGGTGATCC
TGCAAGGATGATGTCAGAGGCAGGATACTGTCTTGCCTCCTTGGAGGGCG
CCATCGAGTACCTGCTACAACTTGAGGACACGGCCGAAGAAATTTGATCC
CGATCTACGAAATGCCTACCTCGGTAAGGTTGCAGGACATAAATTGTATC
GCTGATAGCCTTCTTTTTCGACTAACTTACTACAACGAGTGTACAGTCGC
TTTGCATGCGCGTGTATATGTATCACTAGGAGTGGACCATGTAAAGTCCT
ACATAACCAACCTTTAAAACGTGATGGAAAGACAGTACAAGCAAAGCATT
GCTGTGGCCTACACATCTCCAATGGGATTCTTGCATATTCTACTTTCATT
TCG back to topprotein sequence of rna432 >rna432-protein ID=rna432-protein|Name=rna432|organism=Nannochloropsis gaditana|type=polypeptide|length=149bp
MSSSRPTSTTTSGVGSKGGQSSKPKSDTPSSAAPVLSKCDPNIPTSSSDC
LGSAIQLPHGEPQGHLARQDDPARYVRSLLDDMQSRFENMSQQILSKIDT
FGSKVDALEAEISELMNEAGAEFEDEVLGKSEGKGKEVLSEKITLDSEA back to topmRNA from alignment at CM002455.1:1074716..1075411+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna432 ID=rna432|Name=rna432|organism=Nannochloropsis gaditana|type=mRNA|length=696bp|location=Sequence derived from alignment at CM002455.1:1074716..1075411+ (Nannochloropsis gaditana)
TCGAAAAAGGTGACCAAACACTgatccccccttccctttccgcaCACACC
TTCAGCATAGCGTAGAGTAGAAATTCGCAATCTCGACTGAGTGGCTCTCT
GGCTAAATATGTCATCGAGTAGGCCGACGTCTACAACTACTAGTGGAGTT
GGGTCAAAAGGCGGTCAAAGCAGCAAGCCGAAGTCCGACACCCCATCTAG
TGCAGCACCCGTTCTATCAAAGTGTGATCCAAACATTCCCACGTCGAGCT
CTGATTGTCTGGGGTCTGCAATCCAGCTGCCTCATGGGGAGCCGCAGGGT
CACTTGGCTCGGCAAGACGACCCTGCAAGGTATGTGCGTTCTCTGCTCGA
TGACATGCAGAGTCGCTTCGAAAATATGAGCCAGCAGATTTTAAGCAAAA
TTGATACATTTGGATCCAAGGTCGACGCCCTGGAAGCCGAGATATCGGAG
CTTATGAATGAAGCTGGGGCTGAATTTGAAGACGAAGTGCTGGGGAAGtc
agagggaaaagggaaggaggttctTTCCGAGAAGATAACATTGGACTCTG
AAGCGTGAGTAAGTCGTACCATAGACAGGGCACTTAAATTGTGAAGGTAG
ACAGCTGTTGGGAAAATGTCTGACCCTCTGCCCATGTATGAACGTAGAAG
TTCCGAACGAATACACAGTACAGTAAGAAAAGGCATGGCACTCTGG back to topCoding sequence (CDS) from alignment at CM002455.1:1074716..1075411+ >rna432 ID=rna432|Name=rna432|organism=Nannochloropsis gaditana|type=CDS|length=450bp|location=Sequence derived from alignment at CM002455.1:1074716..1075411+ (Nannochloropsis gaditana)
ATGTCATCGAGTAGGCCGACGTCTACAACTACTAGTGGAGTTGGGTCAAA
AGGCGGTCAAAGCAGCAAGCCGAAGTCCGACACCCCATCTAGTGCAGCAC
CCGTTCTATCAAAGTGTGATCCAAACATTCCCACGTCGAGCTCTGATTGT
CTGGGGTCTGCAATCCAGCTGCCTCATGGGGAGCCGCAGGGTCACTTGGC
TCGGCAAGACGACCCTGCAAGGTATGTGCGTTCTCTGCTCGATGACATGC
AGAGTCGCTTCGAAAATATGAGCCAGCAGATTTTAAGCAAAATTGATACA
TTTGGATCCAAGGTCGACGCCCTGGAAGCCGAGATATCGGAGCTTATGAA
TGAAGCTGGGGCTGAATTTGAAGACGAAGTGCTGGGGAAGtcagagggaa
aagggaaggaggttctTTCCGAGAAGATAACATTGGACTCTGAAGCGTGA back to top
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