EWM30316.1, cds432 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30316.1 vs. NCBI_GenBank
Match: gi|585112975|gb|EWM30316.1| (hsbp1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 300.442 bits (768), Expect = 3.451e-103 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
Query: 1 MSSSRPTSTTTSGVGSKGGQSSKPKSDTPSSAAPVLSKCDPNIPTSSSDCLGSAIQLPHGEPQGHLARQDDPARYVRSLLDDMQSRFENMSQQILSKIDTFGSKVDALEAEISELMNEAGAEFEDEVLGKSEGKGKEVLSEKITLDSEA 149
MSSSRPTSTTTSGVGSKGGQSSKPKSDTPSSAAPVLSKCDPNIPTSSSDCLGSAIQLPHGEPQGHLARQDDPARYVRSLLDDMQSRFENMSQQILSKIDTFGSKVDALEAEISELMNEAGAEFEDEVLGKSEGKGKEVLSEKITLDSEA
Sbjct: 1 MSSSRPTSTTTSGVGSKGGQSSKPKSDTPSSAAPVLSKCDPNIPTSSSDCLGSAIQLPHGEPQGHLARQDDPARYVRSLLDDMQSRFENMSQQILSKIDTFGSKVDALEAEISELMNEAGAEFEDEVLGKSEGKGKEVLSEKITLDSEA 149
BLAST of EWM30316.1 vs. NCBI_GenBank
Match: gi|553184328|ref|XP_005854070.1| (hsbp1-like protein [Nannochloropsis gaditana CCMP526] >gi|422294992|gb|EKU22291.1| hsbp1-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 297.36 bits (760), Expect = 6.394e-102 Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0
Query: 1 MSSSRPTSTTTSGVGSKGGQSSKPKSDTPSSAAPVLSKCDPNIPTSSSDCLGSAIQLPHGEPQGHLARQDDPARYVRSLLDDMQSRFENMSQQILSKIDTFGSKVDALEAEISELMNEAGAEFEDEVLGKSEGKGKEVLSEKITLDSEA 149
MSSSRPTSTTTSGVGSKGGQSSKPKSDTPSSAAPV SKCDPNIPTSSSDCLGSAIQLPHGEPQGHLARQDDPARYVRSLLDDMQSRFENMSQQILSKIDTFGSKVDALEAEISELMNEAGAEFEDEVLGKSEGKGKEVLSEKITLDSEA
Sbjct: 1 MSSSRPTSTTTSGVGSKGGQSSKPKSDTPSSAAPVPSKCDPNIPTSSSDCLGSAIQLPHGEPQGHLARQDDPARYVRSLLDDMQSRFENMSQQILSKIDTFGSKVDALEAEISELMNEAGAEFEDEVLGKSEGKGKEVLSEKITLDSEA 149
BLAST of EWM30316.1 vs. NCBI_GenBank
Match: gi|1199382815|ref|XP_021186001.1| (heat shock factor-binding protein 1 [Helicoverpa armigera]) HSP 1 Score: 62.3882 bits (150), Expect = 3.338e-10 Identity = 32/86 (37.21%), Postives = 54/86 (62.79%), Query Frame = 0
Query: 39 CDPNIPTSSSDCLGSAIQLPHGEPQGHLARQDDPARYVRSLLDDMQSRFENMSQQILSKIDTFGSKVDALEAEISELMNEAGAEFE 124
+ N T+++D + S P +P+ + +YV+SLL +MQ +F++MS QI+++ID G++VD LE I++LM +AG E E
Sbjct: 2 AEQNTDTTTTD-VESTYTAPGNDPKNM----QEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGTRVDELEKNITDLMTQAGVENE 82
BLAST of EWM30316.1 vs. NCBI_GenBank
Match: gi|528258820|gb|EPY37670.1| (hypothetical protein AGDE_06264 [Angomonas deanei] >gi|528268833|gb|EPY40989.1| hypothetical protein AGDE_02936 [Angomonas deanei]) HSP 1 Score: 62.003 bits (149), Expect = 4.861e-10 Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 0
Query: 75 YVRSLLDDMQSRFENMSQQILSKIDTFGSKVDALEAEISELMNEAGAEFEDEVLGKSEGKGK 136
+V+ LL MQSRFE MS I+S+ID G+++D LE I ELM +AG E ED K++GK K
Sbjct: 21 FVQGLLQQMQSRFEEMSNNIISRIDDMGTRIDDLEKSIDELMQQAGTEEED--TPKAKGKKK 80
BLAST of EWM30316.1 vs. NCBI_GenBank
Match: gi|512925699|ref|XP_004930902.1| (heat shock factor-binding protein 1 [Bombyx mori]) HSP 1 Score: 62.003 bits (149), Expect = 4.911e-10 Identity = 27/52 (51.92%), Postives = 40/52 (76.92%), Query Frame = 0
Query: 73 ARYVRSLLDDMQSRFENMSQQILSKIDTFGSKVDALEAEISELMNEAGAEFE 124
+YV+SLL +MQ +F++MS QI+++ID GS+VD LE I++LM +AG E E
Sbjct: 31 TQYVQSLLQNMQDKFQSMSDQIINRIDEMGSRVDELEKNITDLMTQAGVENE 82
BLAST of EWM30316.1 vs. NCBI_GenBank
Match: gi|914568425|gb|KOB72376.1| (Heat Shock Factor binding protein 1 [Operophtera brumata]) HSP 1 Score: 61.2326 bits (147), Expect = 9.247e-10 Identity = 26/51 (50.98%), Postives = 39/51 (76.47%), Query Frame = 0
Query: 74 RYVRSLLDDMQSRFENMSQQILSKIDTFGSKVDALEAEISELMNEAGAEFE 124
+YV+SLL +MQ +F+NMS QI+++ID ++VD LE I++LM +AG E E
Sbjct: 32 QYVQSLLQNMQDKFQNMSDQIINRIDDMSTRVDELEKNITDLMTQAGVENE 82
BLAST of EWM30316.1 vs. NCBI_GenBank
Match: gi|913304573|ref|XP_013201226.1| (PREDICTED: heat shock factor-binding protein 1 isoform X1 [Amyelois transitella] >gi|913304576|ref|XP_013201227.1| PREDICTED: heat shock factor-binding protein 1 isoform X2 [Amyelois transitella]) HSP 1 Score: 61.2326 bits (147), Expect = 9.757e-10 Identity = 26/52 (50.00%), Postives = 40/52 (76.92%), Query Frame = 0
Query: 73 ARYVRSLLDDMQSRFENMSQQILSKIDTFGSKVDALEAEISELMNEAGAEFE 124
+YV+SLL +MQ +F++MS QI+++ID G++VD LE I++LM +AG E E
Sbjct: 31 TQYVQSLLQNMQDKFQSMSDQIINRIDEMGTRVDELEKNITDLMTQAGVENE 82
BLAST of EWM30316.1 vs. NCBI_GenBank
Match: gi|909557790|ref|XP_013133878.1| (PREDICTED: heat shock factor-binding protein 1 [Papilio polytes]) HSP 1 Score: 61.2326 bits (147), Expect = 1.098e-9 Identity = 28/79 (35.44%), Postives = 49/79 (62.03%), Query Frame = 0
Query: 46 SSSDCLGSAIQLPHGEPQGHLARQDDPARYVRSLLDDMQSRFENMSQQILSKIDTFGSKVDALEAEISELMNEAGAEFE 124
++ D + S ++ + P + +YV++LL MQ +F++MS QI+++ID G++VD LE I++LM +AG E E
Sbjct: 4 NNPDSIPSDVENTYNTPANDPKNMQEVTQYVQTLLQTMQDKFQSMSDQIINRIDEMGTRVDELEKNITDLMTQAGVENE 82
BLAST of EWM30316.1 vs. NCBI_GenBank
Match: gi|768444043|ref|XP_011563860.1| (PREDICTED: heat shock factor-binding protein 1 [Plutella xylostella]) HSP 1 Score: 60.8474 bits (146), Expect = 1.327e-9 Identity = 32/86 (37.21%), Postives = 52/86 (60.47%), Query Frame = 0
Query: 39 CDPNIPTSSSDCLGSAIQLPHGEPQGHLARQDDPARYVRSLLDDMQSRFENMSQQILSKIDTFGSKVDALEAEISELMNEAGAEFE 124
DPNI + + + P +P+ + +YV+SLL +MQ +F++MS QI+++ID G++VD LE I++LM +AG E E
Sbjct: 2 ADPNIDAINDE--ENTYNTPANDPKNM----QEVTQYVQSLLQNMQDKFQSMSDQIINRIDEMGTRVDELEKNITDLMTQAGVEGE 81
BLAST of EWM30316.1 vs. NCBI_GenBank
Match: gi|910330118|ref|XP_013168342.1| (PREDICTED: heat shock factor-binding protein 1 [Papilio xuthus] >gi|943958878|ref|XP_014362111.1| PREDICTED: heat shock factor-binding protein 1 [Papilio machaon] >gi|930652298|gb|KPI94638.1| Heat shock factor-binding protein 1 [Papilio xuthus] >gi|930671542|gb|KPJ12254.1| Heat shock factor-binding protein 1 [Papilio machaon]) HSP 1 Score: 60.4622 bits (145), Expect = 1.917e-9 Identity = 28/76 (36.84%), Postives = 47/76 (61.84%), Query Frame = 0
Query: 49 DCLGSAIQLPHGEPQGHLARQDDPARYVRSLLDDMQSRFENMSQQILSKIDTFGSKVDALEAEISELMNEAGAEFE 124
D + S ++ + P + +YV++LL MQ +F++MS QI+++ID G++VD LE I++LM +AG E E
Sbjct: 7 DSIPSDVENTYTTPANDPKNMQEVTQYVQTLLQTMQDKFQSMSDQIINRIDEMGTRVDELEKNITDLMTQAGVENE 82 The following BLAST results are available for this feature:
BLAST of EWM30316.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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