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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100365g2.934.mrna |
| Orig protein id | gnl|cribi|Naga_100365g2.934 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:184794..187157 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4286 ID=rna4286|Name=rna4286|organism=Nannochloropsis gaditana|type=mRNA|length=1321bp
TATGTGCTCTGAGGTAACTTGAACCTTTCCCAGATATCCATGGGAATTAC
AGTACCTGACATCTATCTCTTCACGCCCCACCGACGTCACACAAAGGAAC
GCAGAGCAAAAATCAGAATAGATGCGCTCGCACACATTAAATCTCAGTGC
CCCTTTATTACCCAGCGGGGGGGGGAAATGGAAGTAGAAAGCAGCACGCT
TTGAGCGACGTCACTGTTTACTAACCAGCTTTGAACCCTGGCGCGCATTA
TCCCGCACTGACCGTCTCACCACATTTTGGAGCCCCCTCTCACCGTCTTC
CACGGACACGGGATTTTTTCCCAGTGTAGGGGGTTGAGTGTTGCGGAGGT
ATGCTCGTTGACGTTGCATGTTTGCATTTCAGGCCGCGATGCCTAACGTG
TCGGTCGTCATCATCTTTCGAATTTTATTTTGACAATTTTCGCCTCTCAC
GTCGGAGCATTGCCCAACTAGGATACACGCCCAATTTTTGTTAAGGGACA
AATGAACTTGGAAAGCGGCTTGGGGCCGGGCGCTAGCTCTTCGTCTTCGA
GCGGGCCCGCCGCTTTTGCTACCTCGTCCTCCTCCAATTTTATGGACAGC
GCCCGCCGTCTGCTGGGAGTGGAAGCACGACCTAAAACCTTCTGCGAACG
CCTGGAAGAAGATATGTGCTGGTGGTGCCCGACCTTGACCTGGCAGCAAC
GTCTCTTTGGCTGCTTGTGCTGCTTCCTTGTGGGTATGATCCTGGAGTTC
GGTTCCTTCTTCCGCTTCACTAAACTCCTGACCGGCCACCCAGAGCCCTT
TGCGGTCATGTACACGATCGGCAACCTCATCTCCCTGGCCGGTTCCTGCT
TCCTCTCCGGGCCCTTCTCGCAGGTCAAGTCCATGTTTCACCCCACCCGC
GCGGTTTGCACCAGTGTGTACGTCCTCACTCTGGTGTTCACCCTCCTCAT
CGCCTTCTCCGACGTGCCCGGGCAAGGCCCCCTGTTGGTCTTGATGATCA
TCGTTCAATTCTTGTCCCTGTCCTACTACATCCTCTCATACATCCCCTTC
GCCCGGCAGATGGTGTGGCAGACGTGTGGGAGTTGTCTGGGCCTAGGGGA
GGCGGGGTCCTATGGATGAAGGGGGGTTAGAGGGGCACGTGTGCAGAGAG
CACGGATGTTGAGGCGCGGAAAGCGTGTACATACCACAGACAGTAAAAAA
GCAACCATCTTTGTCATGCGCGCTGAGGACGGGGAGGGGGGGGGGGGAGG
TTCAGAAACACCGCCCGGCCCACTGCCTTGCTCCAGGTTCGCTCAGACCT
TATAAGCCATACCAGGCATGA back to topprotein sequence of rna4286 >rna4286-protein ID=rna4286-protein|Name=rna4286|organism=Nannochloropsis gaditana|type=polypeptide|length=402bp
MVCTSTIVPPNPTAMPSTWPASRIRNSRVRLPLLASCVGVLALAASRAAY
AYLPSHSFFFSSSSSSLVASFSSSPRIKRRHPAALQMRMKPSGEERERGL
AEKDLREKHSQVLLSQRIQHIRRLRASRREDVMATEWYCPTKPNPDWRYA
AEGERPRGEGREAAAMDELTAMLDYHAERGAGGSVVNVYAKEEEAAEAFA
QKLGGSLAAFDRVTQASGVPGGVPPPVPLSSVASTPAVVGRALKRHDYAP
LAVWRCLRRWAGNAEGEPCTYNGIRGTGKYVVILVDPNLAATTLVEGLNR
MRIIPSSLAAVVGVTPLSCPELARLAKKAGLTATGASTSTYLLSDTSYSW
MDAYGLPRLSLRPWLLILDGSTGMVLSVKRDPTPGTLNDAVMEVVGDWRG
KR back to topmRNA from alignment at CM002463.1:184794..187157+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4286 ID=rna4286|Name=rna4286|organism=Nannochloropsis gaditana|type=mRNA|length=2364bp|location=Sequence derived from alignment at CM002463.1:184794..187157+ (Nannochloropsis gaditana)
CCCCCCGCGTATGCCGTAGCCGCGGTGCCATTGAGACGCAGCCTGGTTGA
GATGAGTGGGAAATGACGGCATGAATTGTGCGTTTCAAGGCAATTTGAAA
TGCGGGAGCACCGGGCTCAAGAAGGTTGATTGTGTGCACGCTTTCAATTT
CGATGTCCCAAGTGCTATCGAGAGACTTGTGAATGTGTGGGCAAACCGAG
CTGTTTTTAAGGTCCGAAAGAGTCGCAGAAACTCGCTTGATGGACCCACA
GTACATTGAATGTTTCGTGGCTCGATGCGCACACACGTCTtcaccctttc
cctttctgaaaaacctccctccctccgacaaAAGTCATGGTATGCACATC
AACCATTGTCCCCCCGAACCCCACAGCGATGCCATCGACATGGCCAGCAA
GTCGCATCAGGAATAGCCGCGTCCGTCTTCCGCTCCTTGCTTCCTGTGTG
GGTGTACTGGCGTTGGCCGCTTCGCGAGCTGCTTATGCCTACCTCCCGTC
CCACTcgtttttcttctcctcctcctcctcctcccttgttgcctcctttt
cttcctcccctcgaaTTAAGCGTCGGCATCCCGCCGCTCTTCAAATGCGC
ATGAAGCCGTCGGGCGAGGAGCGGGAACGTGGCTTGGCAGAGAAGGACTT
GCGGGAGAAGCACAGTcaggtcctcctctctcaacgCATCCAGCACATAC
GCCGTCTCCGAGCCTCCCGCCGGGAAGACGTGATGGCTACGGAGTGGTAC
TGTCCGACAAAGCCCAATCCGGACTGGCGGTAtgcggcggagggagaaag
accacggggggaggggcgggaggcagcggcAATGGATGAATTGACTGCCA
TGTTGGACTACCACGCGGaacggggggcggggggaagcgtCGTGAACGTG
tacgccaaggaggaggaagccgcggaAGCTTTTGCGCAAAAATTGGGTGG
CAGTTTGGCCGCATTTGACCGCGTGACCCAGGCTTCCGGAGTGCCCGGCG
gggttcctcctcctgtgcccTTGAGCTCCGTCGCGAGCACCCCGGCAGTT
GTAGGCAGGGCCCTCAAACGACACGACTACGCGCCCTTGGCCGTGTGGAG
GTGTCTGAGACGGTGGGCAGGGAACGCGGAGGGGGAACCCTGCACCTACA
ACGGGAtcagggtgagagggagggcgggcgggagggcgggcgggagggcg
ggcgggagagagaacGGGTACGCGCTGGCGTGtcaaaagggagggagtcg
gacgcggggatggaggggtgtGGGAAGGATGGACGAGGCGATGGTTGCGG
TGCTCACGCAGCCATTACCCCTTGGCCCTTTTTTCGCCTCTAACACCCAC
CCAGGGCACTGGCAAGTACGTGGTAATTCTCGTGGATCCGAACCTTGCGG
CCACCACGCTGGTGGAAGGTCTAAACAGGATGCGGATCATCCCTTCGTCC
TTGGCCGCAGTAGTGGGGGTCACTCCTCTTTCATGTCCCGAGCTCGCGCG
ATTGGCGAAGAAAGCCGGGCTGACAGCGACcggcgccagcacctccacgt
ACCTTTTGAGCGACACTTCCTATAGCTGGATGGACGCGTacggccttcct
cgcctctccctccggccctggcTCTTGATTTTAGACGGCAGCACAGGGAT
GGTTTTGAGCGTGAAGCGAGACCCAACGCCAGGAACCTTGAACGATGCCG
TCATGGAAGTCGTGGGGGACTGGCGGGGTAAAAGGTGACCCAATGGTGCC
CAGAAGGTGGATGACAGAGTCGTAAAAAGAAAATGCTTGTACATGATCAT
CCCAAAGTCGGTGGGGCCTTCACAAGTATTATTTTGCGGGTGATTGGATA
GTCCCCTCGAGTGTGCGGGCCGCCACTCGTCCAGCATGTCCTTCGGTTCG
GTGCATGCTTTGTTTTATACTGGGAGGTGAACAAAATTTTATCGTCGCAA
CGACTCGTACTCTATGAGGCCCTAGCTTAGCTTACCGGAAGATCGGAACA
CCAACCTCCTGCATAACGCGATTCCCAAACACCCCTACAATATTATCGTA
GGGGAGACATGAAGTTTAACGTATCTGACATGTCTTTTGCATAGTAATTT
TAAAGATTTTTATATCGTGGGATGTCTTGGATCCAACTTACGGGCAACTT
TGCCCTCTGTCCACCTGAGCGAACATGGAACGGATGACGTCCGTGTTGTA
CTTGTCATACCAGTAATTTTAGGGCTTCACAAAGAACACGCTCACAGTGG
AGAACGGAAGATGTTCGTGATTGTGCTAGCATCTTACATTCGTGCTACTT
TTTCGAGGTAATTGTAAAGTCTTGATATCTTTAACACAGTTTACTATGTT
TTTTTCCTGCGGTG back to topCoding sequence (CDS) from alignment at CM002463.1:184794..187157+ >rna4286 ID=rna4286|Name=rna4286|organism=Nannochloropsis gaditana|type=CDS|length=2418bp|location=Sequence derived from alignment at CM002463.1:184794..187157+ (Nannochloropsis gaditana)
ATGGTATGCACATCAACCATTGTCCCCCCGAACCCCACAGCGATGCCATC
GACATGGCCAGCAAGTCGCATCAGGAATAGCCGCGTCCGTCTTCCGCTCC
TTGCTTCCTGTGTGGGTGTACTGGCGTTGGCCGCTTCGCGAGCTGCTTAT
GCCTACCTCCCGTCCCACTcgtttttcttctcctcctcctcctcctccct
tgttgcctccttttcttcctcccctcgaaTTAAGCGTCGGCATCCCGCCG
CTCTTCAAATGCGCATGAAGCCGTCGGGCGAGGAGCGGGAACGTGGCTTG
GCAGAGAAGGACTTGCGGGAGAAGCACAGTcaggtcctcctctctcaacg
CATCCAGCACATACGCCGTCTCCGAGCCTCCCGCCGGGAAGACGTGATGG
CTACGGAGTGGTACTGTCCGACAAAGCCCAATCCGGACTGGCGGTAtgcg
gcggagggagaaagaccacggggggaggggcgggaggcagcggcAATGGA
TGAATTGACTGCCATGTTGGACTACCACGCGGaacggggggcggggggaa
gcgtCGTGAACGTGtacgccaaggaggaggaagccgcggaAGCTTTTGCG
CAAAAATTGGGTGGCAGTTTGGCCGCATTTGACCGCGTGACCCAGGCTTC
CGGAGTGCCCGGCGgggttcctcctcctgtgcccTTGAGCTCCGTCGCGA
GCACCCCGGCAGTTGTAGGCAGGGCCCTCAAACGACACGACTACGCGCCC
TTGGCCGTGTGGAGGTGTCTGAGACGGTGGGCAGGGAACGCGGAGGGGGA
ACCCTGCACCTACAACGGGAtcaggGGCACTGGCAAGTACGTGGTAATTC
TCGTGGATCCGAACCTTGCGGCCACCACGCTGGTGGAAGGTCTAAACAGG
ATGCGGATCATCCCTTCGTCCTTGGCCGCAGTAGTGGGGGTCACTCCTCT
TTCATGTCCCGAGCTCGCGCGATTGGCGAAGAAAGCCGGGCTGACAGCGA
CcggcgccagcacctccacgtACCTTTTGAGCGACACTTCCTATAGCTGG
ATGGACGCGTacggccttcctcgcctctccctccggccctggcTCTTGAT
TTTAGACGGCAGCACAGGGATGGTTTTGAGCGTGAAGCGAGACCCAACGC
CAGGAACCTTGAACGATGCCGTCATGGAAGTCGTGGGGGACTGGCGGGGT
AAAAGGTGAATGGTATGCACATCAACCATTGTCCCCCCGAACCCCACAGC
GATGCCATCGACATGGCCAGCAAGTCGCATCAGGAATAGCCGCGTCCGTC
TTCCGCTCCTTGCTTCCTGTGTGGGTGTACTGGCGTTGGCCGCTTCGCGA
GCTGCTTATGCCTACCTCCCGTCCCACTcgtttttcttctcctcctcctc
ctcctcccttgttgcctccttttcttcctcccctcgaaTTAAGCGTCGGC
ATCCCGCCGCTCTTCAAATGCGCATGAAGCCGTCGGGCGAGGAGCGGGAA
CGTGGCTTGGCAGAGAAGGACTTGCGGGAGAAGCACAGTcaggtcctcct
ctctcaacgCATCCAGCACATACGCCGTCTCCGAGCCTCCCGCCGGGAAG
ACGTGATGGCTACGGAGTGGTACTGTCCGACAAAGCCCAATCCGGACTGG
CGGTAtgcggcggagggagaaagaccacggggggaggggcgggaggcagc
ggcAATGGATGAATTGACTGCCATGTTGGACTACCACGCGGaacgggggg
cggggggaagcgtCGTGAACGTGtacgccaaggaggaggaagccgcggaA
GCTTTTGCGCAAAAATTGGGTGGCAGTTTGGCCGCATTTGACCGCGTGAC
CCAGGCTTCCGGAGTGCCCGGCGgggttcctcctcctgtgcccTTGAGCT
CCGTCGCGAGCACCCCGGCAGTTGTAGGCAGGGCCCTCAAACGACACGAC
TACGCGCCCTTGGCCGTGTGGAGGTGTCTGAGACGGTGGGCAGGGAACGC
GGAGGGGGAACCCTGCACCTACAACGGGAtcaggGGCACTGGCAAGTACG
TGGTAATTCTCGTGGATCCGAACCTTGCGGCCACCACGCTGGTGGAAGGT
CTAAACAGGATGCGGATCATCCCTTCGTCCTTGGCCGCAGTAGTGGGGGT
CACTCCTCTTTCATGTCCCGAGCTCGCGCGATTGGCGAAGAAAGCCGGGC
TGACAGCGACcggcgccagcacctccacgtACCTTTTGAGCGACACTTCC
TATAGCTGGATGGACGCGTacggccttcctcgcctctccctccggccctg
gcTCTTGATTTTAGACGGCAGCACAGGGATGGTTTTGAGCGTGAAGCGAG
ACCCAACGCCAGGAACCTTGAACGATGCCGTCATGGAAGTCGTGGGGGAC
TGGCGGGGTAAAAGGTGA back to top
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