EWM26398.1, cds4276 (CDS) Nannochloropsis gaditana

Overview
NameEWM26398.1
Unique Namecds4276
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:185130..185954 +
Alignment locationCM002463.1:186148..186531 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26398.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100365g2.934.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:185130..185954 +
CM002463.1supercontigCM002463.1:186148..186531 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26398.1 vs. NCBI_GenBank
Match: gi|585108415|gb|EWM26398.1| (hypothetical protein Naga_100365g2 [Nannochloropsis gaditana])

HSP 1 Score: 813.527 bits (2100), Expect = 0.000e+0
Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 0 
Query:    1 MVCTSTIVPPNPTAMPSTWPASRIRNSRVRLPLLASCVGVLALAASRAAYAYLPSHSFFFSSSSSSLVASFSSSPRIKRRHPAALQMRMKPSGEERERGLAEKDLREKHSQVLLSQRIQHIRRLRASRREDVMATEWYCPTKPNPDWRYAAEGERPRGEGREAAAMDELTAMLDYHAERGAGGSVVNVYAKEEEAAEAFAQKLGGSLAAFDRVTQASGVPGGVPPPVPLSSVASTPAVVGRALKRHDYAPLAVWRCLRRWAGNAEGEPCTYNGIRGTGKYVVILVDPNLAATTLVEGLNRMRIIPSSLAAVVGVTPLSCPELARLAKKAGLTATGASTSTYLLSDTSYSWMDAYGLPRLSLRPWLLILDGSTGMVLSVKRDPTPGTLNDAVMEVVGDWRGKR 402
            MVCTSTIVPPNPTAMPSTWPASRIRNSRVRLPLLASCVGVLALAASRAAYAYLPSHSFFFSSSSSSLVASFSSSPRIKRRHPAALQMRMKPSGEERERGLAEKDLREKHSQVLLSQRIQHIRRLRASRREDVMATEWYCPTKPNPDWRYAAEGERPRGEGREAAAMDELTAMLDYHAERGAGGSVVNVYAKEEEAAEAFAQKLGGSLAAFDRVTQASGVPGGVPPPVPLSSVASTPAVVGRALKRHDYAPLAVWRCLRRWAGNAEGEPCTYNGIRGTGKYVVILVDPNLAATTLVEGLNRMRIIPSSLAAVVGVTPLSCPELARLAKKAGLTATGASTSTYLLSDTSYSWMDAYGLPRLSLRPWLLILDGSTGMVLSVKRDPTPGTLNDAVMEVVGDWRGKR
Sbjct:    1 MVCTSTIVPPNPTAMPSTWPASRIRNSRVRLPLLASCVGVLALAASRAAYAYLPSHSFFFSSSSSSLVASFSSSPRIKRRHPAALQMRMKPSGEERERGLAEKDLREKHSQVLLSQRIQHIRRLRASRREDVMATEWYCPTKPNPDWRYAAEGERPRGEGREAAAMDELTAMLDYHAERGAGGSVVNVYAKEEEAAEAFAQKLGGSLAAFDRVTQASGVPGGVPPPVPLSSVASTPAVVGRALKRHDYAPLAVWRCLRRWAGNAEGEPCTYNGIRGTGKYVVILVDPNLAATTLVEGLNRMRIIPSSLAAVVGVTPLSCPELARLAKKAGLTATGASTSTYLLSDTSYSWMDAYGLPRLSLRPWLLILDGSTGMVLSVKRDPTPGTLNDAVMEVVGDWRGKR 402
The following BLAST results are available for this feature:
BLAST of EWM26398.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108415|gb|EWM26398.1|0.000e+0100.00hypothetical protein Naga_100365g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4286rna4286Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications