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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100365g4.937.mrna |
| Orig protein id | gnl|cribi|Naga_100365g4.937 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:179767..181314 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4284 ID=rna4284|Name=rna4284|organism=Nannochloropsis gaditana|type=mRNA|length=1488bp
ATGGTCTGGTTGAACCAGGGCACTGTCTGTCAAACAAAGCCAACCACCCG
ACACGATACCTTTGACAGCGTCATGAAGCCCTCCCTCGCCCTCCCGAGTC
TTTTGGCAACGCTCCACTTCCTCTTTCTCCTTCCGCCCTCCTCACCCTCT
GCATGGGATCCACATCCCTGGCCATCAACTCCTCCGTATGTGGAAGGCTG
GTATGTGCGCCTCTCAGGTCTGGAGACTGGCGATTCCATTGCCCTTATTT
TCGGTGCCTCCCTCCTCCCGCCTGCCCCTCCTCCCTCTCTCCCTCCTGTC
TATCTGGCCATCCTCCATGGCGATGTCTTGACCAACAAGACTGTTGTGTA
CGAAAGCACGCCACCGTTGGAGGCGGTGGAGATACGGCAGAAGAACGGCC
AGCCCGTCACAGAGGCTGTCGATTGGAAGGCTCCTCCGGGATTCACTTGG
CGGGTGATAGATGAAGCAGAGGATGGAGCCGCAAGGCAGGCGCCCCAGGG
CAGCAAAAGCACGACTTCTTCCTTCTCTCCCGAGGCGTCTTCCTCCATGA
ACGCCATTCAAAGGGCTCGCCACTTGTTCCTCCGAGTGACCCTCCCCACG
GCCGCCTTCTGGGCCCAGATCGACATCCCTCCCTGGAAGTACGACGGTCC
CCCGCGTCCTCACTCGTGGACCGACGTCGTGGACGCTGTCCCCTTACACT
GGTACATTCATTCCCTCTCTTCCCGGGTCGTGTACGCCCGCTTGGAGTTG
AAAGAGGAGGGGAGGCAGGAGGGGGGGAGGGCGGTGGAGGGGAAGGGAGG
AGGGAGGGGAAAGAGGATAATCGAAAGTCACAGAGGACAGGTGCATTTGG
AGAAGAATTGGGGTAGACGCTTTCCCGATGCATGGCTTTGGTCCCAGGGC
GTGGCATCGCTCCCTCTCTCTGACCCGTCCTCCTCCCCCTCCCCCTCGAC
CTCCCCCTCGACCTCGTCCACCCGGAATGCTTCCTCCATCGCCTTCGTCT
TCTCCTATGGGCAGGTCACCCCGGGGGTCTTTACCCATTTCGCGCATTTT
CGTGACCAAGACCTGGGTCTAGCTTGGGATTTCAAGCCGAGCTCCTCGGT
CTTGGTGGAGGAGAGCGTGGAGGGATGCCAAGGTCGGGCCCGCTTCGTCC
TGGAGGGGTGGGGAGCGGAGGAGCAGGAGGGCGGGGGGGGGGACGGGGAG
GCGTTCCATCCTTCCCTCGCTCCTCGTTCTCAGGGCCGTAGACGGTTGAG
CTTGGAGCTGGTCAAGCCCAGGGGTTCGTCGGCGTGTCTGCTGGGACCGA
CCGGGACAGGATTTGAACGTTTGTGCGAGGAATCGTTCCAGGGGGAGGCG
CGGGTGGAGGCAGCGAAGGAGGGGGGAAAGGAGGGAGGTTGGCGCGTGAG
ACAGTGGAGGCGTGTCCTACCAATCGCGCCGTCGTTGTGCATGGATAGCA
GGGTAAGAAACCTTGTAATGGAGTGTAAAGAGCTGTGA back to topprotein sequence of rna4284 >rna4284-protein ID=rna4284-protein|Name=rna4284|organism=Nannochloropsis gaditana|type=polypeptide|length=256bp
MKISRFLFISLVPMMARSTSMGDRRRRCPAFSFLGLTLPAIPDLQMPTSP
IEVKLVYQRVLDPIHYGDYCGPTPEITPDTGCRHPLNLAALDDTDEICRL
HDHFYCKCDSVYHRQGKSPPSSALIATRSLSADFRKTYFANLDKDYYMCV
HEADQEMLGKFDTLVSEGRLPPSYWDPLTRWKFDSLLDVFRRNMAVDAEI
LDLQAQDGRERGRAYWFEEDADAHAVKQGPGDDVPPARSEGKGSQVVTAA
ATSMTH back to topmRNA from alignment at CM002463.1:179767..181314- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4284 ID=rna4284|Name=rna4284|organism=Nannochloropsis gaditana|type=mRNA|length=1548bp|location=Sequence derived from alignment at CM002463.1:179767..181314- (Nannochloropsis gaditana)
ATGAAAATCTCTAGGTTTCTCTTCATCTCCTTGGTGCCTATGATGGCCAG
GAGCACGTCGATGGGAGACAGGAGACGACGCTGCCCTGCTTTTAGCTTTC
TCGGGCTCACGCTACCAGCCATTCCAGACCTGCAAATGCCGACTTCACCC
ATCGAGGTGAAGTTGGTGTATCAGCGCGTCCTCGATCCAATGTACGTAGG
TTTGTTTTGAGAGCTCCATGTCCGAGGGAATATTTCTCTCCACGGAGCCC
CGGCATGAGGGATGTGGGGAATCGACCATTAATCTTTGCCTTCTCCTCTT
CACGCTCGTATATATCAGACATTATGGTGACTACTGTGGACCCACACCCG
AGGTAATTTTACGGCCTATTCTTCCCCTCCTTCTCCCTCTCCTTGTTCCC
CTAACCTCCCGACTTTCCTCCCCTCTTTTACAGATCACCCCGGACACCGG
CTGTCGCCATCCCCTCAACCTGGCTGCCTTGGACGACACGGATGAGATCT
GCCGGCTGCACGATCATTTCTATTGCAAATGTGATAGCGTGTACCACAGG
TATGGATGATCCCTCGTGTTGTCTATGGACGGAGGGAAAGACCTTGAAGG
GGGAGGAAGAGGGCAGAAGGTGACGTATCCTGATTTGCTGCTATCACCAC
CTTAGCATCGACAGTCTTTCACTTCTTCTGTCGCGGTCCTTGCGTGGAAG
TCATGAGTCATGTTGTCCCACGTCTGTCTCCTCTTTTCTTCCTGCCATAA
TTCCCAGGCAGGGCAAAAGCCCTCCCTCCTCCGCCCTGATCGCCACACGC
TCCCTCTCCGCCGACTTTCGAAAGACGTACTTCGCCAATCTGGACAAGGA
CTATTACATGTGCGTGCACGAGGCGGATCAGGAAATGCTGGGAAAATTCG
ATACTTTGGTGTCTGAGGGTAAGTAGGGGAAGGAAGGAGGCAGGCAGGGA
AGGAAGGGACATGAAAGGCAGACGATGGGAGGAAAGGCGACACAATGCCG
GTGGGTGGCAGTACATAAAAAGCATCCAAGGCGTGTGGACGTTCCATCCT
CCTTCCTGACTGGGGGTTCGCGTCCAGCTCTCCGGCGTCGTCTGTATACC
CCACTCTAACTCGACCCCCCGCGGCCCATTATCCCATCCCCGTTGTGCCG
CTCTCTCTCTCCCTTCCCCGTGTCCCCAGGGCGCCTCCCTCCCTCCTACT
GGGACCCTTTGACTCGCTGGAAGTTCGATTCTCTCCTGGATGTTTTCCGG
CGCAACATGGCTGTGGACGCAGAGATCCTGGACCTGGTAAGCGGGTGGGG
GATAATGGCGCGAACGGGAAAGAAGCCCCTGTCGGGACGGACGCTTGGAA
GCGACTCATTTCGATCAACGTGTATCGGCTCCACAGCAAGCGCAAGATGG
CCGGGAAAGAGGAAGAGCATACTGGTTCGAGGAGGACGCGGACGCGCATG
CGGTGAAGCAAGGGCCTGGGGATGACGTGCCCCCTGCGCGGAGTGAAGGC
AAGGGTTCGCAAGTAGTGACAGCTGCTGCAACGTCGATGACGCATTAA back to topCoding sequence (CDS) from alignment at CM002463.1:179767..181314- >rna4284 ID=rna4284|Name=rna4284|organism=Nannochloropsis gaditana|type=CDS|length=4626bp|location=Sequence derived from alignment at CM002463.1:179767..181314- (Nannochloropsis gaditana)
CAAGCGCAAGATGGCCGGGAAAGAGGAAGAGCATACTGGTTCGAGGAGGA
CGCGGACGCGCATGCGGTGAAGCAAGGGCCTGGGGATGACGTGCCCCCTG
CGCGGAGTGAAGGCAAGGGTTCGCAAGTAGTGACAGCTGCTGCAACGTCG
ATGACGCATTAAGGCGCCTCCCTCCCTCCTACTGGGACCCTTTGACTCGC
TGGAAGTTCGATTCTCTCCTGGATGTTTTCCGGCGCAACATGGCTGTGGA
CGCAGAGATCCTGGACCTGGCAGGGCAAAAGCCCTCCCTCCTCCGCCCTG
ATCGCCACACGCTCCCTCTCCGCCGACTTTCGAAAGACGTACTTCGCCAA
TCTGGACAAGGACTATTACATGTGCGTGCACGAGGCGGATCAGGAAATGC
TGGGAAAATTCGATACTTTGGTGTCTGAGGATCACCCCGGACACCGGCTG
TCGCCATCCCCTCAACCTGGCTGCCTTGGACGACACGGATGAGATCTGCC
GGCTGCACGATCATTTCTATTGCAAATGTGATAGCGTGTACCACAGACAT
TATGGTGACTACTGTGGACCCACACCCGAGATGAAAATCTCTAGGTTTCT
CTTCATCTCCTTGGTGCCTATGATGGCCAGGAGCACGTCGATGGGAGACA
GGAGACGACGCTGCCCTGCTTTTAGCTTTCTCGGGCTCACGCTACCAGCC
ATTCCAGACCTGCAAATGCCGACTTCACCCATCGAGGTGAAGTTGGTGTA
TCAGCGCGTCCTCGATCCAATCAAGCGCAAGATGGCCGGGAAAGAGGAAG
AGCATACTGGTTCGAGGAGGACGCGGACGCGCATGCGGTGAAGCAAGGGC
CTGGGGATGACGTGCCCCCTGCGCGGAGTGAAGGCAAGGGTTCGCAAGTA
GTGACAGCTGCTGCAACGTCGATGACGCATTAAGGCGCCTCCCTCCCTCC
TACTGGGACCCTTTGACTCGCTGGAAGTTCGATTCTCTCCTGGATGTTTT
CCGGCGCAACATGGCTGTGGACGCAGAGATCCTGGACCTGGCAGGGCAAA
AGCCCTCCCTCCTCCGCCCTGATCGCCACACGCTCCCTCTCCGCCGACTT
TCGAAAGACGTACTTCGCCAATCTGGACAAGGACTATTACATGTGCGTGC
ACGAGGCGGATCAGGAAATGCTGGGAAAATTCGATACTTTGGTGTCTGAG
GATCACCCCGGACACCGGCTGTCGCCATCCCCTCAACCTGGCTGCCTTGG
ACGACACGGATGAGATCTGCCGGCTGCACGATCATTTCTATTGCAAATGT
GATAGCGTGTACCACAGACATTATGGTGACTACTGTGGACCCACACCCGA
GATGAAAATCTCTAGGTTTCTCTTCATCTCCTTGGTGCCTATGATGGCCA
GGAGCACGTCGATGGGAGACAGGAGACGACGCTGCCCTGCTTTTAGCTTT
CTCGGGCTCACGCTACCAGCCATTCCAGACCTGCAAATGCCGACTTCACC
CATCGAGGTGAAGTTGGTGTATCAGCGCGTCCTCGATCCAATCAAGCGCA
AGATGGCCGGGAAAGAGGAAGAGCATACTGGTTCGAGGAGGACGCGGACG
CGCATGCGGTGAAGCAAGGGCCTGGGGATGACGTGCCCCCTGCGCGGAGT
GAAGGCAAGGGTTCGCAAGTAGTGACAGCTGCTGCAACGTCGATGACGCA
TTAAGGCGCCTCCCTCCCTCCTACTGGGACCCTTTGACTCGCTGGAAGTT
CGATTCTCTCCTGGATGTTTTCCGGCGCAACATGGCTGTGGACGCAGAGA
TCCTGGACCTGGCAGGGCAAAAGCCCTCCCTCCTCCGCCCTGATCGCCAC
ACGCTCCCTCTCCGCCGACTTTCGAAAGACGTACTTCGCCAATCTGGACA
AGGACTATTACATGTGCGTGCACGAGGCGGATCAGGAAATGCTGGGAAAA
TTCGATACTTTGGTGTCTGAGGATCACCCCGGACACCGGCTGTCGCCATC
CCCTCAACCTGGCTGCCTTGGACGACACGGATGAGATCTGCCGGCTGCAC
GATCATTTCTATTGCAAATGTGATAGCGTGTACCACAGACATTATGGTGA
CTACTGTGGACCCACACCCGAGATGAAAATCTCTAGGTTTCTCTTCATCT
CCTTGGTGCCTATGATGGCCAGGAGCACGTCGATGGGAGACAGGAGACGA
CGCTGCCCTGCTTTTAGCTTTCTCGGGCTCACGCTACCAGCCATTCCAGA
CCTGCAAATGCCGACTTCACCCATCGAGGTGAAGTTGGTGTATCAGCGCG
TCCTCGATCCAATCAAGCGCAAGATGGCCGGGAAAGAGGAAGAGCATACT
GGTTCGAGGAGGACGCGGACGCGCATGCGGTGAAGCAAGGGCCTGGGGAT
GACGTGCCCCCTGCGCGGAGTGAAGGCAAGGGTTCGCAAGTAGTGACAGC
TGCTGCAACGTCGATGACGCATTAAGGCGCCTCCCTCCCTCCTACTGGGA
CCCTTTGACTCGCTGGAAGTTCGATTCTCTCCTGGATGTTTTCCGGCGCA
ACATGGCTGTGGACGCAGAGATCCTGGACCTGGCAGGGCAAAAGCCCTCC
CTCCTCCGCCCTGATCGCCACACGCTCCCTCTCCGCCGACTTTCGAAAGA
CGTACTTCGCCAATCTGGACAAGGACTATTACATGTGCGTGCACGAGGCG
GATCAGGAAATGCTGGGAAAATTCGATACTTTGGTGTCTGAGGATCACCC
CGGACACCGGCTGTCGCCATCCCCTCAACCTGGCTGCCTTGGACGACACG
GATGAGATCTGCCGGCTGCACGATCATTTCTATTGCAAATGTGATAGCGT
GTACCACAGACATTATGGTGACTACTGTGGACCCACACCCGAGATGAAAA
TCTCTAGGTTTCTCTTCATCTCCTTGGTGCCTATGATGGCCAGGAGCACG
TCGATGGGAGACAGGAGACGACGCTGCCCTGCTTTTAGCTTTCTCGGGCT
CACGCTACCAGCCATTCCAGACCTGCAAATGCCGACTTCACCCATCGAGG
TGAAGTTGGTGTATCAGCGCGTCCTCGATCCAATCAAGCGCAAGATGGCC
GGGAAAGAGGAAGAGCATACTGGTTCGAGGAGGACGCGGACGCGCATGCG
GTGAAGCAAGGGCCTGGGGATGACGTGCCCCCTGCGCGGAGTGAAGGCAA
GGGTTCGCAAGTAGTGACAGCTGCTGCAACGTCGATGACGCATTAAGGCG
CCTCCCTCCCTCCTACTGGGACCCTTTGACTCGCTGGAAGTTCGATTCTC
TCCTGGATGTTTTCCGGCGCAACATGGCTGTGGACGCAGAGATCCTGGAC
CTGGCAGGGCAAAAGCCCTCCCTCCTCCGCCCTGATCGCCACACGCTCCC
TCTCCGCCGACTTTCGAAAGACGTACTTCGCCAATCTGGACAAGGACTAT
TACATGTGCGTGCACGAGGCGGATCAGGAAATGCTGGGAAAATTCGATAC
TTTGGTGTCTGAGGATCACCCCGGACACCGGCTGTCGCCATCCCCTCAAC
CTGGCTGCCTTGGACGACACGGATGAGATCTGCCGGCTGCACGATCATTT
CTATTGCAAATGTGATAGCGTGTACCACAGACATTATGGTGACTACTGTG
GACCCACACCCGAGATGAAAATCTCTAGGTTTCTCTTCATCTCCTTGGTG
CCTATGATGGCCAGGAGCACGTCGATGGGAGACAGGAGACGACGCTGCCC
TGCTTTTAGCTTTCTCGGGCTCACGCTACCAGCCATTCCAGACCTGCAAA
TGCCGACTTCACCCATCGAGGTGAAGTTGGTGTATCAGCGCGTCCTCGAT
CCAATCAAGCGCAAGATGGCCGGGAAAGAGGAAGAGCATACTGGTTCGAG
GAGGACGCGGACGCGCATGCGGTGAAGCAAGGGCCTGGGGATGACGTGCC
CCCTGCGCGGAGTGAAGGCAAGGGTTCGCAAGTAGTGACAGCTGCTGCAA
CGTCGATGACGCATTAAGGCGCCTCCCTCCCTCCTACTGGGACCCTTTGA
CTCGCTGGAAGTTCGATTCTCTCCTGGATGTTTTCCGGCGCAACATGGCT
GTGGACGCAGAGATCCTGGACCTGGCAGGGCAAAAGCCCTCCCTCCTCCG
CCCTGATCGCCACACGCTCCCTCTCCGCCGACTTTCGAAAGACGTACTTC
GCCAATCTGGACAAGGACTATTACATGTGCGTGCACGAGGCGGATCAGGA
AATGCTGGGAAAATTCGATACTTTGGTGTCTGAGGATCACCCCGGACACC
GGCTGTCGCCATCCCCTCAACCTGGCTGCCTTGGACGACACGGATGAGAT
CTGCCGGCTGCACGATCATTTCTATTGCAAATGTGATAGCGTGTACCACA
GACATTATGGTGACTACTGTGGACCCACACCCGAGATGAAAATCTCTAGG
TTTCTCTTCATCTCCTTGGTGCCTATGATGGCCAGGAGCACGTCGATGGG
AGACAGGAGACGACGCTGCCCTGCTTTTAGCTTTCTCGGGCTCACGCTAC
CAGCCATTCCAGACCTGCAAATGCCGACTTCACCCATCGAGGTGAAGTTG
GTGTATCAGCGCGTCCTCGATCCAAT back to top
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